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Cholecystitis

Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A

Type
Disease or Syndrome
ID
PH134
Version ID
268
Valid event data range
01/01/1999 - 01/07/2016
Sex
Female, Male
Agreement Date
2019-05-20
Coding system
Read codes v2 ICD10 codes Med codes
Tags /Collections
CALIBER Phenotype Library

Definition

At the specified date, a patient is defined as having had 'Cholecystitis' IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:

Primary care

  1. 'Cholecystitis' diagnosis or history of diagnosis or procedure during a consultation

OR Secondary care

  1. ALL diagnoses of 'Cholecystitis' or history of diagnosis during a hospitalization

Implementation


Publications

  • Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3

Clinical Code List

Rows: 22
Code Description Disease Medcode Category
J643.00 Bile duct calculus with acute cholecystitis Cholecystitis 34683.0 Diagnosis of Cholecystitis
J643000 Bile duct calculus + acute cholecystitis and no obstruction Cholecystitis 39025.0 Diagnosis of Cholecystitis
J643100 Bile duct calculus + acute cholecystitis and obstruction Cholecystitis 31650.0 Diagnosis of Cholecystitis
J643z00 Bile duct calculus + acute cholecystitis - obstruct NOS Cholecystitis 96679.0 Diagnosis of Cholecystitis
J644.00 Bile duct calculus with other cholecystitis Cholecystitis 26889.0 Diagnosis of Cholecystitis
J644000 Bile duct calculus + other cholecystitis and no obstruction Cholecystitis 107004.0 Diagnosis of Cholecystitis
J644100 Bile duct calculus + other cholecystitis and obstruction Cholecystitis 44649.0 Diagnosis of Cholecystitis
J644z00 Bile duct calculus + other cholecystitis - obstruction NOS Cholecystitis 61298.0 Diagnosis of Cholecystitis
J650.00 Acute cholecystitis Cholecystitis 505.0 Diagnosis of Cholecystitis
J650.11 Abscess of gallbladder Cholecystitis 44922.0 Diagnosis of Cholecystitis
J650.12 Empyema of gallbladder Cholecystitis 932.0 Diagnosis of Cholecystitis
J650000 Acute cholecystitis unspecified Cholecystitis 44605.0 Diagnosis of Cholecystitis
J650100 Acute angiocholecystitis Cholecystitis 72904.0 Diagnosis of Cholecystitis
J650200 Acute emphysematous cholecystitis Cholecystitis 46248.0 Diagnosis of Cholecystitis
J650300 Acute suppurative cholecystitis Cholecystitis 38289.0 Diagnosis of Cholecystitis
J650400 Acute gangrenous cholecystitis Cholecystitis 41018.0 Diagnosis of Cholecystitis
J650z00 Acute cholecystitis NOS Cholecystitis 15735.0 Diagnosis of Cholecystitis
J651.00 Other cholecystitis Cholecystitis 45172.0 Diagnosis of Cholecystitis
J651000 Chronic cholecystitis Cholecystitis 7459.0 Diagnosis of Cholecystitis
J651y00 Other cholecystitis OS Cholecystitis 63258.0 Diagnosis of Cholecystitis
J651z00 Cholecystitis NOS Cholecystitis 1924.0 Diagnosis of Cholecystitis
Jyu8100 [X]Other cholecystitis Cholecystitis 101538.0 Diagnosis of Cholecystitis
Rows: 22
Code Description Disease ReadcodeDescr Readcode
101538.0 Diagnosis of Cholecystitis Cholecystitis [X]Other cholecystitis Jyu8100
107004.0 Diagnosis of Cholecystitis Cholecystitis Bile duct calculus + other cholecystitis and no obstruction J644000
15735.0 Diagnosis of Cholecystitis Cholecystitis Acute cholecystitis NOS J650z00
1924.0 Diagnosis of Cholecystitis Cholecystitis Cholecystitis NOS J651z00
26889.0 Diagnosis of Cholecystitis Cholecystitis Bile duct calculus with other cholecystitis J644.00
31650.0 Diagnosis of Cholecystitis Cholecystitis Bile duct calculus + acute cholecystitis and obstruction J643100
34683.0 Diagnosis of Cholecystitis Cholecystitis Bile duct calculus with acute cholecystitis J643.00
38289.0 Diagnosis of Cholecystitis Cholecystitis Acute suppurative cholecystitis J650300
39025.0 Diagnosis of Cholecystitis Cholecystitis Bile duct calculus + acute cholecystitis and no obstruction J643000
41018.0 Diagnosis of Cholecystitis Cholecystitis Acute gangrenous cholecystitis J650400
44605.0 Diagnosis of Cholecystitis Cholecystitis Acute cholecystitis unspecified J650000
44649.0 Diagnosis of Cholecystitis Cholecystitis Bile duct calculus + other cholecystitis and obstruction J644100
44922.0 Diagnosis of Cholecystitis Cholecystitis Abscess of gallbladder J650.11
45172.0 Diagnosis of Cholecystitis Cholecystitis Other cholecystitis J651.00
46248.0 Diagnosis of Cholecystitis Cholecystitis Acute emphysematous cholecystitis J650200
505.0 Diagnosis of Cholecystitis Cholecystitis Acute cholecystitis J650.00
61298.0 Diagnosis of Cholecystitis Cholecystitis Bile duct calculus + other cholecystitis - obstruction NOS J644z00
63258.0 Diagnosis of Cholecystitis Cholecystitis Other cholecystitis OS J651y00
72904.0 Diagnosis of Cholecystitis Cholecystitis Acute angiocholecystitis J650100
7459.0 Diagnosis of Cholecystitis Cholecystitis Chronic cholecystitis J651000
932.0 Diagnosis of Cholecystitis Cholecystitis Empyema of gallbladder J650.12
96679.0 Diagnosis of Cholecystitis Cholecystitis Bile duct calculus + acute cholecystitis - obstruct NOS J643z00
Rows: 4
Code Description Disease Category
K80.0 Calculus of gallbladder with acute cholecystitis Cholecystitis Diagnosis of Cholecystitis
K80.1 Calculus of gallbladder with other cholecystitis Cholecystitis Diagnosis of Cholecystitis
K80.4 Calculus of bile duct with cholecystitis Cholecystitis Diagnosis of Cholecystitis
K81 Cholecystitis Cholecystitis Diagnosis of Cholecystitis

API

To Export Phenotype Details:

Format API
XML site_root/api/v1/public/phenotypes/PH134/version/268/detail/?format=xml
JSON site_root/api/v1/public/phenotypes/PH134/version/268/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of phenotype

details = get_phenotype_detail_by_version('PH134', '268', api_client=client)

To Export Phenotype Code List:

Format API
XML site_root/api/v1/public/phenotypes/PH134/version/268/export/codes/?format=xml
JSON site_root/api/v1/public/phenotypes/PH134/version/268/export/codes/?format=json
CSV site_root/phenotypes/PH134/version/268/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelists of phenotype

codelists = get_phenotype_code_list('PH134', '268', api_client=client)

Version History

Version
ID
Name Owner Publish date
268 Cholecystitis ieuan.scanlon 2021-10-06 currently shown

Export - export all codes into a csv file/JSON/XML for the current phenotype version.

Print - Print page.