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Non-acute cystitis

Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A

Type
Disease or Syndrome
ID
PH136
Version ID
272
Valid event data range
01/01/1999 - 01/07/2016
Sex
Female, Male
Agreement Date
2019-05-20
Coding system
Read codes v2 ICD10 codes Med codes
Tags /Collections
CALIBER Phenotype Library

Definition

At the specified date, a patient is defined as having had Non-acute cystitis IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:

Primary care

  1. Non-acute cystitis diagnosis or history of diagnosis during a consultation

OR Secondary care

  1. ALL diagnoses of Non-acute cystitis or history of diagnosis during a hospitalization

Implementation


Publications

  • Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3

Clinical Code List

Rows: 11
Code Description Disease Medcode Category
K151.00 Chronic interstitial cystitis Non-acute cystitis 11585.0 Diagnosis of Non-acute cystitis
K151000 Hunner's ulcer Non-acute cystitis 4897.0 Diagnosis of Non-acute cystitis
K151200 Submucous cystitis Non-acute cystitis 23776.0 Diagnosis of Non-acute cystitis
K151z00 Chronic interstitial cystitis NOS Non-acute cystitis 29460.0 Diagnosis of Non-acute cystitis
K152.00 Other chronic cystitis Non-acute cystitis 32787.0 Diagnosis of Non-acute cystitis
K152000 Subacute cystitis Non-acute cystitis 30068.0 Diagnosis of Non-acute cystitis
K152y00 Chronic cystitis unspecified Non-acute cystitis 3469.0 Diagnosis of Non-acute cystitis
K152z00 Other chronic cystitis NOS Non-acute cystitis 11315.0 Diagnosis of Non-acute cystitis
K153.11 Follicular cystitis Non-acute cystitis 11447.0 Diagnosis of Non-acute cystitis
K15y000 Cystitis cystica Non-acute cystitis 22682.0 Diagnosis of Non-acute cystitis
Kyu5000 [X]Other chronic cystitis Non-acute cystitis 72686.0 Diagnosis of Non-acute cystitis
Rows: 11
Code Description Disease ReadcodeDescr Readcode
11315.0 Diagnosis of Non-acute cystitis Non-acute cystitis Other chronic cystitis NOS K152z00
11447.0 Diagnosis of Non-acute cystitis Non-acute cystitis Follicular cystitis K153.11
11585.0 Diagnosis of Non-acute cystitis Non-acute cystitis Chronic interstitial cystitis K151.00
22682.0 Diagnosis of Non-acute cystitis Non-acute cystitis Cystitis cystica K15y000
23776.0 Diagnosis of Non-acute cystitis Non-acute cystitis Submucous cystitis K151200
29460.0 Diagnosis of Non-acute cystitis Non-acute cystitis Chronic interstitial cystitis NOS K151z00
30068.0 Diagnosis of Non-acute cystitis Non-acute cystitis Subacute cystitis K152000
32787.0 Diagnosis of Non-acute cystitis Non-acute cystitis Other chronic cystitis K152.00
3469.0 Diagnosis of Non-acute cystitis Non-acute cystitis Chronic cystitis unspecified K152y00
4897.0 Diagnosis of Non-acute cystitis Non-acute cystitis Hunner's ulcer K151000
72686.0 Diagnosis of Non-acute cystitis Non-acute cystitis [X]Other chronic cystitis Kyu5000
Rows: 2
Code Description Disease Category
N30.1 Interstitial cystitis (chronic) Non-acute cystitis Diagnosis of Non-acute cystitis
N30.2 Other chronic cystitis Non-acute cystitis Diagnosis of Non-acute cystitis

API

To Export Phenotype Details:

Format API
XML site_root/api/v1/public/phenotypes/PH136/version/272/detail/?format=xml
JSON site_root/api/v1/public/phenotypes/PH136/version/272/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of phenotype

details = get_phenotype_detail_by_version('PH136', '272', api_client=client)

To Export Phenotype Code List:

Format API
XML site_root/api/v1/public/phenotypes/PH136/version/272/export/codes/?format=xml
JSON site_root/api/v1/public/phenotypes/PH136/version/272/export/codes/?format=json
CSV site_root/phenotypes/PH136/version/272/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelists of phenotype

codelists = get_phenotype_code_list('PH136', '272', api_client=client)

Version History

Version
ID
Name Owner Publish date
272 Non-acute cystitis ieuan.scanlon 2021-10-06 currently shown

Export - export all codes into a csv file/JSON/XML for the current phenotype version.

Print - Print page.