Phenotypes > Liver fibrosis, sclerosis and cirrhosis

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Liver fibrosis, sclerosis and cirrhosis

Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A

ID
PH140
Version ID
280
Type
Disease or Syndrome
Data Sources
CPRD GOLD , HES Admitted Patient Care data for CPRD GOLD
Valid event data range
01/01/1999 - 01/07/2016
Sex
♀  Female ♂  Male
Agreement Date
2019-05-20
Coding system
Read codes v2 ICD10 codes Med codes
Collections
CALIBER Phenotype Library
Tags
No tags

Definition

At the specified date, a patient is defined as having had Liver fibrosis, sclerosis and 'Liver fibrosis, sclerosis and cirrhosis' IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:

Primary care

  1. Liver fibrosis, sclerosis and 'Liver fibrosis, sclerosis and cirrhosis' diagnosis or history of diagnosis or procedure during a consultation

OR Secondary care

  1. ALL diagnoses of Liver fibrosis, sclerosis and 'Liver fibrosis, sclerosis and cirrhosis' or history of diagnosis during a hospitalization

Publications

  • Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3

Clinical Code List

Expand All  /  Collapse All
Rows: 45
Code Description Disease Medcode Category
C310400 Glycogenosis with hepatic cirrhosis Liver fibrosis, sclerosis and cirrhosis 19512.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
C350012 Pigmentary cirrhosis of liver Liver fibrosis, sclerosis and cirrhosis 8206.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
C370800 Cystic fibrosis related cirrhosis Liver fibrosis, sclerosis and cirrhosis 102922.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
G852200 Oesophageal varices in cirrhosis of the liver Liver fibrosis, sclerosis and cirrhosis 26319.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
G852300 Oesophageal varices in alcoholic cirrhosis of the liver Liver fibrosis, sclerosis and cirrhosis 8363.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
J61..00 Cirrhosis and chronic liver disease Liver fibrosis, sclerosis and cirrhosis 6863.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
J612.00 Alcoholic cirrhosis of liver Liver fibrosis, sclerosis and cirrhosis 4743.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
J612.11 Florid cirrhosis Liver fibrosis, sclerosis and cirrhosis 68376.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
J612.12 Laennec's cirrhosis Liver fibrosis, sclerosis and cirrhosis 100474.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
J612000 Alcoholic fibrosis and sclerosis of liver Liver fibrosis, sclerosis and cirrhosis 21713.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
J613.00 Alcoholic liver damage unspecified Liver fibrosis, sclerosis and cirrhosis 7885.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
J613000 Alcoholic hepatic failure Liver fibrosis, sclerosis and cirrhosis 17330.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
J615.00 Cirrhosis - non alcoholic Liver fibrosis, sclerosis and cirrhosis 16725.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
J615.11 Portal cirrhosis Liver fibrosis, sclerosis and cirrhosis 47257.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
J615100 Multilobular portal cirrhosis Liver fibrosis, sclerosis and cirrhosis 69204.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
J615300 Diffuse nodular cirrhosis Liver fibrosis, sclerosis and cirrhosis 3450.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
J615400 Fatty portal cirrhosis Liver fibrosis, sclerosis and cirrhosis 44676.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
J615500 Hypertrophic portal cirrhosis Liver fibrosis, sclerosis and cirrhosis 92909.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
J615600 Capsular portal cirrhosis Liver fibrosis, sclerosis and cirrhosis 40567.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
J615700 Cardiac portal cirrhosis Liver fibrosis, sclerosis and cirrhosis 27438.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
J615711 Congestive cirrhosis Liver fibrosis, sclerosis and cirrhosis 108819.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
J615800 Juvenile portal cirrhosis Liver fibrosis, sclerosis and cirrhosis 96664.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
J615812 Indian childhood cirrhosis Liver fibrosis, sclerosis and cirrhosis 58184.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
J615C00 Xanthomatous portal cirrhosis Liver fibrosis, sclerosis and cirrhosis 100253.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
J615D00 Bacterial portal cirrhosis Liver fibrosis, sclerosis and cirrhosis 73482.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
J615G00 Zooparasitic portal cirrhosis Liver fibrosis, sclerosis and cirrhosis 109540.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
J615H00 Infectious cirrhosis NOS Liver fibrosis, sclerosis and cirrhosis 48928.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
J615y00 Portal cirrhosis unspecified Liver fibrosis, sclerosis and cirrhosis 55454.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
J615z00 Non-alcoholic cirrhosis NOS Liver fibrosis, sclerosis and cirrhosis 16455.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
J615z11 Macronodular cirrhosis of liver Liver fibrosis, sclerosis and cirrhosis 22841.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
J615z12 Cryptogenic cirrhosis of liver Liver fibrosis, sclerosis and cirrhosis 18739.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
J615z13 Cirrhosis of liver NOS Liver fibrosis, sclerosis and cirrhosis 1638.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
J615z15 Hepatic fibrosis Liver fibrosis, sclerosis and cirrhosis 71453.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
J616.00 Biliary cirrhosis Liver fibrosis, sclerosis and cirrhosis 9494.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
J616100 Secondary biliary cirrhosis Liver fibrosis, sclerosis and cirrhosis 15424.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
J616200 Biliary cirrhosis of children Liver fibrosis, sclerosis and cirrhosis 91591.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
J616z00 Biliary cirrhosis NOS Liver fibrosis, sclerosis and cirrhosis 58630.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
J617.00 Alcoholic hepatitis Liver fibrosis, sclerosis and cirrhosis 7943.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
J617000 Chronic alcoholic hepatitis Liver fibrosis, sclerosis and cirrhosis 7602.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
J61y300 Portal fibrosis without cirrhosis Liver fibrosis, sclerosis and cirrhosis 40963.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
J61y400 Hepatic fibrosis Liver fibrosis, sclerosis and cirrhosis 25383.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
J61y500 Hepatic sclerosis Liver fibrosis, sclerosis and cirrhosis 60104.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
J61y600 Hepatic fibrosis with hepatic sclerosis Liver fibrosis, sclerosis and cirrhosis 100592.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
J635600 Toxic liver disease with fibrosis and cirrhosis of liver Liver fibrosis, sclerosis and cirrhosis 44120.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
Jyu7100 [X]Other and unspecified cirrhosis of liver Liver fibrosis, sclerosis and cirrhosis 6015.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis
Rows: 45
Code Description Disease ReadcodeDescr Readcode
100253.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Xanthomatous portal cirrhosis J615C00
100474.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Laennec's cirrhosis J612.12
100592.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Hepatic fibrosis with hepatic sclerosis J61y600
102922.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Cystic fibrosis related cirrhosis C370800
108819.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Congestive cirrhosis J615711
109540.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Zooparasitic portal cirrhosis J615G00
15424.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Secondary biliary cirrhosis J616100
1638.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Cirrhosis of liver NOS J615z13
16455.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Non-alcoholic cirrhosis NOS J615z00
16725.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Cirrhosis - non alcoholic J615.00
17330.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Alcoholic hepatic failure J613000
18739.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Cryptogenic cirrhosis of liver J615z12
19512.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Glycogenosis with hepatic cirrhosis C310400
21713.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Alcoholic fibrosis and sclerosis of liver J612000
22841.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Macronodular cirrhosis of liver J615z11
25383.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Hepatic fibrosis J61y400
26319.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Oesophageal varices in cirrhosis of the liver G852200
27438.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Cardiac portal cirrhosis J615700
3450.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Diffuse nodular cirrhosis J615300
40567.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Capsular portal cirrhosis J615600
40963.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Portal fibrosis without cirrhosis J61y300
44120.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Toxic liver disease with fibrosis and cirrhosis of liver J635600
44676.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Fatty portal cirrhosis J615400
47257.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Portal cirrhosis J615.11
4743.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Alcoholic cirrhosis of liver J612.00
48928.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Infectious cirrhosis NOS J615H00
55454.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Portal cirrhosis unspecified J615y00
58184.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Indian childhood cirrhosis J615812
58630.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Biliary cirrhosis NOS J616z00
60104.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Hepatic sclerosis J61y500
6015.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis [X]Other and unspecified cirrhosis of liver Jyu7100
68376.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Florid cirrhosis J612.11
6863.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Cirrhosis and chronic liver disease J61..00
69204.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Multilobular portal cirrhosis J615100
71453.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Hepatic fibrosis J615z15
73482.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Bacterial portal cirrhosis J615D00
7602.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Chronic alcoholic hepatitis J617000
7885.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Alcoholic liver damage unspecified J613.00
7943.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Alcoholic hepatitis J617.00
8206.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Pigmentary cirrhosis of liver C350012
8363.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Oesophageal varices in alcoholic cirrhosis of the liver G852300
91591.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Biliary cirrhosis of children J616200
92909.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Hypertrophic portal cirrhosis J615500
9494.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Biliary cirrhosis J616.00
96664.0 Diagnosis of Liver fibrosis, sclerosis and cirrhosis Liver fibrosis, sclerosis and cirrhosis Juvenile portal cirrhosis J615800
Rows: 10
Code Description Disease Category
K70.1 Alcoholic hepatitis Liver fibrosis, sclerosis and cirrhosis Diagnosis of Liver fibrosis, sclerosis and cirrhosis
K70.2 Alcoholic fibrosis and sclerosis of liver Liver fibrosis, sclerosis and cirrhosis Diagnosis of Liver fibrosis, sclerosis and cirrhosis
K70.3 Alcoholic cirrhosis of liver Liver fibrosis, sclerosis and cirrhosis Diagnosis of Liver fibrosis, sclerosis and cirrhosis
K71.7 Toxic liver disease with fibrosis and cirrhosis of liver Liver fibrosis, sclerosis and cirrhosis Diagnosis of Liver fibrosis, sclerosis and cirrhosis
K74.0 Hepatic fibrosis Liver fibrosis, sclerosis and cirrhosis Diagnosis of Liver fibrosis, sclerosis and cirrhosis
K74.1 Hepatic sclerosis Liver fibrosis, sclerosis and cirrhosis Diagnosis of Liver fibrosis, sclerosis and cirrhosis
K74.2 Hepatic fibrosis with hepatic sclerosis Liver fibrosis, sclerosis and cirrhosis Diagnosis of Liver fibrosis, sclerosis and cirrhosis
K74.4 Secondary biliary cirrhosis Liver fibrosis, sclerosis and cirrhosis Diagnosis of Liver fibrosis, sclerosis and cirrhosis
K74.5 Biliary cirrhosis, unspecified Liver fibrosis, sclerosis and cirrhosis Diagnosis of Liver fibrosis, sclerosis and cirrhosis
K74.6 Other and unspecified cirrhosis of liver Liver fibrosis, sclerosis and cirrhosis Diagnosis of Liver fibrosis, sclerosis and cirrhosis

API

To Export Phenotype Details:

Format API
XML site_root/api/v1/public/phenotypes/PH140/version/280/detail/?format=xml
JSON site_root/api/v1/public/phenotypes/PH140/version/280/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of phenotype

details = get_phenotype_detail_by_version('PH140', '280', api_client=client)

To Export Phenotype Code List:

Format API
XML site_root/api/v1/public/phenotypes/PH140/version/280/export/codes/?format=xml
JSON site_root/api/v1/public/phenotypes/PH140/version/280/export/codes/?format=json
CSV site_root/phenotypes/PH140/version/280/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelists of phenotype

codelists = get_phenotype_code_list('PH140', '280', api_client=client)

Version History

Version
ID		 Name Owner Publish date
280 Liver fibrosis, sclerosis and cirrhosis ieuan.scanlon 2021-10-06 currently shown

Export - export all codes into a csv file/JSON/XML for the current phenotype version.

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