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Eye infections

Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A

Type
Disease or Syndrome
ID
PH167
Version ID
334
Valid event data range
01/01/1999 - 01/07/2016
Sex
Female, Male
Agreement Date
2019-05-20
Coding system
ICD10 codes
Tags /Collections
CALIBER Phenotype Library

Definition

At the specified date, a patient is defined as having had Eye infections IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:

Secondary care

  1. ALL diagnoses of Eye infections or history of diagnosis during a hospitalization

Implementation


Publications

  • Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3

Clinical Code List

Rows: 18
Code Description Disease Category
A18.5 Tuberculosis of eye Eye infections Diagnosis of Eye infections
A21.1 Oculoglandular tularaemia Eye infections Diagnosis of Eye infections
A54.3 Gonococcal infection of eye Eye infections Diagnosis of Eye infections
A71 Trachoma Eye infections Diagnosis of Eye infections
A74.0 Chlamydial conjunctivitis Eye infections Diagnosis of Eye infections
B00.5 Herpesviral ocular disease Eye infections Diagnosis of Eye infections
B02.3 Zoster ocular disease Eye infections Diagnosis of Eye infections
B30 Viral conjunctivitis Eye infections Diagnosis of Eye infections
B58.0 Toxoplasma oculopathy Eye infections Diagnosis of Eye infections
B69.1 Cysticercosis of eye Eye infections Diagnosis of Eye infections
B87.2 Ocular myiasis Eye infections Diagnosis of Eye infections
B94.0 Sequelae of trachoma Eye infections Diagnosis of Eye infections
H00.0 Hordeolum and other deep inflammation of eyelid Eye infections Diagnosis of Eye infections
H10 Conjunctivitis Eye infections Diagnosis of Eye infections
H13.1 Conjunctivitis in infectious and parasitic diseases classified elsewhere Eye infections Diagnosis of Eye infections
H19.1 Herpesviral keratitis and keratoconjunctivitis Eye infections Diagnosis of Eye infections
H19.2 Keratitis and keratoconjunctivitis in other infectious and parasitic diseases classified elsewhere Eye infections Diagnosis of Eye infections
P39.1 Neonatal conjunctivitis and dacryocystitis Eye infections Diagnosis of Eye infections

API

To Export Phenotype Details:

Format API
XML site_root/api/v1/public/phenotypes/PH167/version/334/detail/?format=xml
JSON site_root/api/v1/public/phenotypes/PH167/version/334/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of phenotype

details = get_phenotype_detail_by_version('PH167', '334', api_client=client)

To Export Phenotype Code List:

Format API
XML site_root/api/v1/public/phenotypes/PH167/version/334/export/codes/?format=xml
JSON site_root/api/v1/public/phenotypes/PH167/version/334/export/codes/?format=json
CSV site_root/phenotypes/PH167/version/334/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelists of phenotype

codelists = get_phenotype_code_list('PH167', '334', api_client=client)

Version History

Version
ID
Name Owner Publish date
334 Eye infections ieuan.scanlon 2021-10-06 currently shown

Export - export all codes into a csv file/JSON/XML for the current phenotype version.

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