Alcohol screening

Launders N, Richards-Belle A, Hardoon S, Osborn DPJ, Hayes JF

PH1678 / 3543 Clinical-Coded Phenotype

  1. Overview

    Phenotype Type
    Lifestyle risk factor
    Sex
    Both
    Valid Event Date Range
    No data
    Coding System
    EMIS codesRead codes v2
    Data Sources
    CPRD GOLD
    CPRD Aurum
    Collections
    DATAMIND
    Tags
    No data
    Ontology
    No data

  2. Definition

    This phenotype denotes that a screening activity has occurred, through presence of a "screening" code.

  3. Implementation

    Implementation

    Note, code lists were generated using CPRD medical dictionaries. These contain codes that have been used by primary care physicians using Vision and EMIS at the time the data set was created (2000-2019). This is therefore not a complete set of all currently available codes and therefore new code lists should be generated for studies using different data sets.

  4. Clinical Code List

  5. Publication

    Related publications

    No known publications

    Citation Example

    Launders N, Richards-Belle A, Hardoon S, Osborn DPJ, Hayes JF. PH1678 / 3543 - Alcohol screening. Phenotype Library [Online]. 05 September 2024. Available from: http://phenotypes.healthdatagateway.org/phenotypes/PH1678/version/3543/detail/. [Accessed 07 May 2025]

  6. API

    To Export Phenotype Details:

    FormatAPI
    JSON site_root/api/v1/phenotypes/PH1678/version/3543/detail/?format=json
    R Package

    # Download here

    library(ConceptLibraryClient)


    # Connect to API

    client = ConceptLibraryClient::Connection$new(public=TRUE)


    # Get details of phenotype

    phenotype_details = client$phenotypes$get_detail(
     'PH1678',
     version_id=3543
    )

    Py Package

    # Download here

    from pyconceptlibraryclient import Client


    # Connect to API

    client = Client(public=True)


    # Get codelist of phenotype

    phenotype_codelist = client.phenotypes.get_detail(
     'PH1678',
     version_id=3543
    )

    To Export Phenotype Code List:

    FormatAPI
    JSON site_root/api/v1/phenotypes/PH1678/version/3543/export/codes/?format=json
    R Package

    # Download here

    library(ConceptLibraryClient)


    # Connect to API

    client = ConceptLibraryClient::Connection$new(public=TRUE)


    # Get codelist of phenotype

    phenotype_codelist = client$phenotypes$get_codelist(
     'PH1678',
     version_id=3543
    )

    Py Package

    # Download here

    from pyconceptlibraryclient import Client


    # Connect to API

    client = Client(public=True)


    # Get codelist of phenotype

    phenotype_codelist = client.phenotypes.get_codelist(
     'PH1678',
     version_id=3543
    )

  7. Version History

    Version IDNameOwnerPublish date
    Alcohol screening nlaunders2024-09-11 08:55