Chronic paediatric conditions: Cystic Fibrosis
Swann OV, Williams TC, Fraser LK, Farrell J, Parker M, Kennedy J, Seabourne M, Brophy S, Harrison EM, Docherty AB, Pollock L
PH1691 / 3622 Clinical-Coded Phenotype
Overview
Phenotype TypeDisease or syndromeSexBothValid Event Date Range2021/01/01 - 2021/01/01Coding SystemSNOMED CT codesICD10 codesRead codes v2Data SourcesCollectionsPhenotype LibraryTagsNo dataOntologyDefinition
Implementation
Implementation
Clinical Code List
PUBLISHED
PUBLISHED
PUBLISHED
Publication
Related publications
No known publicationsCitation Requirements
To our knowledge, these are the first set of harmonised code lists for chronic paediatric conditions that span commonly used primary and secondary care coding systems in the UK. We hope they will prove a valuable resource for the paediatric research community and welcome suggestions for further development (Olivia.Swann@ed.ac.uk).
API
To Export Phenotype Details:
Format API JSON site_root/api/v1/phenotypes/PH1691/version/3622/detail/?format=json R Package library(ConceptLibraryClient)
# Connect to API
client = ConceptLibraryClient::Connection$new(public=TRUE)
# Get details of phenotype
phenotype_details = client$phenotypes$get_detail(
'PH1691',
version_id=3622
)Py Package from pyconceptlibraryclient import Client
# Connect to API
client = Client(public=True)
# Get codelist of phenotype
phenotype_codelist = client.phenotypes.get_detail(
'PH1691',
version_id=3622
)To Export Phenotype Code List:
Format API JSON site_root/api/v1/phenotypes/PH1691/version/3622/export/codes/?format=json R Package library(ConceptLibraryClient)
# Connect to API
client = ConceptLibraryClient::Connection$new(public=TRUE)
# Get codelist of phenotype
phenotype_codelist = client$phenotypes$get_codelist(
'PH1691',
version_id=3622
)Py Package from pyconceptlibraryclient import Client
# Connect to API
client = Client(public=True)
# Get codelist of phenotype
phenotype_codelist = client.phenotypes.get_codelist(
'PH1691',
version_id=3622
)Version History