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Gastritis and duodenitis

Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A

Type
Disease or Syndrome
ID
PH175
Version ID
350
Valid event data range
01/01/1999 - 01/07/2016
Sex
Female, Male
Agreement Date
2019-05-20
Coding system
Read codes v2 ICD10 codes Med codes
Tags /Collections
CALIBER Phenotype Library

Definition

At the specified date, a patient is defined as having had 'Gastritis and duodenitis' and duodenitis IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:

Primary care

  1. 'Gastritis and duodenitis' and duodenitis diagnosis or history of diagnosis or procedure during a consultation

OR Secondary care

  1. ALL diagnoses of 'Gastritis and duodenitis' and duodenitis or history of diagnosis during a hospitalization

Implementation


Publications

  • Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3

Clinical Code List

Rows: 28
Code Description Disease Medcode Category
A074313 Helicobacter gastritis Gastritis and duodenitis 14928.0 Diagnosis of Gastritis and duodenitis
J11z.11 Gastric erosions Gastritis and duodenitis 2877.0 Diagnosis of Gastritis and duodenitis
J123.00 Duodenal erosion Gastritis and duodenitis 3462.0 Diagnosis of Gastritis and duodenitis
J15..00 Gastritis and duodenitis Gastritis and duodenitis 3341.0 Diagnosis of Gastritis and duodenitis
J150.00 Acute gastritis Gastritis and duodenitis 5635.0 Diagnosis of Gastritis and duodenitis
J150000 Acute haemorrhagic gastritis Gastritis and duodenitis 29492.0 Diagnosis of Gastritis and duodenitis
J151.00 Chronic gastritis Gastritis and duodenitis 2936.0 Diagnosis of Gastritis and duodenitis
J151000 Chronic atrophic gastritis Gastritis and duodenitis 15025.0 Diagnosis of Gastritis and duodenitis
J151100 Chronic inflammatory gastritis Gastritis and duodenitis 11497.0 Diagnosis of Gastritis and duodenitis
J151200 Chronic superficial gastritis Gastritis and duodenitis 38638.0 Diagnosis of Gastritis and duodenitis
J151z00 Chronic gastritis NOS Gastritis and duodenitis 19190.0 Diagnosis of Gastritis and duodenitis
J152.00 Gastric mucosal hypertrophy Gastritis and duodenitis 14787.0 Diagnosis of Gastritis and duodenitis
J153.00 Alcoholic gastritis Gastritis and duodenitis 4506.0 Diagnosis of Gastritis and duodenitis
J154.00 Other specified gastritis Gastritis and duodenitis 5858.0 Diagnosis of Gastritis and duodenitis
J154000 Allergic gastritis Gastritis and duodenitis 33820.0 Diagnosis of Gastritis and duodenitis
J154100 Bile induced gastritis Gastritis and duodenitis 15348.0 Diagnosis of Gastritis and duodenitis
J154200 Irritant gastritis Gastritis and duodenitis 11519.0 Diagnosis of Gastritis and duodenitis
J154300 Corrosive gastritis Gastritis and duodenitis 27763.0 Diagnosis of Gastritis and duodenitis
J154400 Helicobacter gastritis Gastritis and duodenitis 10906.0 Diagnosis of Gastritis and duodenitis
J154z00 Other specified gastritis NOS Gastritis and duodenitis 18260.0 Diagnosis of Gastritis and duodenitis
J155.00 Gastritis unspecified Gastritis and duodenitis 1138.0 Diagnosis of Gastritis and duodenitis
J156.00 Gastroduodenitis unspecified Gastritis and duodenitis 25544.0 Diagnosis of Gastritis and duodenitis
J157.00 Duodenitis Gastritis and duodenitis 376.0 Diagnosis of Gastritis and duodenitis
J15z.00 Gastritis and duodenitis NOS Gastritis and duodenitis 9731.0 Diagnosis of Gastritis and duodenitis
J4z0.00 Non-infective gastritis NOS Gastritis and duodenitis 6420.0 Diagnosis of Gastritis and duodenitis
Jyu1200 [X]Other acute gastritis Gastritis and duodenitis 73154.0 Diagnosis of Gastritis and duodenitis
Jyu1300 [X]Other gastritis Gastritis and duodenitis 45769.0 Diagnosis of Gastritis and duodenitis
ZV65316 [V]Dietary counselling in gastritis Gastritis and duodenitis 18596.0 Diagnosis of Gastritis and duodenitis
Rows: 28
Code Description Disease ReadcodeDescr Readcode
10906.0 Diagnosis of Gastritis and duodenitis Gastritis and duodenitis Helicobacter gastritis J154400
1138.0 Diagnosis of Gastritis and duodenitis Gastritis and duodenitis Gastritis unspecified J155.00
11497.0 Diagnosis of Gastritis and duodenitis Gastritis and duodenitis Chronic inflammatory gastritis J151100
11519.0 Diagnosis of Gastritis and duodenitis Gastritis and duodenitis Irritant gastritis J154200
14787.0 Diagnosis of Gastritis and duodenitis Gastritis and duodenitis Gastric mucosal hypertrophy J152.00
14928.0 Diagnosis of Gastritis and duodenitis Gastritis and duodenitis Helicobacter gastritis A074313
15025.0 Diagnosis of Gastritis and duodenitis Gastritis and duodenitis Chronic atrophic gastritis J151000
15348.0 Diagnosis of Gastritis and duodenitis Gastritis and duodenitis Bile induced gastritis J154100
18260.0 Diagnosis of Gastritis and duodenitis Gastritis and duodenitis Other specified gastritis NOS J154z00
18596.0 Diagnosis of Gastritis and duodenitis Gastritis and duodenitis [V]Dietary counselling in gastritis ZV65316
19190.0 Diagnosis of Gastritis and duodenitis Gastritis and duodenitis Chronic gastritis NOS J151z00
25544.0 Diagnosis of Gastritis and duodenitis Gastritis and duodenitis Gastroduodenitis unspecified J156.00
27763.0 Diagnosis of Gastritis and duodenitis Gastritis and duodenitis Corrosive gastritis J154300
2877.0 Diagnosis of Gastritis and duodenitis Gastritis and duodenitis Gastric erosions J11z.11
2936.0 Diagnosis of Gastritis and duodenitis Gastritis and duodenitis Chronic gastritis J151.00
29492.0 Diagnosis of Gastritis and duodenitis Gastritis and duodenitis Acute haemorrhagic gastritis J150000
3341.0 Diagnosis of Gastritis and duodenitis Gastritis and duodenitis Gastritis and duodenitis J15..00
33820.0 Diagnosis of Gastritis and duodenitis Gastritis and duodenitis Allergic gastritis J154000
3462.0 Diagnosis of Gastritis and duodenitis Gastritis and duodenitis Duodenal erosion J123.00
376.0 Diagnosis of Gastritis and duodenitis Gastritis and duodenitis Duodenitis J157.00
38638.0 Diagnosis of Gastritis and duodenitis Gastritis and duodenitis Chronic superficial gastritis J151200
4506.0 Diagnosis of Gastritis and duodenitis Gastritis and duodenitis Alcoholic gastritis J153.00
45769.0 Diagnosis of Gastritis and duodenitis Gastritis and duodenitis [X]Other gastritis Jyu1300
5635.0 Diagnosis of Gastritis and duodenitis Gastritis and duodenitis Acute gastritis J150.00
5858.0 Diagnosis of Gastritis and duodenitis Gastritis and duodenitis Other specified gastritis J154.00
6420.0 Diagnosis of Gastritis and duodenitis Gastritis and duodenitis Non-infective gastritis NOS J4z0.00
73154.0 Diagnosis of Gastritis and duodenitis Gastritis and duodenitis [X]Other acute gastritis Jyu1200
9731.0 Diagnosis of Gastritis and duodenitis Gastritis and duodenitis Gastritis and duodenitis NOS J15z.00
Rows: 1
Code Description Disease Category
K29 Gastritis and duodenitis Gastritis and duodenitis Diagnosis of Gastritis and duodenitis

API

To Export Phenotype Details:

Format API
XML site_root/api/v1/public/phenotypes/PH175/version/350/detail/?format=xml
JSON site_root/api/v1/public/phenotypes/PH175/version/350/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of phenotype

details = get_phenotype_detail_by_version('PH175', '350', api_client=client)

To Export Phenotype Code List:

Format API
XML site_root/api/v1/public/phenotypes/PH175/version/350/export/codes/?format=xml
JSON site_root/api/v1/public/phenotypes/PH175/version/350/export/codes/?format=json
CSV site_root/phenotypes/PH175/version/350/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelists of phenotype

codelists = get_phenotype_code_list('PH175', '350', api_client=client)

Version History

Version
ID
Name Owner Publish date
350 Gastritis and duodenitis ieuan.scanlon 2021-10-06 currently shown

Export - export all codes into a csv file/JSON/XML for the current phenotype version.

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