Phenotype Library | phenotype: Diaphragmatic hernia

Diaphragmatic hernia

Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A

PH181

Version ID

362

Type

Disease or Syndrome

Data Sources

CPRD GOLD , HES Admitted Patient Care data for CPRD GOLD

Valid event data range

01/01/1999 - 01/07/2016

Sex

♀ Female ♂ Male

Agreement Date

2019-05-20

Coding system

Read codes v2 ICD10 codes OPCS4 codes Med codes

Collections

CALIBER Phenotype Library

Definition

At the specified date, a patient is defined as having had 'Diaphragmatic hernia' IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:

Primary care

'Diaphragmatic hernia' diagnosis or history of diagnosis or procedure during a consultation

OR Secondary care

ALL diagnoses of 'Diaphragmatic hernia' or history of diagnosis during a hospitalization OR Secondary care (OPCS4)
ALL procedures for 'Diaphragmatic hernia' during a hospitalization

Implementation

PhenoFlow Implementation:

https://kclhi.org/phenoflow/phenotype/download/526

Publications

Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3

Clinical Code List

CSV

JSON

XML

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C1202/3543 Diaphragmatic hernia - Primary care - Read codes v2

Rows: 26

Code	Description	Disease	Medcode	Category
760K.00	Repair of diaphragmatic hernia	Diaphragmatic hernia	8270.0	Procedure for Diaphragmatic hernia
760K.11	Repair of oesophageal hiatus hernia	Diaphragmatic hernia	18664.0	Procedure for Diaphragmatic hernia
760K.12	Repair of hiatus hernia	Diaphragmatic hernia	1178.0	Procedure for Diaphragmatic hernia
760K011	Allison repair of oesophageal hiatus hernia	Diaphragmatic hernia	47416.0	Procedure for Diaphragmatic hernia
760K012	Mason repair of oesophageal hiatus hernia	Diaphragmatic hernia	94728.0	Procedure for Diaphragmatic hernia
760K100	Repair of diaphragmatic hernia using thoracic approach NEC	Diaphragmatic hernia	63539.0	Procedure for Diaphragmatic hernia
760K300	Repair of diaphragmatic hernia using abdominal approach NEC	Diaphragmatic hernia	30980.0	Procedure for Diaphragmatic hernia
760K400	Boerema repair of hiatus hernia	Diaphragmatic hernia	72571.0	Procedure for Diaphragmatic hernia
760K500	Laparoscopic repair of hiatus hernia	Diaphragmatic hernia	22845.0	Procedure for Diaphragmatic hernia
760Ky00	Other specified repair of diaphragmatic hernia	Diaphragmatic hernia	60094.0	Procedure for Diaphragmatic hernia
760Kz00	Repair of diaphragmatic hernia NOS	Diaphragmatic hernia	37471.0	Procedure for Diaphragmatic hernia
760L312	Hill repair of hiatus hernia and gastropexy	Diaphragmatic hernia	61616.0	Procedure for Diaphragmatic hernia
J34..00	Diaphragmatic hernia	Diaphragmatic hernia	4987.0	Diagnosis of Diaphragmatic hernia
J34..11	Hiatus hernia	Diaphragmatic hernia	256.0	Diagnosis of Diaphragmatic hernia
J34..12	Parasternal hernia	Diaphragmatic hernia	31732.0	Diagnosis of Diaphragmatic hernia
J34..13	Retrosternal hernia	Diaphragmatic hernia	110120.0	Diagnosis of Diaphragmatic hernia
J340.00	Diaphragmatic hernia with gangrene	Diaphragmatic hernia	24703.0	Diagnosis of Diaphragmatic hernia
J341.00	Diaphragmatic hernia with obstruction	Diaphragmatic hernia	44233.0	Diagnosis of Diaphragmatic hernia
J342.00	Diaphragmatic hernia - irreducible	Diaphragmatic hernia	60697.0	Diagnosis of Diaphragmatic hernia
J343.00	Simple diaphragmatic hernia	Diaphragmatic hernia	34691.0	Diagnosis of Diaphragmatic hernia
J344.00	Hiatus hernia with gangrene	Diaphragmatic hernia	68880.0	Diagnosis of Diaphragmatic hernia
J345.00	Hiatus hernia with obstruction	Diaphragmatic hernia	63180.0	Diagnosis of Diaphragmatic hernia
J346.00	Hiatus hernia - irreducible	Diaphragmatic hernia	48153.0	Diagnosis of Diaphragmatic hernia
J347.00	Simple hiatus hernia	Diaphragmatic hernia	33779.0	Diagnosis of Diaphragmatic hernia
J348.00	Sliding hiatus hernia	Diaphragmatic hernia	12086.0	Diagnosis of Diaphragmatic hernia
J34y.00	Unspecified diaphragmatic hernia	Diaphragmatic hernia	62920.0	Diagnosis of Diaphragmatic hernia

C1203/3545 Diaphragmatic hernia - Primary care - Med codes

Rows: 26

Code	Description	Disease	ReadcodeDescr	Readcode
110120.0	Diagnosis of Diaphragmatic hernia	Diaphragmatic hernia	Retrosternal hernia	J34..13
1178.0	Procedure for Diaphragmatic hernia	Diaphragmatic hernia	Repair of hiatus hernia	760K.12
12086.0	Diagnosis of Diaphragmatic hernia	Diaphragmatic hernia	Sliding hiatus hernia	J348.00
18664.0	Procedure for Diaphragmatic hernia	Diaphragmatic hernia	Repair of oesophageal hiatus hernia	760K.11
22845.0	Procedure for Diaphragmatic hernia	Diaphragmatic hernia	Laparoscopic repair of hiatus hernia	760K500
24703.0	Diagnosis of Diaphragmatic hernia	Diaphragmatic hernia	Diaphragmatic hernia with gangrene	J340.00
256.0	Diagnosis of Diaphragmatic hernia	Diaphragmatic hernia	Hiatus hernia	J34..11
30980.0	Procedure for Diaphragmatic hernia	Diaphragmatic hernia	Repair of diaphragmatic hernia using abdominal approach NEC	760K300
31732.0	Diagnosis of Diaphragmatic hernia	Diaphragmatic hernia	Parasternal hernia	J34..12
33779.0	Diagnosis of Diaphragmatic hernia	Diaphragmatic hernia	Simple hiatus hernia	J347.00
34691.0	Diagnosis of Diaphragmatic hernia	Diaphragmatic hernia	Simple diaphragmatic hernia	J343.00
37471.0	Procedure for Diaphragmatic hernia	Diaphragmatic hernia	Repair of diaphragmatic hernia NOS	760Kz00
44233.0	Diagnosis of Diaphragmatic hernia	Diaphragmatic hernia	Diaphragmatic hernia with obstruction	J341.00
47416.0	Procedure for Diaphragmatic hernia	Diaphragmatic hernia	Allison repair of oesophageal hiatus hernia	760K011
48153.0	Diagnosis of Diaphragmatic hernia	Diaphragmatic hernia	Hiatus hernia - irreducible	J346.00
4987.0	Diagnosis of Diaphragmatic hernia	Diaphragmatic hernia	Diaphragmatic hernia	J34..00
60094.0	Procedure for Diaphragmatic hernia	Diaphragmatic hernia	Other specified repair of diaphragmatic hernia	760Ky00
60697.0	Diagnosis of Diaphragmatic hernia	Diaphragmatic hernia	Diaphragmatic hernia - irreducible	J342.00
61616.0	Procedure for Diaphragmatic hernia	Diaphragmatic hernia	Hill repair of hiatus hernia and gastropexy	760L312
62920.0	Diagnosis of Diaphragmatic hernia	Diaphragmatic hernia	Unspecified diaphragmatic hernia	J34y.00
63180.0	Diagnosis of Diaphragmatic hernia	Diaphragmatic hernia	Hiatus hernia with obstruction	J345.00
63539.0	Procedure for Diaphragmatic hernia	Diaphragmatic hernia	Repair of diaphragmatic hernia using thoracic approach NEC	760K100
68880.0	Diagnosis of Diaphragmatic hernia	Diaphragmatic hernia	Hiatus hernia with gangrene	J344.00
72571.0	Procedure for Diaphragmatic hernia	Diaphragmatic hernia	Boerema repair of hiatus hernia	760K400
8270.0	Procedure for Diaphragmatic hernia	Diaphragmatic hernia	Repair of diaphragmatic hernia	760K.00
94728.0	Procedure for Diaphragmatic hernia	Diaphragmatic hernia	Mason repair of oesophageal hiatus hernia	760K012

C1204/3547 Diaphragmatic hernia - Secondary care - Diagnoses - ICD10 codes

Rows: 1

Code	Description	Disease	Category
K44	Diaphragmatic hernia	Diaphragmatic hernia	Diagnosis of Diaphragmatic hernia

C1205/3549 Diaphragmatic hernia - Secondary care - Procedures - OPCS4 codes

Rows: 7

Code	Description	Disease	Category
G23	Repair of diaphragmatic hernia	Diaphragmatic hernia	Procedure for Diaphragmatic hernia
G23.1	Repair of oesophageal hiatus using thoracic approach	Diaphragmatic hernia	Procedure for Diaphragmatic hernia
G23.2	Repair of diaphragmatic hernia using thoracic approach NEC	Diaphragmatic hernia	Procedure for Diaphragmatic hernia
G23.3	Repair of oesophageal hiatus using abdominal approach	Diaphragmatic hernia	Procedure for Diaphragmatic hernia
G23.4	Repair of diaphragmatic hernia using abdominal approach NEC	Diaphragmatic hernia	Procedure for Diaphragmatic hernia
G23.8	Other specified repair of diaphragmatic hernia	Diaphragmatic hernia	Procedure for Diaphragmatic hernia
G23.9	Unspecified repair of diaphragmatic hernia	Diaphragmatic hernia	Procedure for Diaphragmatic hernia

API

To Export Phenotype Details:

Format	API
XML	site_root/api/v1/public/phenotypes/PH181/version/362/detail/?format=xml
JSON	site_root/api/v1/public/phenotypes/PH181/version/362/detail/?format=json
R Package	`# Download here library(ConceptLibraryClient) # Connect to API client = connect_to_API(public=TRUE) # Get details of phenotype details = get_phenotype_detail_by_version('PH181', '362', api_client=client)`

To Export Phenotype Code List:

Format	API
XML	site_root/api/v1/public/phenotypes/PH181/version/362/export/codes/?format=xml
JSON	site_root/api/v1/public/phenotypes/PH181/version/362/export/codes/?format=json
CSV	site_root/phenotypes/PH181/version/362/export/codes/
R Package	`# Download here library(ConceptLibraryClient) # Connect to API client = connect_to_API(public=TRUE) # Get codelists of phenotype codelists = get_phenotype_code_list('PH181', '362', api_client=client)`

Version History

Version ID	Name	Owner	Publish date
362	Diaphragmatic hernia	ieuan.scanlon	2021-10-06	currently shown