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Hypertrophic Cardiomyopathy

Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A

Type
Disease or Syndrome
ID
PH185
Version ID
370
Valid event data range
01/01/1999 - 01/07/2016
Sex
Female, Male
Agreement Date
2019-05-20
Coding system
Read codes v2 ICD10 codes Med codes
Tags /Collections
CALIBER Phenotype Library

Definition

At the specified date, a patient is defined as having had 'Hypertrophic Cardiomyopathy' IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:

Primary care

  1. 'Hypertrophic Cardiomyopathy' diagnosis or history of diagnosis during a consultation

OR Secondary care (ICD10)

  1. ALL diagnoses of 'Hypertrophic Cardiomyopathy' or history of diagnosis during a hospitalization

Implementation


Publications

  • Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3

Clinical Code List

Rows: 3
Code Description Disease Medcode Category
G551.00 Hypertrophic obstructive cardiomyopathy Hypertrophic Cardiomyopathy 8010.0 Diagnosis of Hypertrophic Cardiomyopathy
G554300 Hypertrophic non-obstructive cardiomyopathy Hypertrophic Cardiomyopathy 3499.0 Diagnosis of Hypertrophic Cardiomyopathy
Gyu5M00 [X]Other hypertrophic cardiomyopathy Hypertrophic Cardiomyopathy 70648.0 Diagnosis of Hypertrophic Cardiomyopathy
Rows: 3
Code Description Disease ReadcodeDescr Readcode
3499.0 Diagnosis of Hypertrophic Cardiomyopathy Hypertrophic Cardiomyopathy Hypertrophic non-obstructive cardiomyopathy G554300
70648.0 Diagnosis of Hypertrophic Cardiomyopathy Hypertrophic Cardiomyopathy [X]Other hypertrophic cardiomyopathy Gyu5M00
8010.0 Diagnosis of Hypertrophic Cardiomyopathy Hypertrophic Cardiomyopathy Hypertrophic obstructive cardiomyopathy G551.00
Rows: 2
Code Description Disease Category
I42.1 Obstructive hypertrophic cardiomyopathy Hypertrophic Cardiomyopathy Diagnosis of Hypertrophic Cardiomyopathy
I42.2 Other hypertrophic cardiomyopathy Hypertrophic Cardiomyopathy Diagnosis of Hypertrophic Cardiomyopathy

API

To Export Phenotype Details:

Format API
XML site_root/api/v1/public/phenotypes/PH185/version/370/detail/?format=xml
JSON site_root/api/v1/public/phenotypes/PH185/version/370/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of phenotype

details = get_phenotype_detail_by_version('PH185', '370', api_client=client)

To Export Phenotype Code List:

Format API
XML site_root/api/v1/public/phenotypes/PH185/version/370/export/codes/?format=xml
JSON site_root/api/v1/public/phenotypes/PH185/version/370/export/codes/?format=json
CSV site_root/phenotypes/PH185/version/370/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelists of phenotype

codelists = get_phenotype_code_list('PH185', '370', api_client=client)

Version History

Version
ID
Name Owner Publish date
370 Hypertrophic Cardiomyopathy ieuan.scanlon 2021-10-06 currently shown

Export - export all codes into a csv file/JSON/XML for the current phenotype version.

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