Phenotype Library | phenotype: Pericardial effusion (noninflammatory)

Pericardial effusion (noninflammatory)

Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A

PH234

Version ID

468

Type

Disease or Syndrome

Data Sources

CPRD GOLD , HES Admitted Patient Care data for CPRD GOLD

Valid event data range

01/01/1999 - 01/07/2016

Sex

♀ Female ♂ Male

Agreement Date

2019-05-20

Coding system

Read codes v2 ICD10 codes Med codes

Collections

CALIBER Phenotype Library

Definition

At the specified date, a patient is defined as having had 'Pericardial effusion (noninflammatory)' IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:

Primary care

'Pericardial effusion (noninflammatory)' (noninflammatory) diagnosis or history of diagnosis during a consultation

OR Secondary care (ICD10)

ALL diagnoses of 'Pericardial effusion (noninflammatory)' (noninflammatory) or history of diagnosis during a hospitalization

Publications

Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3

Clinical Code List

CSV

JSON

XML

Expand All / Collapse All

C1343/3825 Pericardial effusion (noninflammatory) - Primary care - Read codes v2

Rows: 5

Code	Description	Disease	Medcode	Category
G50..11	Pericardial effusion - acute	Pericardial effusion (noninflammatory)	45311.0	Diagnosis of Pericardial effusion (noninflammatory)
G533.00	Pericardial effusion - noninflammatory	Pericardial effusion (noninflammatory)	18293.0	Diagnosis of Pericardial effusion (noninflammatory)
G534.00	Pericardial effusion - acute	Pericardial effusion (noninflammatory)	2520.0	Diagnosis of Pericardial effusion (noninflammatory)
G536.00	Pericardial effusion	Pericardial effusion (noninflammatory)	105192.0	Diagnosis of Pericardial effusion (noninflammatory)
G536000	Chronic pericardial effusion	Pericardial effusion (noninflammatory)	107662.0	Diagnosis of Pericardial effusion (noninflammatory)

C1344/3827 Pericardial effusion (noninflammatory) - Primary care - Med codes

Rows: 5

Code	Description	Disease	ReadcodeDescr	Readcode
105192.0	Diagnosis of Pericardial effusion (noninflammatory)	Pericardial effusion (noninflammatory)	Pericardial effusion	G536.00
107662.0	Diagnosis of Pericardial effusion (noninflammatory)	Pericardial effusion (noninflammatory)	Chronic pericardial effusion	G536000
18293.0	Diagnosis of Pericardial effusion (noninflammatory)	Pericardial effusion (noninflammatory)	Pericardial effusion - noninflammatory	G533.00
2520.0	Diagnosis of Pericardial effusion (noninflammatory)	Pericardial effusion (noninflammatory)	Pericardial effusion - acute	G534.00
45311.0	Diagnosis of Pericardial effusion (noninflammatory)	Pericardial effusion (noninflammatory)	Pericardial effusion - acute	G50..11

C1345/3829 Pericardial effusion (noninflammatory) - Secondary care - Diagnoses - ICD10 codes

Rows: 1

Code	Description	Disease	Category
I31.3	Pericardial effusion (noninflammatory)	Pericardial effusion (noninflammatory)	Diagnosis of Pericardial effusion (noninflammatory)

API

To Export Phenotype Details:

Format	API
XML	site_root/api/v1/public/phenotypes/PH234/version/468/detail/?format=xml
JSON	site_root/api/v1/public/phenotypes/PH234/version/468/detail/?format=json
R Package	`# Download here library(ConceptLibraryClient) # Connect to API client = connect_to_API(public=TRUE) # Get details of phenotype details = get_phenotype_detail_by_version('PH234', '468', api_client=client)`

To Export Phenotype Code List:

Format	API
XML	site_root/api/v1/public/phenotypes/PH234/version/468/export/codes/?format=xml
JSON	site_root/api/v1/public/phenotypes/PH234/version/468/export/codes/?format=json
CSV	site_root/phenotypes/PH234/version/468/export/codes/
R Package	`# Download here library(ConceptLibraryClient) # Connect to API client = connect_to_API(public=TRUE) # Get codelists of phenotype codelists = get_phenotype_code_list('PH234', '468', api_client=client)`

Version History

Version ID	Name	Owner	Publish date
468	Pericardial effusion (noninflammatory)	ieuan.scanlon	2021-10-06	currently shown