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Pleural plaque

Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A

Type
Disease or Syndrome
ID
PH241
Version ID
482
Valid event data range
01/01/1999 - 01/07/2016
Sex
Female, Male
Agreement Date
2019-05-20
Coding system
Read codes v2 ICD10 codes Med codes
Tags /Collections
CALIBER Phenotype Library

Definition

At the specified date, a patient is defined as having had 'Pleural plaque' IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:

Primary care

  1. Other 'Pleural plaque' diagnosis or history of diagnosis during a consultation

OR Secondary care (ICD10)

  1. ALL diagnoses of 'Pleural plaque' or history of diagnosis during a hospitalization

Implementation


Publications

  • Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3

Clinical Code List

Rows: 4
Code Description Disease Medcode Category
H410.00 Pleural plaque disease due to asbestosis Pleural plaque 5005.0 Diagnosis of Pleural plaque
H410.11 Asbestos-induced pleural plaque Pleural plaque 100994.0 Diagnosis of Pleural plaque
H510100 Thickening of pleura Pleural plaque 3409.0 Diagnosis of Pleural plaque
H510C00 Pleural plaque Pleural plaque 102492.0 Diagnosis of Pleural plaque
Rows: 4
Code Description Disease ReadcodeDescr Readcode
100994.0 Diagnosis of Pleural plaque Pleural plaque Asbestos-induced pleural plaque H410.11
102492.0 Diagnosis of Pleural plaque Pleural plaque Pleural plaque H510C00
3409.0 Diagnosis of Pleural plaque Pleural plaque Thickening of pleura H510100
5005.0 Diagnosis of Pleural plaque Pleural plaque Pleural plaque disease due to asbestosis H410.00
Rows: 2
Code Description Disease Category
J92.0 Pleural plaque with presence of asbestos Pleural plaque Diagnosis of Pleural plaque
J92.9 Pleural plaque without asbestos Pleural plaque Diagnosis of Pleural plaque

API

To Export Phenotype Details:

Format API
XML site_root/api/v1/public/phenotypes/PH241/version/482/detail/?format=xml
JSON site_root/api/v1/public/phenotypes/PH241/version/482/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of phenotype

details = get_phenotype_detail_by_version('PH241', '482', api_client=client)

To Export Phenotype Code List:

Format API
XML site_root/api/v1/public/phenotypes/PH241/version/482/export/codes/?format=xml
JSON site_root/api/v1/public/phenotypes/PH241/version/482/export/codes/?format=json
CSV site_root/phenotypes/PH241/version/482/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelists of phenotype

codelists = get_phenotype_code_list('PH241', '482', api_client=client)

Version History

Version
ID
Name Owner Publish date
482 Pleural plaque ieuan.scanlon 2021-10-06 currently shown

Export - export all codes into a csv file/JSON/XML for the current phenotype version.

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