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Prematurity

Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A

Type
Disease or Syndrome
ID
PH246
Version ID
492
Valid event data range
01/01/1999 - 01/07/2016
Sex
Female, Male
Agreement Date
2019-05-20
Coding system
Read codes v2 ICD10 codes Med codes
Tags /Collections
CALIBER Phenotype Library

Definition

At the specified date, a patient is defined as having had Prematurity IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:

Primary care

  1. Prematurity diagnosis or history of diagnosis during a consultation AND IF the patient is aged < 1y at the first event date OR Secondary care

  2. ALL diagnoses of Prematurity or history of diagnosis during a hospitalization AND IF the patient is aged < 1y at the first event date

Implementation


Publications

  • Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3

Clinical Code List

Rows: 23
Code Description Disease Medcode Category
1546.00 H/O: premature delivery Prematurity 11829.0 History of Prematurity
635..13 Premature baby Prematurity 164.0 Diagnosis of Prematurity
6351.00 Baby premature 36-38 weeks Prematurity 29074.0 Diagnosis of Prematurity
6352.00 Baby v. premature 32-36 weeks Prematurity 27662.0 Diagnosis of Prematurity
6353.00 Baby extremely prem.28-32 week Prematurity 17915.0 Diagnosis of Prematurity
6356.00 Baby premature 26-28 weeks Prematurity 29996.0 Diagnosis of Prematurity
6357.00 Baby premature 24-26 weeks Prematurity 45702.0 Diagnosis of Prematurity
635A.00 Baby premature 37 weeks Prematurity 19598.0 Diagnosis of Prematurity
635B.00 Baby premature 36 weeks Prematurity 17968.0 Diagnosis of Prematurity
635C.00 Preterm infant status Prematurity 106617.0 Diagnosis of Prematurity
635C.11 Preterm Prematurity 107078.0 Diagnosis of Prematurity
Q11..11 Baby born premature Prematurity 20429.0 Diagnosis of Prematurity
Q110.00 Very premature - less than 1000g or less than 28 weeks Prematurity 26683.0 Diagnosis of Prematurity
Q110.11 Immature baby Prematurity 23926.0 Diagnosis of Prematurity
Q111.00 Premature - weight 1000g-2499g or gestation of 28-37weeks Prematurity 23670.0 Diagnosis of Prematurity
Q112.00 Extreme immaturity Prematurity 48011.0 Diagnosis of Prematurity
Q112.11 Extreme prematurity - less than 28 weeks Prematurity 32439.0 Diagnosis of Prematurity
Q116.00 Premature infant 28-37 weeks Prematurity 35209.0 Diagnosis of Prematurity
Q11z.00 Born premature NOS Prematurity 1211.0 Diagnosis of Prematurity
Q317100 Prematurity with interstitial pulmonary fibrosis Prematurity 46795.0 Diagnosis of Prematurity
Q432.00 Preterm delivery associated jaundice Prematurity 7828.0 Diagnosis of Prematurity
Q456.00 Anaemia of prematurity Prematurity 19574.0 Diagnosis of Prematurity
Qyu1100 [X]Other preterm infants Prematurity 47154.0 Diagnosis of Prematurity
Rows: 23
Code Description Disease ReadcodeDescr Readcode
106617.0 Diagnosis of Prematurity Prematurity Preterm infant status 635C.00
107078.0 Diagnosis of Prematurity Prematurity Preterm 635C.11
11829.0 History of Prematurity Prematurity H/O: premature delivery 1546.00
1211.0 Diagnosis of Prematurity Prematurity Born premature NOS Q11z.00
164.0 Diagnosis of Prematurity Prematurity Premature baby 635..13
17915.0 Diagnosis of Prematurity Prematurity Baby extremely prem.28-32 week 6353.00
17968.0 Diagnosis of Prematurity Prematurity Baby premature 36 weeks 635B.00
19574.0 Diagnosis of Prematurity Prematurity Anaemia of prematurity Q456.00
19598.0 Diagnosis of Prematurity Prematurity Baby premature 37 weeks 635A.00
20429.0 Diagnosis of Prematurity Prematurity Baby born premature Q11..11
23670.0 Diagnosis of Prematurity Prematurity Premature - weight 1000g-2499g or gestation of 28-37weeks Q111.00
23926.0 Diagnosis of Prematurity Prematurity Immature baby Q110.11
26683.0 Diagnosis of Prematurity Prematurity Very premature - less than 1000g or less than 28 weeks Q110.00
27662.0 Diagnosis of Prematurity Prematurity Baby v. premature 32-36 weeks 6352.00
29074.0 Diagnosis of Prematurity Prematurity Baby premature 36-38 weeks 6351.00
29996.0 Diagnosis of Prematurity Prematurity Baby premature 26-28 weeks 6356.00
32439.0 Diagnosis of Prematurity Prematurity Extreme prematurity - less than 28 weeks Q112.11
35209.0 Diagnosis of Prematurity Prematurity Premature infant 28-37 weeks Q116.00
45702.0 Diagnosis of Prematurity Prematurity Baby premature 24-26 weeks 6357.00
46795.0 Diagnosis of Prematurity Prematurity Prematurity with interstitial pulmonary fibrosis Q317100
47154.0 Diagnosis of Prematurity Prematurity [X]Other preterm infants Qyu1100
48011.0 Diagnosis of Prematurity Prematurity Extreme immaturity Q112.00
7828.0 Diagnosis of Prematurity Prematurity Preterm delivery associated jaundice Q432.00
Rows: 2
Code Description Disease Category
P07.2 Extreme immaturity Prematurity Diagnosis of Prematurity
P07.3 Other preterm infants Prematurity Diagnosis of Prematurity

API

To Export Phenotype Details:

Format API
XML site_root/api/v1/public/phenotypes/PH246/version/492/detail/?format=xml
JSON site_root/api/v1/public/phenotypes/PH246/version/492/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of phenotype

details = get_phenotype_detail_by_version('PH246', '492', api_client=client)

To Export Phenotype Code List:

Format API
XML site_root/api/v1/public/phenotypes/PH246/version/492/export/codes/?format=xml
JSON site_root/api/v1/public/phenotypes/PH246/version/492/export/codes/?format=json
CSV site_root/phenotypes/PH246/version/492/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelists of phenotype

codelists = get_phenotype_code_list('PH246', '492', api_client=client)

Version History

Version
ID
Name Owner Publish date
492 Prematurity ieuan.scanlon 2021-10-06 currently shown

Export - export all codes into a csv file/JSON/XML for the current phenotype version.

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