At the specified date, a patient is defined as having had 'Primary Malignancy_Prostate' IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:
Primary care
OR Secondary care
Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3
Code | Description | Disease | Medcode | Category |
---|---|---|---|---|
1427000.0 | H/O: prostate cancer | Primary Malignancy_Prostate | 102314.0 | History of Primary Malignancy_Prostate |
4M0..00 | Gleason grading of prostate cancer | Primary Malignancy_Prostate | 10178.0 | Diagnosis of Primary Malignancy_Prostate |
4M00.00 | Gleason prostate grade 2-4 (low) | Primary Malignancy_Prostate | 18503.0 | Diagnosis of Primary Malignancy_Prostate |
4M01.00 | Gleason prostate grade 5-7 (medium) | Primary Malignancy_Prostate | 18612.0 | Diagnosis of Primary Malignancy_Prostate |
4M02.00 | Gleason prostate grade 8-10 (high) | Primary Malignancy_Prostate | 26081.0 | Diagnosis of Primary Malignancy_Prostate |
7B20000 | Radical cystoprostatourethrectomy | Primary Malignancy_Prostate | 9541.0 | Procedure for Primary Malignancy_Prostate |
7B20200 | Radical cystoprostatectomy | Primary Malignancy_Prostate | 10633.0 | Procedure for Primary Malignancy_Prostate |
7B36000 | Radical prostatectomy - unspecified excision of pelvic nodes | Primary Malignancy_Prostate | 4997.0 | Procedure for Primary Malignancy_Prostate |
7B36500 | Radical prostatectomy without pelvic node excision | Primary Malignancy_Prostate | 12593.0 | Procedure for Primary Malignancy_Prostate |
7B36600 | Radical prostatectomy with pelvic node sampling | Primary Malignancy_Prostate | 11492.0 | Procedure for Primary Malignancy_Prostate |
7B36700 | Radical prostatectomy with pelvic lymphadenectomy | Primary Malignancy_Prostate | 9533.0 | Procedure for Primary Malignancy_Prostate |
B46..00 | Malignant neoplasm of prostate | Primary Malignancy_Prostate | 780.0 | Diagnosis of Primary Malignancy_Prostate |
ZV10415 | [V]Personal history of malignant neoplasm of prostate | Primary Malignancy_Prostate | 37306.0 | History of Primary Malignancy_Prostate |
Code | Description | Disease | ReadcodeDescr | Readcode |
---|---|---|---|---|
10178.0 | Diagnosis of Primary Malignancy_Prostate | Primary Malignancy_Prostate | Gleason grading of prostate cancer | 4M0..00 |
102314.0 | History of Primary Malignancy_Prostate | Primary Malignancy_Prostate | H/O: prostate cancer | 1427000.0 |
10633.0 | Procedure for Primary Malignancy_Prostate | Primary Malignancy_Prostate | Radical cystoprostatectomy | 7B20200 |
11492.0 | Procedure for Primary Malignancy_Prostate | Primary Malignancy_Prostate | Radical prostatectomy with pelvic node sampling | 7B36600 |
12593.0 | Procedure for Primary Malignancy_Prostate | Primary Malignancy_Prostate | Radical prostatectomy without pelvic node excision | 7B36500 |
18503.0 | Diagnosis of Primary Malignancy_Prostate | Primary Malignancy_Prostate | Gleason prostate grade 2-4 (low) | 4M00.00 |
18612.0 | Diagnosis of Primary Malignancy_Prostate | Primary Malignancy_Prostate | Gleason prostate grade 5-7 (medium) | 4M01.00 |
26081.0 | Diagnosis of Primary Malignancy_Prostate | Primary Malignancy_Prostate | Gleason prostate grade 8-10 (high) | 4M02.00 |
37306.0 | History of Primary Malignancy_Prostate | Primary Malignancy_Prostate | [V]Personal history of malignant neoplasm of prostate | ZV10415 |
4997.0 | Procedure for Primary Malignancy_Prostate | Primary Malignancy_Prostate | Radical prostatectomy - unspecified excision of pelvic nodes | 7B36000 |
780.0 | Diagnosis of Primary Malignancy_Prostate | Primary Malignancy_Prostate | Malignant neoplasm of prostate | B46..00 |
9533.0 | Procedure for Primary Malignancy_Prostate | Primary Malignancy_Prostate | Radical prostatectomy with pelvic lymphadenectomy | 7B36700 |
9541.0 | Procedure for Primary Malignancy_Prostate | Primary Malignancy_Prostate | Radical cystoprostatourethrectomy | 7B20000 |
Code | Description | Disease | Category |
---|---|---|---|
C61 | Malignant neoplasm of prostate | Primary Malignancy_Prostate | Diagnosis of Primary Malignancy_Prostate |
To Export Phenotype Details:
Format | API |
---|---|
XML | site_root/api/v1/public/phenotypes/PH265/version/530/detail/?format=xml |
JSON | site_root/api/v1/public/phenotypes/PH265/version/530/detail/?format=json |
R Package |
|
To Export Phenotype Code List:
Format | API |
---|---|
XML | site_root/api/v1/public/phenotypes/PH265/version/530/export/codes/?format=xml |
JSON | site_root/api/v1/public/phenotypes/PH265/version/530/export/codes/?format=json |
CSV | site_root/phenotypes/PH265/version/530/export/codes/ |
R Package |
|
Version ID |
Name | Owner | Publish date | |
---|---|---|---|---|
530 | Primary Malignancy_Prostate | ieuan.scanlon | 2021-10-06 | currently shown |
Export - export all codes into a csv file/JSON/XML for the current phenotype version.
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