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Other interstitial pulmonary diseases with fibrosis

Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A

Type
Disease or Syndrome
ID
PH276
Version ID
552
Valid event data range
01/01/1999 - 01/07/2016
Sex
Female, Male
Agreement Date
2019-05-20
Coding system
Read codes v2 ICD10 codes Med codes
Tags /Collections
CALIBER Phenotype Library

Definition

At the specified date, a patient is defined as having had Other interstitial pulmonary diseases with fibrosis IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:

Primary care

  1. Other interstitial pulmonary diseases with fibrosis diagnosis or history of diagnosis during a consultation

OR Secondary care (ICD10)

  1. ALL diagnoses of Other interstitial pulmonary diseases with fibrosis or history of diagnosis during a hospitalization

Implementation


Publications

  • Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3

Clinical Code List

Rows: 13
Code Description Disease Medcode Category
23E5.00 O/E - fibrosis of lung present Other interstitial pulmonary diseases with fibrosis 2680.0 Diagnosis of Other interstitial pulmonary diseases with fibrosis
23E5.11 O/E - fibrosis of lung Other interstitial pulmonary diseases with fibrosis 7994.0 Diagnosis of Other interstitial pulmonary diseases with fibrosis
H55..00 Postinflammatory pulmonary fibrosis Other interstitial pulmonary diseases with fibrosis 7791.0 Diagnosis of Other interstitial pulmonary diseases with fibrosis
H55..11 Cirrhosis of lung Other interstitial pulmonary diseases with fibrosis 40953.0 Diagnosis of Other interstitial pulmonary diseases with fibrosis
H563.00 Idiopathic fibrosing alveolitis Other interstitial pulmonary diseases with fibrosis 6837.0 Diagnosis of Other interstitial pulmonary diseases with fibrosis
H563.11 Hamman - Rich syndrome Other interstitial pulmonary diseases with fibrosis 63174.0 Diagnosis of Other interstitial pulmonary diseases with fibrosis
H563.12 Cryptogenic fibrosing alveolitis Other interstitial pulmonary diseases with fibrosis 5519.0 Diagnosis of Other interstitial pulmonary diseases with fibrosis
H563.13 Idiopathic pulmonary fibrosis Other interstitial pulmonary diseases with fibrosis 103753.0 Diagnosis of Other interstitial pulmonary diseases with fibrosis
H563100 Diffuse pulmonary fibrosis Other interstitial pulmonary diseases with fibrosis 6051.0 Diagnosis of Other interstitial pulmonary diseases with fibrosis
H563200 Pulmonary fibrosis Other interstitial pulmonary diseases with fibrosis 103472.0 Diagnosis of Other interstitial pulmonary diseases with fibrosis
H563300 Usual interstitial pneumonitis Other interstitial pulmonary diseases with fibrosis 103559.0 Diagnosis of Other interstitial pulmonary diseases with fibrosis
H563z00 Idiopathic fibrosing alveolitis NOS Other interstitial pulmonary diseases with fibrosis 28229.0 Diagnosis of Other interstitial pulmonary diseases with fibrosis
Hyu5000 [X]Other interstitial pulmonary diseases with fibrosis Other interstitial pulmonary diseases with fibrosis 65060.0 Diagnosis of Other interstitial pulmonary diseases with fibrosis
Rows: 13
Code Description Disease ReadcodeDescr Readcode
103472.0 Diagnosis of Other interstitial pulmonary diseases with fibrosis Other interstitial pulmonary diseases with fibrosis Pulmonary fibrosis H563200
103559.0 Diagnosis of Other interstitial pulmonary diseases with fibrosis Other interstitial pulmonary diseases with fibrosis Usual interstitial pneumonitis H563300
103753.0 Diagnosis of Other interstitial pulmonary diseases with fibrosis Other interstitial pulmonary diseases with fibrosis Idiopathic pulmonary fibrosis H563.13
2680.0 Diagnosis of Other interstitial pulmonary diseases with fibrosis Other interstitial pulmonary diseases with fibrosis O/E - fibrosis of lung present 23E5.00
28229.0 Diagnosis of Other interstitial pulmonary diseases with fibrosis Other interstitial pulmonary diseases with fibrosis Idiopathic fibrosing alveolitis NOS H563z00
40953.0 Diagnosis of Other interstitial pulmonary diseases with fibrosis Other interstitial pulmonary diseases with fibrosis Cirrhosis of lung H55..11
5519.0 Diagnosis of Other interstitial pulmonary diseases with fibrosis Other interstitial pulmonary diseases with fibrosis Cryptogenic fibrosing alveolitis H563.12
6051.0 Diagnosis of Other interstitial pulmonary diseases with fibrosis Other interstitial pulmonary diseases with fibrosis Diffuse pulmonary fibrosis H563100
63174.0 Diagnosis of Other interstitial pulmonary diseases with fibrosis Other interstitial pulmonary diseases with fibrosis Hamman - Rich syndrome H563.11
65060.0 Diagnosis of Other interstitial pulmonary diseases with fibrosis Other interstitial pulmonary diseases with fibrosis [X]Other interstitial pulmonary diseases with fibrosis Hyu5000
6837.0 Diagnosis of Other interstitial pulmonary diseases with fibrosis Other interstitial pulmonary diseases with fibrosis Idiopathic fibrosing alveolitis H563.00
7791.0 Diagnosis of Other interstitial pulmonary diseases with fibrosis Other interstitial pulmonary diseases with fibrosis Postinflammatory pulmonary fibrosis H55..00
7994.0 Diagnosis of Other interstitial pulmonary diseases with fibrosis Other interstitial pulmonary diseases with fibrosis O/E - fibrosis of lung 23E5.11
Rows: 1
Code Description Disease Category
J84.1 Other interstitial pulmonary diseases with fibrosis Other interstitial pulmonary diseases with fibrosis Diagnosis of Other interstitial pulmonary diseases with fibrosis

API

To Export Phenotype Details:

Format API
XML site_root/api/v1/public/phenotypes/PH276/version/552/detail/?format=xml
JSON site_root/api/v1/public/phenotypes/PH276/version/552/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of phenotype

details = get_phenotype_detail_by_version('PH276', '552', api_client=client)

To Export Phenotype Code List:

Format API
XML site_root/api/v1/public/phenotypes/PH276/version/552/export/codes/?format=xml
JSON site_root/api/v1/public/phenotypes/PH276/version/552/export/codes/?format=json
CSV site_root/phenotypes/PH276/version/552/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelists of phenotype

codelists = get_phenotype_code_list('PH276', '552', api_client=client)

Version History

Version
ID
Name Owner Publish date
552 Other interstitial pulmonary diseases with fibrosis ieuan.scanlon 2021-10-06 currently shown

Export - export all codes into a csv file/JSON/XML for the current phenotype version.

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