Phenotype Library | phenotype: Raynaud's syndrome

Raynaud's syndrome

Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A

PH277

Version ID

554

Type

Disease or Syndrome

Data Sources

CPRD GOLD , HES Admitted Patient Care data for CPRD GOLD

Valid event data range

01/01/1999 - 01/07/2016

Sex

♀ Female ♂ Male

Agreement Date

2019-05-20

Coding system

Read codes v2 ICD10 codes Med codes

Collections

CALIBER Phenotype Library

Definition

At the specified date, a patient is defined as having had Raynaud's syndrome IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:

Primary care

Raynaud's syndrome diagnosis or history of diagnosis during a consultation

OR Secondary care (ICD10)

ALL diagnoses of Raynaud's syndrome or history of diagnosis during a hospitalization

Implementation

PhenoFlow Implementation:

https://kclhi.org/phenoflow/phenotype/download/807

Publications

Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3

Clinical Code List

CSV

JSON

XML

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C1476/4091 Raynaud's syndrome - Primary care - Read codes v2

Rows: 5

Code	Description	Disease	Medcode	Category
G730.00	Raynaud's syndrome	Raynaud's syndrome	1231.0	Diagnosis of Raynaud's syndrome
G730000	Raynaud's disease	Raynaud's syndrome	1002.0	Diagnosis of Raynaud's syndrome
G730100	Raynaud's phenomenon	Raynaud's syndrome	5595.0	Diagnosis of Raynaud's syndrome
G730111	Vibratory white finger	Raynaud's syndrome	23880.0	Diagnosis of Raynaud's syndrome
G730z00	Raynaud's syndrome NOS	Raynaud's syndrome	39097.0	Diagnosis of Raynaud's syndrome

C1477/4093 Raynaud's syndrome - Primary care - Med codes

Rows: 5

Code	Description	Disease	ReadcodeDescr	Readcode
1002.0	Diagnosis of Raynaud's syndrome	Raynaud's syndrome	Raynaud's disease	G730000
1231.0	Diagnosis of Raynaud's syndrome	Raynaud's syndrome	Raynaud's syndrome	G730.00
23880.0	Diagnosis of Raynaud's syndrome	Raynaud's syndrome	Vibratory white finger	G730111
39097.0	Diagnosis of Raynaud's syndrome	Raynaud's syndrome	Raynaud's syndrome NOS	G730z00
5595.0	Diagnosis of Raynaud's syndrome	Raynaud's syndrome	Raynaud's phenomenon	G730100

C1478/4095 Raynaud's syndrome - Secondary care - Diagnoses - ICD10 codes

Rows: 1

Code	Description	Disease	Category
I73.0	Raynaud's syndrome	Raynaud's syndrome	Diagnosis of Raynaud's syndrome

API

To Export Phenotype Details:

Format	API
XML	site_root/api/v1/public/phenotypes/PH277/version/554/detail/?format=xml
JSON	site_root/api/v1/public/phenotypes/PH277/version/554/detail/?format=json
R Package	`# Download here library(ConceptLibraryClient) # Connect to API client = connect_to_API(public=TRUE) # Get details of phenotype details = get_phenotype_detail_by_version('PH277', '554', api_client=client)`

To Export Phenotype Code List:

Format	API
XML	site_root/api/v1/public/phenotypes/PH277/version/554/export/codes/?format=xml
JSON	site_root/api/v1/public/phenotypes/PH277/version/554/export/codes/?format=json
CSV	site_root/phenotypes/PH277/version/554/export/codes/
R Package	`# Download here library(ConceptLibraryClient) # Connect to API client = connect_to_API(public=TRUE) # Get codelists of phenotype codelists = get_phenotype_code_list('PH277', '554', api_client=client)`

Version History

Version ID	Name	Owner	Publish date
554	Raynaud's syndrome	ieuan.scanlon	2021-10-06	currently shown