Print

Sarcoidosis

Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A

Type
Disease or Syndrome
ID
PH284
Version ID
568
Valid event data range
01/01/1999 - 01/07/2016
Sex
Female, Male
Agreement Date
2019-05-20
Coding system
Read codes v2 ICD10 codes Med codes
Tags /Collections
CALIBER Phenotype Library

Definition

At the specified date, a patient is defined as having had 'Sarcoidosis' IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:

Primary care

  1. 'Sarcoidosis' diagnosis or history of diagnosis during a consultation

OR Secondary care (ICD10)

  1. ALL diagnoses of 'Sarcoidosis' or history of diagnosis during a hospitalization

Implementation


Publications

  • Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3

Clinical Code List

Rows: 18
Code Description Disease Medcode Category
AD5..00 Sarcoidosis Sarcoidosis 3865.0 Diagnosis of Sarcoidosis
AD50.00 Sarcoidosis of lung Sarcoidosis 33980.0 Diagnosis of Sarcoidosis
AD51.00 Sarcoidosis of lymph nodes Sarcoidosis 49075.0 Diagnosis of Sarcoidosis
AD52.00 Sarcoidosis of lung with sarcoidosis of lymph nodes Sarcoidosis 58841.0 Diagnosis of Sarcoidosis
AD53.00 Sarcoidosis of skin Sarcoidosis 27769.0 Diagnosis of Sarcoidosis
AD53000 Lupus pernio Sarcoidosis 28952.0 Diagnosis of Sarcoidosis
AD54.00 Sarcoidosis of inferior turbinates Sarcoidosis 72595.0 Diagnosis of Sarcoidosis
AD55.00 Sarcoid arthropathy Sarcoidosis 40613.0 Diagnosis of Sarcoidosis
Cyu0600 [X]Sarcoidosis of other and combined sites Sarcoidosis 73284.0 Diagnosis of Sarcoidosis
F013.00 Meningitis due to sarcoidosis Sarcoidosis 49454.0 Diagnosis of Sarcoidosis
F326300 Multiple cranial nerve palsies in sarcoidosis Sarcoidosis 55612.0 Diagnosis of Sarcoidosis
F374900 Polyneuropathy in sarcoidosis Sarcoidosis 40751.0 Diagnosis of Sarcoidosis
F396500 Myopathy due to sarcoidosis Sarcoidosis 52519.0 Diagnosis of Sarcoidosis
G558300 Sarcoid heart disease Sarcoidosis 47037.0 Diagnosis of Sarcoidosis
G5y7.00 Sarcoid myocarditis Sarcoidosis 34437.0 Diagnosis of Sarcoidosis
H57y200 Pulmonary sarcoidosis Sarcoidosis 3859.0 Diagnosis of Sarcoidosis
J63A.00 Hepatic granulomas in sarcoidosis Sarcoidosis 26405.0 Diagnosis of Sarcoidosis
N233200 Myositis in sarcoidosis Sarcoidosis 47718.0 Diagnosis of Sarcoidosis
Rows: 18
Code Description Disease ReadcodeDescr Readcode
26405.0 Diagnosis of Sarcoidosis Sarcoidosis Hepatic granulomas in sarcoidosis J63A.00
27769.0 Diagnosis of Sarcoidosis Sarcoidosis Sarcoidosis of skin AD53.00
28952.0 Diagnosis of Sarcoidosis Sarcoidosis Lupus pernio AD53000
33980.0 Diagnosis of Sarcoidosis Sarcoidosis Sarcoidosis of lung AD50.00
34437.0 Diagnosis of Sarcoidosis Sarcoidosis Sarcoid myocarditis G5y7.00
3859.0 Diagnosis of Sarcoidosis Sarcoidosis Pulmonary sarcoidosis H57y200
3865.0 Diagnosis of Sarcoidosis Sarcoidosis Sarcoidosis AD5..00
40613.0 Diagnosis of Sarcoidosis Sarcoidosis Sarcoid arthropathy AD55.00
40751.0 Diagnosis of Sarcoidosis Sarcoidosis Polyneuropathy in sarcoidosis F374900
47037.0 Diagnosis of Sarcoidosis Sarcoidosis Sarcoid heart disease G558300
47718.0 Diagnosis of Sarcoidosis Sarcoidosis Myositis in sarcoidosis N233200
49075.0 Diagnosis of Sarcoidosis Sarcoidosis Sarcoidosis of lymph nodes AD51.00
49454.0 Diagnosis of Sarcoidosis Sarcoidosis Meningitis due to sarcoidosis F013.00
52519.0 Diagnosis of Sarcoidosis Sarcoidosis Myopathy due to sarcoidosis F396500
55612.0 Diagnosis of Sarcoidosis Sarcoidosis Multiple cranial nerve palsies in sarcoidosis F326300
58841.0 Diagnosis of Sarcoidosis Sarcoidosis Sarcoidosis of lung with sarcoidosis of lymph nodes AD52.00
72595.0 Diagnosis of Sarcoidosis Sarcoidosis Sarcoidosis of inferior turbinates AD54.00
73284.0 Diagnosis of Sarcoidosis Sarcoidosis [X]Sarcoidosis of other and combined sites Cyu0600
Rows: 3
Code Description Disease Category
D86 Sarcoidosis Sarcoidosis Diagnosis of Sarcoidosis
G53.2 Multiple cranial nerve palsies in sarcoidosis Sarcoidosis Diagnosis of Sarcoidosis
M63.3 Myositis in sarcoidosis Sarcoidosis Diagnosis of Sarcoidosis

API

To Export Phenotype Details:

Format API
XML site_root/api/v1/public/phenotypes/PH284/version/568/detail/?format=xml
JSON site_root/api/v1/public/phenotypes/PH284/version/568/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of phenotype

details = get_phenotype_detail_by_version('PH284', '568', api_client=client)

To Export Phenotype Code List:

Format API
XML site_root/api/v1/public/phenotypes/PH284/version/568/export/codes/?format=xml
JSON site_root/api/v1/public/phenotypes/PH284/version/568/export/codes/?format=json
CSV site_root/phenotypes/PH284/version/568/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelists of phenotype

codelists = get_phenotype_code_list('PH284', '568', api_client=client)

Version History

Version
ID
Name Owner Publish date
568 Sarcoidosis ieuan.scanlon 2021-10-06 currently shown

Export - export all codes into a csv file/JSON/XML for the current phenotype version.

Print - Print page.