Phenotype Library | phenotype: Scleritis and episcleritis

Scleritis and episcleritis

Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A

PH286

Version ID

572

Type

Disease or Syndrome

Data Sources

CPRD GOLD , HES Admitted Patient Care data for CPRD GOLD

Valid event data range

01/01/1999 - 01/07/2016

Sex

♀ Female ♂ Male

Agreement Date

2019-05-20

Coding system

Read codes v2 ICD10 codes Med codes

Collections

CALIBER Phenotype Library

Definition

At the specified date, a patient is defined as having had 'Scleritis and episcleritis' and epi'Scleritis and episcleritis' IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:

Primary care

'Scleritis and episcleritis' and epi'Scleritis and episcleritis' diagnosis or history of diagnosis during a consultation

OR Secondary care

ALL diagnoses of 'Scleritis and episcleritis' and epi'Scleritis and episcleritis' or history of diagnosis during a hospitalization

Implementation

PhenoFlow Implementation:

https://kclhi.org/phenoflow/phenotype/download/834

Publications

Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3

Clinical Code List

CSV

JSON

XML

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C1504/4147 Scleritis and episcleritis - Primary care - Read codes v2

Rows: 14

Code	Description	Disease	Medcode	Category
F4K0.00	Scleritis and episcleritis	Scleritis and episcleritis	15996.0	Diagnosis of scleritis or episcleritis
F4K0.11	Episcleritis	Scleritis and episcleritis	136.0	Diagnosis of scleritis or episcleritis
F4K0.12	Scleritis	Scleritis and episcleritis	5318.0	Diagnosis of scleritis or episcleritis
F4K0000	Unspecified scleritis	Scleritis and episcleritis	35599.0	Diagnosis of scleritis or episcleritis
F4K0100	Episcleritis periodica fugax	Scleritis and episcleritis	47820.0	Diagnosis of scleritis or episcleritis
F4K0200	Nodular episcleritis	Scleritis and episcleritis	6783.0	Diagnosis of scleritis or episcleritis
F4K0300	Anterior scleritis	Scleritis and episcleritis	40365.0	Diagnosis of scleritis or episcleritis
F4K0400	Scleromalacia perforans	Scleritis and episcleritis	40647.0	Diagnosis of scleritis or episcleritis
F4K0500	Sclerokeratitis	Scleritis and episcleritis	37665.0	Diagnosis of scleritis or episcleritis
F4K0600	Brawny scleritis	Scleritis and episcleritis	51523.0	Diagnosis of scleritis or episcleritis
F4K0700	Posterior scleritis	Scleritis and episcleritis	28123.0	Diagnosis of scleritis or episcleritis
F4K0711	Sclerotenonitis	Scleritis and episcleritis	65835.0	Diagnosis of scleritis or episcleritis
F4K0z00	Scleritis or episcleritis NOS	Scleritis and episcleritis	44859.0	Diagnosis of scleritis or episcleritis
FyuD800	[X]Scleritis+episcleritis in diseases CE	Scleritis and episcleritis	101293.0	Diagnosis of scleritis or episcleritis

C1505/4149 Scleritis and episcleritis - Primary care - Med codes

Rows: 14

Code	Description	Disease	ReadcodeDescr	Readcode
101293.0	Diagnosis of scleritis or episcleritis	Scleritis and episcleritis	[X]Scleritis+episcleritis in diseases CE	FyuD800
136.0	Diagnosis of scleritis or episcleritis	Scleritis and episcleritis	Episcleritis	F4K0.11
15996.0	Diagnosis of scleritis or episcleritis	Scleritis and episcleritis	Scleritis and episcleritis	F4K0.00
28123.0	Diagnosis of scleritis or episcleritis	Scleritis and episcleritis	Posterior scleritis	F4K0700
35599.0	Diagnosis of scleritis or episcleritis	Scleritis and episcleritis	Unspecified scleritis	F4K0000
37665.0	Diagnosis of scleritis or episcleritis	Scleritis and episcleritis	Sclerokeratitis	F4K0500
40365.0	Diagnosis of scleritis or episcleritis	Scleritis and episcleritis	Anterior scleritis	F4K0300
40647.0	Diagnosis of scleritis or episcleritis	Scleritis and episcleritis	Scleromalacia perforans	F4K0400
44859.0	Diagnosis of scleritis or episcleritis	Scleritis and episcleritis	Scleritis or episcleritis NOS	F4K0z00
47820.0	Diagnosis of scleritis or episcleritis	Scleritis and episcleritis	Episcleritis periodica fugax	F4K0100
51523.0	Diagnosis of scleritis or episcleritis	Scleritis and episcleritis	Brawny scleritis	F4K0600
5318.0	Diagnosis of scleritis or episcleritis	Scleritis and episcleritis	Scleritis	F4K0.12
65835.0	Diagnosis of scleritis or episcleritis	Scleritis and episcleritis	Sclerotenonitis	F4K0711
6783.0	Diagnosis of scleritis or episcleritis	Scleritis and episcleritis	Nodular episcleritis	F4K0200

C1506/4151 Scleritis and episcleritis - Secondary care - Diagnoses - ICD10 codes

Rows: 3

Code	Description	Disease	Category
H15.0	Scleritis	Scleritis and episcleritis	Diagnosis of scleritis and episcleritis
H15.1	Episcleritis	Scleritis and episcleritis	Diagnosis of scleritis and episcleritis
H19.0	Scleritis and episcleritis in diseases classified elsewhere	Scleritis and episcleritis	Diagnosis of scleritis and episcleritis

API

To Export Phenotype Details:

Format	API
XML	site_root/api/v1/public/phenotypes/PH286/version/572/detail/?format=xml
JSON	site_root/api/v1/public/phenotypes/PH286/version/572/detail/?format=json
R Package	`# Download here library(ConceptLibraryClient) # Connect to API client = connect_to_API(public=TRUE) # Get details of phenotype details = get_phenotype_detail_by_version('PH286', '572', api_client=client)`

To Export Phenotype Code List:

Format	API
XML	site_root/api/v1/public/phenotypes/PH286/version/572/export/codes/?format=xml
JSON	site_root/api/v1/public/phenotypes/PH286/version/572/export/codes/?format=json
CSV	site_root/phenotypes/PH286/version/572/export/codes/
R Package	`# Download here library(ConceptLibraryClient) # Connect to API client = connect_to_API(public=TRUE) # Get codelists of phenotype codelists = get_phenotype_code_list('PH286', '572', api_client=client)`

Version History

Version ID	Name	Owner	Publish date
572	Scleritis and episcleritis	ieuan.scanlon	2021-10-06	currently shown