Phenotype Library | phenotype: Scoliosis

Scoliosis

Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A

PH287

Version ID

574

Type

Disease or Syndrome

Data Sources

CPRD GOLD , HES Admitted Patient Care data for CPRD GOLD

Valid event data range

01/01/1999 - 01/07/2016

Sex

♀ Female ♂ Male

Agreement Date

2019-05-20

Coding system

Read codes v2 ICD10 codes Med codes

Collections

CALIBER Phenotype Library

Definition

At the specified date, a patient is defined as having had 'Scoliosis' IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:

Primary care

'Scoliosis' diagnosis or history of diagnosis or procedure during a consultation

OR Secondary care (ICD10)

ALL diagnoses of 'Scoliosis' or history of diagnosis during a hospitalization

Implementation

PhenoFlow Implementation:

https://kclhi.org/phenoflow/phenotype/download/835

Publications

Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3

Clinical Code List

CSV

JSON

XML

Expand All / Collapse All

C1507/4153 Scoliosis - Primary care - Read codes v2

Rows: 23

Code	Description	Disease	Medcode	Category
2376.00	O/E - kyphoscoliotic chest def	Scoliosis	7136.0	Diagnosis of Scoliosis
7J44111	Dwyer anterior wiring of spine for scoliosis	Scoliosis	22657.0	Procedure for Scoliosis
G411.00	Kyphoscoliotic heart disease	Scoliosis	42901.0	Diagnosis of Scoliosis
N373.00	Kyphoscoliosis and scoliosis	Scoliosis	714.0	Diagnosis of Scoliosis
N373000	Idiopathic scoliosis	Scoliosis	755.0	Diagnosis of Scoliosis
N373100	Idiopathic kyphoscoliosis	Scoliosis	14790.0	Diagnosis of Scoliosis
N373200	Resolving infantile idiopathic scoliosis	Scoliosis	36682.0	Diagnosis of Scoliosis
N373300	Progressive infantile idiopathic scoliosis	Scoliosis	45232.0	Diagnosis of Scoliosis
N373500	Thoracogenic scoliosis	Scoliosis	3059.0	Diagnosis of Scoliosis
N373600	Postural scoliosis	Scoliosis	3705.0	Diagnosis of Scoliosis
N373700	Adolescent idiopathic scoliosis	Scoliosis	12549.0	Diagnosis of Scoliosis
N373z00	Kyphoscoliosis or scoliosis NOS	Scoliosis	11620.0	Diagnosis of Scoliosis
N374300	Scoliosis associated with other condition	Scoliosis	40041.0	Diagnosis of Scoliosis
N374A00	Scoliosis in skeletal dysplasia	Scoliosis	64218.0	Diagnosis of Scoliosis
N374B00	Neuromuscular scoliosis	Scoliosis	45554.0	Diagnosis of Scoliosis
N374C00	Scoliosis in neurofibromatosis	Scoliosis	67445.0	Diagnosis of Scoliosis
N374D00	Scoliosis in connective tissue anomalies	Scoliosis	43192.0	Diagnosis of Scoliosis
Nyu5300	[X]Other idiopathic scoliosis	Scoliosis	72582.0	Diagnosis of Scoliosis
Nyu5400	[X]Other secondary scoliosis	Scoliosis	53874.0	Diagnosis of Scoliosis
Nyu5500	[X]Other forms of scoliosis	Scoliosis	56368.0	Diagnosis of Scoliosis
PE22.00	Congenital postural scoliosis	Scoliosis	4330.0	Diagnosis of Scoliosis
PE23.00	Congenital scoliosis due to congenital bony malformation	Scoliosis	9567.0	Diagnosis of Scoliosis
PG18.11	Congenital kyphoscoliosis	Scoliosis	28717.0	Diagnosis of Scoliosis

C1508/4155 Scoliosis - Primary care - Med codes

Rows: 23

Code	Description	Disease	ReadcodeDescr	Readcode
11620.0	Diagnosis of Scoliosis	Scoliosis	Kyphoscoliosis or scoliosis NOS	N373z00
12549.0	Diagnosis of Scoliosis	Scoliosis	Adolescent idiopathic scoliosis	N373700
14790.0	Diagnosis of Scoliosis	Scoliosis	Idiopathic kyphoscoliosis	N373100
22657.0	Procedure for Scoliosis	Scoliosis	Dwyer anterior wiring of spine for scoliosis	7J44111
28717.0	Diagnosis of Scoliosis	Scoliosis	Congenital kyphoscoliosis	PG18.11
3059.0	Diagnosis of Scoliosis	Scoliosis	Thoracogenic scoliosis	N373500
36682.0	Diagnosis of Scoliosis	Scoliosis	Resolving infantile idiopathic scoliosis	N373200
3705.0	Diagnosis of Scoliosis	Scoliosis	Postural scoliosis	N373600
40041.0	Diagnosis of Scoliosis	Scoliosis	Scoliosis associated with other condition	N374300
42901.0	Diagnosis of Scoliosis	Scoliosis	Kyphoscoliotic heart disease	G411.00
43192.0	Diagnosis of Scoliosis	Scoliosis	Scoliosis in connective tissue anomalies	N374D00
4330.0	Diagnosis of Scoliosis	Scoliosis	Congenital postural scoliosis	PE22.00
45232.0	Diagnosis of Scoliosis	Scoliosis	Progressive infantile idiopathic scoliosis	N373300
45554.0	Diagnosis of Scoliosis	Scoliosis	Neuromuscular scoliosis	N374B00
53874.0	Diagnosis of Scoliosis	Scoliosis	[X]Other secondary scoliosis	Nyu5400
56368.0	Diagnosis of Scoliosis	Scoliosis	[X]Other forms of scoliosis	Nyu5500
64218.0	Diagnosis of Scoliosis	Scoliosis	Scoliosis in skeletal dysplasia	N374A00
67445.0	Diagnosis of Scoliosis	Scoliosis	Scoliosis in neurofibromatosis	N374C00
7136.0	Diagnosis of Scoliosis	Scoliosis	O/E - kyphoscoliotic chest def	2376.00
714.0	Diagnosis of Scoliosis	Scoliosis	Kyphoscoliosis and scoliosis	N373.00
72582.0	Diagnosis of Scoliosis	Scoliosis	[X]Other idiopathic scoliosis	Nyu5300
755.0	Diagnosis of Scoliosis	Scoliosis	Idiopathic scoliosis	N373000
9567.0	Diagnosis of Scoliosis	Scoliosis	Congenital scoliosis due to congenital bony malformation	PE23.00

C1509/4157 Scoliosis - Secondary care - Diagnoses - ICD10 codes

Rows: 1

Code	Description	Disease	Category
M41	Scoliosis	Scoliosis	Diagnosis of Scoliosis

API

To Export Phenotype Details:

Format	API
XML	site_root/api/v1/public/phenotypes/PH287/version/574/detail/?format=xml
JSON	site_root/api/v1/public/phenotypes/PH287/version/574/detail/?format=json
R Package	`# Download here library(ConceptLibraryClient) # Connect to API client = connect_to_API(public=TRUE) # Get details of phenotype details = get_phenotype_detail_by_version('PH287', '574', api_client=client)`

To Export Phenotype Code List:

Format	API
XML	site_root/api/v1/public/phenotypes/PH287/version/574/export/codes/?format=xml
JSON	site_root/api/v1/public/phenotypes/PH287/version/574/export/codes/?format=json
CSV	site_root/phenotypes/PH287/version/574/export/codes/
R Package	`# Download here library(ConceptLibraryClient) # Connect to API client = connect_to_API(public=TRUE) # Get codelists of phenotype codelists = get_phenotype_code_list('PH287', '574', api_client=client)`

Version History

Version ID	Name	Owner	Publish date
574	Scoliosis	ieuan.scanlon	2021-10-06	currently shown