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Sick sinus syndrome

Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A

Type
Disease or Syndrome
ID
PH303
Version ID
606
Valid event data range
01/01/1999 - 01/07/2016
Sex
Female, Male
Agreement Date
2019-05-20
Coding system
Read codes v2 ICD10 codes Med codes
Tags /Collections
CALIBER Phenotype Library

Definition

At the specified date, a patient is defined as having had 'Sick sinus syndrome' IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:

Primary care

  1. 'Sick sinus syndrome' diagnosis or history of diagnosis during a consultation

OR Secondary care (ICD10)

  1. ALL diagnoses of 'Sick sinus syndrome' or history of diagnosis during a hospitalization

Implementation


Publications

  • Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3

Clinical Code List

Rows: 2
Code Description Disease Medcode Category
G57y300 Sick sinus syndrome Sick sinus syndrome 5576.0 Diagnosis of Sick sinus syndrome
G57y400 Sinoatrial node dysfunction NOS Sick sinus syndrome 7410.0 Diagnosis of Sick sinus syndrome
Rows: 2
Code Description Disease ReadcodeDescr Readcode
5576.0 Diagnosis of Sick sinus syndrome Sick sinus syndrome Sick sinus syndrome G57y300
7410.0 Diagnosis of Sick sinus syndrome Sick sinus syndrome Sinoatrial node dysfunction NOS G57y400
Rows: 1
Code Description Disease Category
I49.5 Sick sinus syndrome Sick sinus syndrome Diagnosis of Sick sinus syndrome

API

To Export Phenotype Details:

Format API
XML site_root/api/v1/public/phenotypes/PH303/version/606/detail/?format=xml
JSON site_root/api/v1/public/phenotypes/PH303/version/606/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of phenotype

details = get_phenotype_detail_by_version('PH303', '606', api_client=client)

To Export Phenotype Code List:

Format API
XML site_root/api/v1/public/phenotypes/PH303/version/606/export/codes/?format=xml
JSON site_root/api/v1/public/phenotypes/PH303/version/606/export/codes/?format=json
CSV site_root/phenotypes/PH303/version/606/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelists of phenotype

codelists = get_phenotype_code_list('PH303', '606', api_client=client)

Version History

Version
ID
Name Owner Publish date
606 Sick sinus syndrome ieuan.scanlon 2021-10-06 currently shown

Export - export all codes into a csv file/JSON/XML for the current phenotype version.

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