Phenotypes > Spondylolisthesis

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Spondylolisthesis

Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A

Type
Disease or Syndrome
ID
PH313
Version ID
626
Data Sources
CPRD GOLD , HES Admitted Patient Care data for CPRD GOLD
Valid event data range
01/01/1999 - 01/07/2016
Sex
Female, Male
Agreement Date
2019-05-20
Coding system
Read codes v2 ICD10 codes Med codes
Tags /Collections
CALIBER Phenotype Library

Definition

At the specified date, a patient is defined as having had 'Spondylolisthesis' IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:

Primary care

  1. 'Spondylolisthesis' diagnosis or history of diagnosis or procedure during a consultation

OR Secondary care (ICD10)

  1. ALL diagnoses of 'Spondylolisthesis' or history of diagnosis during a hospitalization

Implementation


https://kclhi.org/phenoflow/phenotype/download/914

Publications

  • Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3

Clinical Code List

Expand All  /  Collapse All
Rows: 14
Code Description Disease Medcode Category
7J34112 Buck fusion of lumbar spine for spondylolisthesis Spondylolisthesis 43211.0 Procedure for Spondylolisthesis
7J48500 Spondylolisthesis operation Spondylolisthesis 11250.0 Procedure for Spondylolisthesis
7J48511 Gill excision of spondylolisthesis Spondylolisthesis 63967.0 Procedure for Spondylolisthesis
7J48K00 Reduction of spondylolisthesis and fusion Spondylolisthesis 20734.0 Procedure for Spondylolisthesis
7J48L00 Fusion spondylolisthesis in situ Spondylolisthesis 16743.0 Procedure for Spondylolisthesis
N384.00 Acquired spondylolisthesis Spondylolisthesis 2895.0 Diagnosis of Spondylolisthesis
N384000 Dysplastic spondylolisthesis Spondylolisthesis 65017.0 Diagnosis of Spondylolisthesis
N384100 Isthmic spondylolisthesis Spondylolisthesis 61817.0 Diagnosis of Spondylolisthesis
N384200 Degenerative spondylolisthesis Spondylolisthesis 12371.0 Diagnosis of Spondylolisthesis
N384300 Pedicular spondylolisthesis Spondylolisthesis 66732.0 Diagnosis of Spondylolisthesis
Zw04600 [Q] Spondylolisthesis grade 1 Spondylolisthesis 52889.0 Diagnosis of Spondylolisthesis
Zw04700 [Q] Spondylolisthesis grade 2 Spondylolisthesis 53931.0 Diagnosis of Spondylolisthesis
Zw04800 [Q] Spondylolisthesis grade 3 Spondylolisthesis 73565.0 Diagnosis of Spondylolisthesis
Zw04900 [Q] Spondylolisthesis grade 4 Spondylolisthesis 104348.0 Diagnosis of Spondylolisthesis
Rows: 14
Code Description Disease ReadcodeDescr Readcode
104348.0 Diagnosis of Spondylolisthesis Spondylolisthesis [Q] Spondylolisthesis grade 4 Zw04900
11250.0 Procedure for Spondylolisthesis Spondylolisthesis Spondylolisthesis operation 7J48500
12371.0 Diagnosis of Spondylolisthesis Spondylolisthesis Degenerative spondylolisthesis N384200
16743.0 Procedure for Spondylolisthesis Spondylolisthesis Fusion spondylolisthesis in situ 7J48L00
20734.0 Procedure for Spondylolisthesis Spondylolisthesis Reduction of spondylolisthesis and fusion 7J48K00
2895.0 Diagnosis of Spondylolisthesis Spondylolisthesis Acquired spondylolisthesis N384.00
43211.0 Procedure for Spondylolisthesis Spondylolisthesis Buck fusion of lumbar spine for spondylolisthesis 7J34112
52889.0 Diagnosis of Spondylolisthesis Spondylolisthesis [Q] Spondylolisthesis grade 1 Zw04600
53931.0 Diagnosis of Spondylolisthesis Spondylolisthesis [Q] Spondylolisthesis grade 2 Zw04700
61817.0 Diagnosis of Spondylolisthesis Spondylolisthesis Isthmic spondylolisthesis N384100
63967.0 Procedure for Spondylolisthesis Spondylolisthesis Gill excision of spondylolisthesis 7J48511
65017.0 Diagnosis of Spondylolisthesis Spondylolisthesis Dysplastic spondylolisthesis N384000
66732.0 Diagnosis of Spondylolisthesis Spondylolisthesis Pedicular spondylolisthesis N384300
73565.0 Diagnosis of Spondylolisthesis Spondylolisthesis [Q] Spondylolisthesis grade 3 Zw04800
Rows: 1
Code Description Disease Category
M43.1 Spondylolisthesis Spondylolisthesis Diagnosis of Spondylolisthesis

API

To Export Phenotype Details:

Format API
XML site_root/api/v1/public/phenotypes/PH313/version/626/detail/?format=xml
JSON site_root/api/v1/public/phenotypes/PH313/version/626/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of phenotype

details = get_phenotype_detail_by_version('PH313', '626', api_client=client)

To Export Phenotype Code List:

Format API
XML site_root/api/v1/public/phenotypes/PH313/version/626/export/codes/?format=xml
JSON site_root/api/v1/public/phenotypes/PH313/version/626/export/codes/?format=json
CSV site_root/phenotypes/PH313/version/626/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelists of phenotype

codelists = get_phenotype_code_list('PH313', '626', api_client=client)

Version History

Version
ID		 Name Owner Publish date
626 Spondylolisthesis ieuan.scanlon 2021-10-06 currently shown

Export - export all codes into a csv file/JSON/XML for the current phenotype version.

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