COVID Identification

PH3368 / 8387

OpenSAFELY

Jan 26, 2026

REGISTERING DOI...

OpenCodelists Phenotype

  1. Overview

    Codelist ID
    opensafely/covid-identification
    Version ID
    7bbfd8eb
    Version Tag
    2020-06-03
    Coding System
    ICD10 codes
    Collections
    OpenCodelistPhenotype Library
    Tags
    No data

  2. Definition

    This codelist was taken from OpenCodelists, created by OpenSAFELY. We recommend viewing this Phenotype on the OpenCodelist website to view the most recent version.

    The following two ICD-10 codes for COVID identification have been used

    U07.1 virus identified Use this code when COVID-19 has been confirmed by laboratory testing irrespective of severity of clinical signs or symptoms. Use additional code, if desired, to identify pneumonia or other manifestations.

    U07.2 COVID-19, virus not identified Use this code when COVID-19 is diagnosed clinically or epidemiologically but laboratory testing is inconclusive or not available. Use additional code, if desired, to identify pneumonia or other manifestations

    © University of Oxford for the Bennett Institute for Applied Data Science 2025. This work may be copied freely for non-commercial research and study.

  3. Methodology

    We conducted a manual search of WHO ICD-10 browser to find codes related to COVID.

  4. References

    Source Reference

    https://www.opencodelists.org/codelist/opensafely/covid-identification/2020-06-03

    References

  5. Clinical Codelist

  6. API

    To Export Phenotype Details:

    FormatAPI
    JSON site_root/api/v1/phenotypes/PH3368/version/8387/detail/?format=json
    R Package

    # Download here

    library(ConceptLibraryClient)


    # Connect to API

    client = ConceptLibraryClient::Connection$new(public=TRUE)


    # Get details of Phenotype

    phenotype_details = client$phenotypes$get_detail(
     'PH3368',
     version_id=8387
    )

    Py Package

    # Download here

    from pyconceptlibraryclient import Client


    # Connect to API

    client = Client(public=True)


    # Get details of Phenotype

    phenotype_detail = client.phenotypes.get_detail(
     'PH3368',
     version_id=8387
    )

    To Export Phenotype Code List:

    FormatAPI
    JSON site_root/api/v1/phenotypes/PH3368/version/8387/export/codes/?format=json
    R Package

    # Download here

    library(ConceptLibraryClient)


    # Connect to API

    client = ConceptLibraryClient::Connection$new(public=TRUE)


    # Get codelist of Phenotype

    phenotype_codelist = client$phenotypes$get_codelist(
     'PH3368',
     version_id=8387
    )

    Py Package

    # Download here

    from pyconceptlibraryclient import Client


    # Connect to API

    client = Client(public=True)


    # Get codelist of Phenotype

    phenotype_codelist = client.phenotypes.get_codelist(
     'PH3368',
     version_id=8387
    )

  7. Version History

    Version IDNameOwnerPublish date
    COVID Identification ieuan.scanlon2026-01-26 23:14