Phenotype Library | phenotype: Abdominal aortic aneurysm

Abdominal aortic aneurysm

Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A

PH34

Version ID

Type

Disease or Syndrome

Data Sources

CPRD GOLD , HES Admitted Patient Care data for CPRD GOLD

Valid event data range

01/01/1999 - 01/07/2016

Sex

♀ Female ♂ Male

Agreement Date

2019-05-20

Coding system

Read codes v2 ICD10 codes Med codes

Collections

CALIBER Phenotype Library

Definition

Use MODIFIED CALIBER 'Abdominal aortic aneurysm' phenotyping algorithm:

At the specified date, a patient is considered to have an 'Abdominal aortic aneurysm' IF they meet any of the criteria below on or before the specified date.

The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:

Primary care
1. Diagnosis of AAA during a consultation: arterial_gprd: category 4
2. Performance of emergency AAA repair procedure recording during a consultation: aaa_ops_gprd: category 3
3. History of AAA during a consultation. The following Read code from CPRD:
4. Read:14AE.00 Medcode:16993 Descr:H/O: aortic aneurysm
Secondary care
1. Diagnosis of AAA as the primary or secondary diagnosis of any hospitalization: arterial_hes: category 4
2. Performance of emergency AAA repair procedure recorded: aaa_ops_opcs: category 3

Implementation

PhenoFlow Implementation:

https://kclhi.org/phenoflow/phenotype/download/118

Publications

Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3

Clinical Code List

CSV

JSON

XML

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C783/2705 Abdominal aortic aneurysm - Primary care - Read codes v2

Rows: 15

Code	Description	Disease	Medcode	Category
14AE.00	H/O: aortic aneurysm	Abdominal aortic aneurysm	16993	History of AAA (1)
7A11000	Emerg repl aneurysm bifurc aorta by anast aorta to fem art	Abdominal aortic aneurysm	96654	Emergency AAA repair (3)
7A11200	Emerg repl aneurysm bifurc aorta by anast aorta to iliac a	Abdominal aortic aneurysm	69922	Emergency AAA repair (3)
7A11211	Y graft of abdominal Aortic aneurysm (emergency)	Abdominal aortic aneurysm	92925	Emergency AAA repair (3)
7A13.00	Emergency replacement of aneurysmal segment of aorta	Abdominal aortic aneurysm	31613	Emergency AAA repair (3)
7A13.11	Emergency repair of aortic aneurysm	Abdominal aortic aneurysm	17220	Emergency AAA repair (3)
7A13300	Emerg replace aneurysm infrarenal aorta by anast aorta/aorta	Abdominal aortic aneurysm	66232	Emergency AAA repair (3)
7A13400	Emerg replace aneurysm abdom aorta by anast aorta/aorta NEC	Abdominal aortic aneurysm	54192	Emergency AAA repair (3)
7A13411	Tube graft abdominal Aortic aneurysm (emergency)	Abdominal aortic aneurysm	63408	Emergency AAA repair (3)
7A13y00	Emergency replacement of aneurysmal segment of aorta OS	Abdominal aortic aneurysm	45477	Emergency AAA repair (3)
7A13z00	Emergency replacement of aneurysmal segment of aorta NOS	Abdominal aortic aneurysm	45474	Emergency AAA repair (3)
G714.00	Abdominal aortic aneurysm without mention of rupture	Abdominal aortic aneurysm	1867	AAA without leak or rupture (4)
G714.11	AAA - Abdominal aortic aneurysm without mention of rupture	Abdominal aortic aneurysm	17345	AAA without leak or rupture (4)
G716.00	Aortic aneurysm without mention of rupture NOS	Abdominal aortic aneurysm	16034	AAA without leak or rupture (4)
G716000	Thoracoabdominal aortic aneurysm, without mention of rupture	Abdominal aortic aneurysm	40787	AAA without leak or rupture (4)

C784/2707 Abdominal aortic aneurysm - Primary care - Med codes

Rows: 15

Code	Description	Disease	ReadcodeDescr	Readcode
16034	AAA without leak or rupture (4)	Abdominal aortic aneurysm	Aortic aneurysm without mention of rupture NOS	G716.00
16993	History of AAA (1)	Abdominal aortic aneurysm	H/O: aortic aneurysm	14AE.00
17220	Emergency AAA repair (3)	Abdominal aortic aneurysm	Emergency repair of aortic aneurysm	7A13.11
17345	AAA without leak or rupture (4)	Abdominal aortic aneurysm	AAA - Abdominal aortic aneurysm without mention of rupture	G714.11
1867	AAA without leak or rupture (4)	Abdominal aortic aneurysm	Abdominal aortic aneurysm without mention of rupture	G714.00
31613	Emergency AAA repair (3)	Abdominal aortic aneurysm	Emergency replacement of aneurysmal segment of aorta	7A13.00
40787	AAA without leak or rupture (4)	Abdominal aortic aneurysm	Thoracoabdominal aortic aneurysm, without mention of rupture	G716000
45474	Emergency AAA repair (3)	Abdominal aortic aneurysm	Emergency replacement of aneurysmal segment of aorta NOS	7A13z00
45477	Emergency AAA repair (3)	Abdominal aortic aneurysm	Emergency replacement of aneurysmal segment of aorta OS	7A13y00
54192	Emergency AAA repair (3)	Abdominal aortic aneurysm	Emerg replace aneurysm abdom aorta by anast aorta/aorta NEC	7A13400
63408	Emergency AAA repair (3)	Abdominal aortic aneurysm	Tube graft abdominal Aortic aneurysm (emergency)	7A13411
66232	Emergency AAA repair (3)	Abdominal aortic aneurysm	Emerg replace aneurysm infrarenal aorta by anast aorta/aorta	7A13300
69922	Emergency AAA repair (3)	Abdominal aortic aneurysm	Emerg repl aneurysm bifurc aorta by anast aorta to iliac a	7A11200
92925	Emergency AAA repair (3)	Abdominal aortic aneurysm	Y graft of abdominal Aortic aneurysm (emergency)	7A11211
96654	Emergency AAA repair (3)	Abdominal aortic aneurysm	Emerg repl aneurysm bifurc aorta by anast aorta to fem art	7A11000

C785/2709 Abdominal aortic aneurysm - Secondary care - Diagnoses - ICD10 codes

Rows: 3

Code	Description	Disease	Category
I714	Abdominal aortic aneurysm, without mention of rupture	Abdominal aortic aneurysm	AAA without leak or rupture
I716	Thoracoabdominal aortic aneurysm, without mention of rupture	Abdominal aortic aneurysm	AAA without leak or rupture
I719	Aortic aneurysm of unspecified site, without mention of rupture	Abdominal aortic aneurysm	AAA without leak or rupture

API

To Export Phenotype Details:

Format	API
XML	site_root/api/v1/public/phenotypes/PH34/version/68/detail/?format=xml
JSON	site_root/api/v1/public/phenotypes/PH34/version/68/detail/?format=json
R Package	`# Download here library(ConceptLibraryClient) # Connect to API client = connect_to_API(public=TRUE) # Get details of phenotype details = get_phenotype_detail_by_version('PH34', '68', api_client=client)`

To Export Phenotype Code List:

Format	API
XML	site_root/api/v1/public/phenotypes/PH34/version/68/export/codes/?format=xml
JSON	site_root/api/v1/public/phenotypes/PH34/version/68/export/codes/?format=json
CSV	site_root/phenotypes/PH34/version/68/export/codes/
R Package	`# Download here library(ConceptLibraryClient) # Connect to API client = connect_to_API(public=TRUE) # Get codelists of phenotype codelists = get_phenotype_code_list('PH34', '68', api_client=client)`

Version History

Version ID	Name	Owner	Publish date
68	Abdominal aortic aneurysm	ieuan.scanlon	2021-10-06	currently shown