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Abdominal aortic aneurysm

Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A

Type
Disease or Syndrome
ID
PH34
Version ID
68
Valid event data range
01/01/1999 - 01/07/2016
Sex
Female, Male
Agreement Date
2019-05-20
Coding system
Read codes v2 ICD10 codes Med codes
Tags /Collections
CALIBER Phenotype Library

Definition

Use MODIFIED CALIBER 'Abdominal aortic aneurysm' phenotyping algorithm:

At the specified date, a patient is considered to have an 'Abdominal aortic aneurysm' IF they meet any of the criteria below on or before the specified date.

The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:

  1. Primary care

    1. Diagnosis of AAA during a consultation: arterial_gprd: category 4

    2. Performance of emergency AAA repair procedure recording during a consultation: aaa_ops_gprd: category 3

    3. History of AAA during a consultation. The following Read code from CPRD:

    4. Read:14AE.00 Medcode:16993 Descr:H/O: aortic aneurysm

  2. Secondary care

    1. Diagnosis of AAA as the primary or secondary diagnosis of any hospitalization: arterial_hes: category 4

    2. Performance of emergency AAA repair procedure recorded: aaa_ops_opcs: category 3

Implementation


Publications

  • Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3

Clinical Code List

Rows: 15
Code Description Disease Medcode Category
14AE.00 H/O: aortic aneurysm Abdominal aortic aneurysm 16993 History of AAA (1)
7A11000 Emerg repl aneurysm bifurc aorta by anast aorta to fem art Abdominal aortic aneurysm 96654 Emergency AAA repair (3)
7A11200 Emerg repl aneurysm bifurc aorta by anast aorta to iliac a Abdominal aortic aneurysm 69922 Emergency AAA repair (3)
7A11211 Y graft of abdominal Aortic aneurysm (emergency) Abdominal aortic aneurysm 92925 Emergency AAA repair (3)
7A13.00 Emergency replacement of aneurysmal segment of aorta Abdominal aortic aneurysm 31613 Emergency AAA repair (3)
7A13.11 Emergency repair of aortic aneurysm Abdominal aortic aneurysm 17220 Emergency AAA repair (3)
7A13300 Emerg replace aneurysm infrarenal aorta by anast aorta/aorta Abdominal aortic aneurysm 66232 Emergency AAA repair (3)
7A13400 Emerg replace aneurysm abdom aorta by anast aorta/aorta NEC Abdominal aortic aneurysm 54192 Emergency AAA repair (3)
7A13411 Tube graft abdominal Aortic aneurysm (emergency) Abdominal aortic aneurysm 63408 Emergency AAA repair (3)
7A13y00 Emergency replacement of aneurysmal segment of aorta OS Abdominal aortic aneurysm 45477 Emergency AAA repair (3)
7A13z00 Emergency replacement of aneurysmal segment of aorta NOS Abdominal aortic aneurysm 45474 Emergency AAA repair (3)
G714.00 Abdominal aortic aneurysm without mention of rupture Abdominal aortic aneurysm 1867 AAA without leak or rupture (4)
G714.11 AAA - Abdominal aortic aneurysm without mention of rupture Abdominal aortic aneurysm 17345 AAA without leak or rupture (4)
G716.00 Aortic aneurysm without mention of rupture NOS Abdominal aortic aneurysm 16034 AAA without leak or rupture (4)
G716000 Thoracoabdominal aortic aneurysm, without mention of rupture Abdominal aortic aneurysm 40787 AAA without leak or rupture (4)
Rows: 15
Code Description Disease ReadcodeDescr Readcode
16034 AAA without leak or rupture (4) Abdominal aortic aneurysm Aortic aneurysm without mention of rupture NOS G716.00
16993 History of AAA (1) Abdominal aortic aneurysm H/O: aortic aneurysm 14AE.00
17220 Emergency AAA repair (3) Abdominal aortic aneurysm Emergency repair of aortic aneurysm 7A13.11
17345 AAA without leak or rupture (4) Abdominal aortic aneurysm AAA - Abdominal aortic aneurysm without mention of rupture G714.11
1867 AAA without leak or rupture (4) Abdominal aortic aneurysm Abdominal aortic aneurysm without mention of rupture G714.00
31613 Emergency AAA repair (3) Abdominal aortic aneurysm Emergency replacement of aneurysmal segment of aorta 7A13.00
40787 AAA without leak or rupture (4) Abdominal aortic aneurysm Thoracoabdominal aortic aneurysm, without mention of rupture G716000
45474 Emergency AAA repair (3) Abdominal aortic aneurysm Emergency replacement of aneurysmal segment of aorta NOS 7A13z00
45477 Emergency AAA repair (3) Abdominal aortic aneurysm Emergency replacement of aneurysmal segment of aorta OS 7A13y00
54192 Emergency AAA repair (3) Abdominal aortic aneurysm Emerg replace aneurysm abdom aorta by anast aorta/aorta NEC 7A13400
63408 Emergency AAA repair (3) Abdominal aortic aneurysm Tube graft abdominal Aortic aneurysm (emergency) 7A13411
66232 Emergency AAA repair (3) Abdominal aortic aneurysm Emerg replace aneurysm infrarenal aorta by anast aorta/aorta 7A13300
69922 Emergency AAA repair (3) Abdominal aortic aneurysm Emerg repl aneurysm bifurc aorta by anast aorta to iliac a 7A11200
92925 Emergency AAA repair (3) Abdominal aortic aneurysm Y graft of abdominal Aortic aneurysm (emergency) 7A11211
96654 Emergency AAA repair (3) Abdominal aortic aneurysm Emerg repl aneurysm bifurc aorta by anast aorta to fem art 7A11000
Rows: 3
Code Description Disease Category
I714 Abdominal aortic aneurysm, without mention of rupture Abdominal aortic aneurysm AAA without leak or rupture
I716 Thoracoabdominal aortic aneurysm, without mention of rupture Abdominal aortic aneurysm AAA without leak or rupture
I719 Aortic aneurysm of unspecified site, without mention of rupture Abdominal aortic aneurysm AAA without leak or rupture

API

To Export Phenotype Details:

Format API
XML site_root/api/v1/public/phenotypes/PH34/version/68/detail/?format=xml
JSON site_root/api/v1/public/phenotypes/PH34/version/68/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of phenotype

details = get_phenotype_detail_by_version('PH34', '68', api_client=client)

To Export Phenotype Code List:

Format API
XML site_root/api/v1/public/phenotypes/PH34/version/68/export/codes/?format=xml
JSON site_root/api/v1/public/phenotypes/PH34/version/68/export/codes/?format=json
CSV site_root/phenotypes/PH34/version/68/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelists of phenotype

codelists = get_phenotype_code_list('PH34', '68', api_client=client)

Version History

Version
ID
Name Owner Publish date
68 Abdominal aortic aneurysm ieuan.scanlon 2021-10-06 currently shown

Export - export all codes into a csv file/JSON/XML for the current phenotype version.

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