Phenotype Library | phenotype: Tryglicerides

Tryglicerides

Shah A

PH352

Version ID

704

Type

Biomarker

Data Sources

CPRD GOLD

Valid event data range

01/01/1999 - 01/07/2016

Sex

♀ Female ♂ Male

Agreement Date

2012-11-23

Coding system

Read codes v2

Collections

Phenotype Library

Definition

In the Clinical Practice Research Datalink (CPRD, primary care data) we extracted triglyceride measurements using the structured data component of the test CPRD table (entity type 202 and 288) combined with the Read terms below.

Measurements were extracted from the data2 field and units from the data3 field. We extracted all values recorded in mmol/L (SUM lookup 96) or mg/dL (SUM lookup 82) and filtered out values below 0 or above 50 mmol/L. Where multiple measurements were present in a single consultation (identified by the consid identifier) we calculated the average.

Implementation

PhenoFlow Implementation:

https://kclhi.org/phenoflow/phenotype/download/1027

Publications

No data available

Clinical Code List

CSV

JSON

XML

Expand All / Collapse All

C1680/4498 Tryglicerides - Primary Care - Plasma measurements - Read codes v2

Rows: 3

Code	Description
44O8.00	Plasma VLDL triglyceride level
44e..00	Plasma triglyceride level
44e0.00	Plasma random triglyceride level

C1681/4500 Tryglicerides - Primary Care - Serum measurements - Read codes v2

Rows: 3

Code	Description
44Q1.00	Serum triglycerides normal
44Q2.00	Serum triglycerides borderline
44Q3.00	Serum triglycerides raised

API

To Export Phenotype Details:

Format	API
XML	site_root/api/v1/public/phenotypes/PH352/version/704/detail/?format=xml
JSON	site_root/api/v1/public/phenotypes/PH352/version/704/detail/?format=json
R Package	`# Download here library(ConceptLibraryClient) # Connect to API client = connect_to_API(public=TRUE) # Get details of phenotype details = get_phenotype_detail_by_version('PH352', '704', api_client=client)`

To Export Phenotype Code List:

Format	API
XML	site_root/api/v1/public/phenotypes/PH352/version/704/export/codes/?format=xml
JSON	site_root/api/v1/public/phenotypes/PH352/version/704/export/codes/?format=json
CSV	site_root/phenotypes/PH352/version/704/export/codes/
R Package	`# Download here library(ConceptLibraryClient) # Connect to API client = connect_to_API(public=TRUE) # Get codelists of phenotype codelists = get_phenotype_code_list('PH352', '704', api_client=client)`

Version History

Version ID	Name	Owner	Publish date
704	Tryglicerides	ieuan.scanlon	2021-10-06	currently shown