Use MODIFIED CALIBER 'Atrial fibrillation' phenotyping algorithm:
At the specified date, a patient is considered to have had 'Atrial fibrillation' or flutter IF they meet any of the criteria below on or before the specified date.
The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:
Historical & Diagnosed: first recorded AF code indicates monitoring of an existing condition, or reference to a previous AF diagnosis, or a diagnosis code for AF; preference given to the earliest dated record rather than diagnosis source (i.e. no preference for primary versus secondary care).
af_gprd: category 1, 2, 3, 4, 5, 6, 7
af_hes: category 6
Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3
Code | Description | Disease | Medcode | Category |
---|---|---|---|---|
14AN.00 | H/O: atrial fibrillation | Atrial fibrillation | 6345 | History of atrial fibrillation or flutter (1) |
14AR.00 | History of atrial flutter | Atrial fibrillation | 93460 | History of atrial fibrillation or flutter (1) |
212R.00 | Atrial fibrillation resolved | Atrial fibrillation | 28994 | History of atrial fibrillation or flutter (1) |
3272.00 | ECG: atrial fibrillation | Atrial fibrillation | 3757 | Atrial fibrillation, not otherwise specified (5) |
3273.00 | ECG: atrial flutter | Atrial fibrillation | 6771 | Atrial flutter (7) |
662S.00 | Atrial fibrillation monitoring | Atrial fibrillation | 18746 | Atrial fibrillation monitoring (2) |
6A9..00 | Atrial fibrillation annual review | Atrial fibrillation | 45773 | Atrial fibrillation monitoring (2) |
9Os..00 | Atrial fibrillation monitoring administration | Atrial fibrillation | 57832 | Atrial fibrillation monitoring (2) |
9Os0.00 | Atrial fibrillation monitoring first letter | Atrial fibrillation | 90187 | Atrial fibrillation monitoring (2) |
9Os1.00 | Atrial fibrillation monitoring second letter | Atrial fibrillation | 90188 | Atrial fibrillation monitoring (2) |
9Os2.00 | Atrial fibrillation monitoring third letter | Atrial fibrillation | 90189 | Atrial fibrillation monitoring (2) |
9Os3.00 | Atrial fibrillation monitoring verbal invite | Atrial fibrillation | 90190 | Atrial fibrillation monitoring (2) |
9Os4.00 | Atrial fibrillation monitoring telephone invite | Atrial fibrillation | 90191 | Atrial fibrillation monitoring (2) |
9hF..00 | Exception reporting: atrial fibrillation quality indicators | Atrial fibrillation | 63350 | Atrial fibrillation monitoring (2) |
9hF1.00 | Excepted from atrial fibrillation qual indic: Inform dissent | Atrial fibrillation | 39114 | Atrial fibrillation monitoring (2) |
G573.00 | Atrial fibrillation and flutter | Atrial fibrillation | 2212 | Atrial fibrillation or flutter (6) |
G573000 | Atrial fibrillation | Atrial fibrillation | 1664 | Atrial fibrillation, not otherwise specified (5) |
G573100 | Atrial flutter | Atrial fibrillation | 1757 | Atrial flutter (7) |
G573200 | Paroxysmal atrial fibrillation | Atrial fibrillation | 1268 | Paroxysmal atrial fibrillation (3) |
G573300 | Non-rheumatic atrial fibrillation | Atrial fibrillation | 35127 | Atrial fibrillation, not otherwise specified (5) |
G573400 | Permanent atrial fibrillation | Atrial fibrillation | 96277 | Persistent or permanent atrial fibrillation (4) |
G573500 | Persistent atrial fibrillation | Atrial fibrillation | 96076 | Persistent or permanent atrial fibrillation (4) |
G573z00 | Atrial fibrillation and flutter NOS | Atrial fibrillation | 23437 | Atrial fibrillation or flutter (6) |
Code | Description | Disease | ReadcodeDescr | Readcode |
---|---|---|---|---|
1268 | Paroxysmal atrial fibrillation (3) | Atrial fibrillation | Paroxysmal atrial fibrillation | G573200 |
1664 | Atrial fibrillation, not otherwise specified (5) | Atrial fibrillation | Atrial fibrillation | G573000 |
1757 | Atrial flutter (7) | Atrial fibrillation | Atrial flutter | G573100 |
18746 | Atrial fibrillation monitoring (2) | Atrial fibrillation | Atrial fibrillation monitoring | 662S.00 |
2212 | Atrial fibrillation or flutter (6) | Atrial fibrillation | Atrial fibrillation and flutter | G573.00 |
23437 | Atrial fibrillation or flutter (6) | Atrial fibrillation | Atrial fibrillation and flutter NOS | G573z00 |
28994 | History of atrial fibrillation or flutter (1) | Atrial fibrillation | Atrial fibrillation resolved | 212R.00 |
35127 | Atrial fibrillation, not otherwise specified (5) | Atrial fibrillation | Non-rheumatic atrial fibrillation | G573300 |
3757 | Atrial fibrillation, not otherwise specified (5) | Atrial fibrillation | ECG: atrial fibrillation | 3272.00 |
39114 | Atrial fibrillation monitoring (2) | Atrial fibrillation | Excepted from atrial fibrillation qual indic: Inform dissent | 9hF1.00 |
45773 | Atrial fibrillation monitoring (2) | Atrial fibrillation | Atrial fibrillation annual review | 6A9..00 |
57832 | Atrial fibrillation monitoring (2) | Atrial fibrillation | Atrial fibrillation monitoring administration | 9Os..00 |
63350 | Atrial fibrillation monitoring (2) | Atrial fibrillation | Exception reporting: atrial fibrillation quality indicators | 9hF..00 |
6345 | History of atrial fibrillation or flutter (1) | Atrial fibrillation | H/O: atrial fibrillation | 14AN.00 |
6771 | Atrial flutter (7) | Atrial fibrillation | ECG: atrial flutter | 3273.00 |
90187 | Atrial fibrillation monitoring (2) | Atrial fibrillation | Atrial fibrillation monitoring first letter | 9Os0.00 |
90188 | Atrial fibrillation monitoring (2) | Atrial fibrillation | Atrial fibrillation monitoring second letter | 9Os1.00 |
90189 | Atrial fibrillation monitoring (2) | Atrial fibrillation | Atrial fibrillation monitoring third letter | 9Os2.00 |
90190 | Atrial fibrillation monitoring (2) | Atrial fibrillation | Atrial fibrillation monitoring verbal invite | 9Os3.00 |
90191 | Atrial fibrillation monitoring (2) | Atrial fibrillation | Atrial fibrillation monitoring telephone invite | 9Os4.00 |
93460 | History of atrial fibrillation or flutter (1) | Atrial fibrillation | History of atrial flutter | 14AR.00 |
96076 | Persistent or permanent atrial fibrillation (4) | Atrial fibrillation | Persistent atrial fibrillation | G573500 |
96277 | Persistent or permanent atrial fibrillation (4) | Atrial fibrillation | Permanent atrial fibrillation | G573400 |
Code | Description | Disease | Category |
---|---|---|---|
I48 | Atrial fibrillation and flutter | Atrial fibrillation | Fibrillation and flutter |
To Export Phenotype Details:
Format | API |
---|---|
XML | site_root/api/v1/public/phenotypes/PH36/version/72/detail/?format=xml |
JSON | site_root/api/v1/public/phenotypes/PH36/version/72/detail/?format=json |
R Package |
|
To Export Phenotype Code List:
Format | API |
---|---|
XML | site_root/api/v1/public/phenotypes/PH36/version/72/export/codes/?format=xml |
JSON | site_root/api/v1/public/phenotypes/PH36/version/72/export/codes/?format=json |
CSV | site_root/phenotypes/PH36/version/72/export/codes/ |
R Package |
|
Version ID |
Name | Owner | Publish date | |
---|---|---|---|---|
72 | Atrial fibrillation | ieuan.scanlon | 2021-10-06 | currently shown |
Export - export all codes into a csv file/JSON/XML for the current phenotype version.
Print - Print page.