Respiratory Virus (Unspecified) Identification (Secondary Care)

PH3692 / 8805

OpenSAFELY

Jan 26, 2026

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OpenCodelists Phenotype

  1. Overview

    Codelist ID
    opensafely/respiratory-virus-unspecified-identification-secondary-care
    Version ID
    65b1b1fe
    Coding System
    ICD10 codes
    Collections
    OpenCodelistPhenotype Library
    Tags
    No data

  2. Definition

    This codelist was taken from OpenCodelists, created by OpenSAFELY. We recommend viewing this Phenotype on the OpenCodelist website to view the most recent version.

    Codelist for identifying repsiratory infections in secondary care which have no identified pathogen. For additional case identification in older adults, COPD and Asthma exacerbations can be recorded as cases (see references).

    © University of Oxford for the Bennett Institute for Applied Data Science 2025. This work may be copied freely for non-commercial research and study.

  3. Methodology

    Codelist checked by Jennifer Quint. To see full outcome phenotypes see Github issue in references

  4. References

    Source Reference

    https://www.opencodelists.org/codelist/opensafely/respiratory-virus-unspecified-identification-secondary-care/65b1b1fe

    References

  5. Clinical Codelist

  6. API

    To Export Phenotype Details:

    FormatAPI
    JSON site_root/api/v1/phenotypes/PH3692/version/8805/detail/?format=json
    R Package

    # Download here

    library(ConceptLibraryClient)


    # Connect to API

    client = ConceptLibraryClient::Connection$new(public=TRUE)


    # Get details of Phenotype

    phenotype_details = client$phenotypes$get_detail(
     'PH3692',
     version_id=8805
    )

    Py Package

    # Download here

    from pyconceptlibraryclient import Client


    # Connect to API

    client = Client(public=True)


    # Get details of Phenotype

    phenotype_detail = client.phenotypes.get_detail(
     'PH3692',
     version_id=8805
    )

    To Export Phenotype Code List:

    FormatAPI
    JSON site_root/api/v1/phenotypes/PH3692/version/8805/export/codes/?format=json
    R Package

    # Download here

    library(ConceptLibraryClient)


    # Connect to API

    client = ConceptLibraryClient::Connection$new(public=TRUE)


    # Get codelist of Phenotype

    phenotype_codelist = client$phenotypes$get_codelist(
     'PH3692',
     version_id=8805
    )

    Py Package

    # Download here

    from pyconceptlibraryclient import Client


    # Connect to API

    client = Client(public=True)


    # Get codelist of Phenotype

    phenotype_codelist = client.phenotypes.get_codelist(
     'PH3692',
     version_id=8805
    )

  7. Version History

    Version IDNameOwnerPublish date
    Respiratory Virus (Unspecified) Identification (Secondary Care) ieuan.scanlon2026-01-26 23:29
    8804 Respiratory Virus (Unspecified) Identification (Secondary Care) ieuan.scanlon2026-01-26 23:29