Vitamin D Deficiency

PH3801 / 8954

OpenSAFELY

Jan 26, 2026

REGISTERING DOI...

OpenCodelists Phenotype

  1. Overview

    Codelist ID
    opensafely/vitamin-d-deficiency
    Version ID
    05ff5426
    Coding System
    SNOMED CT codes
    Collections
    OpenCodelistPhenotype Library
    Tags
    No data

  2. Definition

    This codelist was taken from OpenCodelists, created by OpenSAFELY. We recommend viewing this Phenotype on the OpenCodelist website to view the most recent version.

    Codes which indicate that vitamin D deficiency exists.

    © University of Oxford for the Bennett Institute for Applied Data Science 2025. This work may be copied freely for non-commercial research and study.

  3. Methodology

    Search terms / synonyms / search strategy: Vitamin D deficiency

    Inclusion criteria for codes: Refers to vitamin D deficiency

    Exclusion criteria for codes: Does not refer to vitamin D deficiency

    Borderline cases: Codes which may refer to complications associated with vitamin D deficiency rather than vitamin D deficiency itself were excluded.

  4. References

    Source Reference

    https://www.opencodelists.org/codelist/opensafely/vitamin-d-deficiency/05ff5426

    References

  5. Clinical Codelist

  6. API

    To Export Phenotype Details:

    FormatAPI
    JSON site_root/api/v1/phenotypes/PH3801/version/8954/detail/?format=json
    R Package

    # Download here

    library(ConceptLibraryClient)


    # Connect to API

    client = ConceptLibraryClient::Connection$new(public=TRUE)


    # Get details of Phenotype

    phenotype_details = client$phenotypes$get_detail(
     'PH3801',
     version_id=8954
    )

    Py Package

    # Download here

    from pyconceptlibraryclient import Client


    # Connect to API

    client = Client(public=True)


    # Get details of Phenotype

    phenotype_detail = client.phenotypes.get_detail(
     'PH3801',
     version_id=8954
    )

    To Export Phenotype Code List:

    FormatAPI
    JSON site_root/api/v1/phenotypes/PH3801/version/8954/export/codes/?format=json
    R Package

    # Download here

    library(ConceptLibraryClient)


    # Connect to API

    client = ConceptLibraryClient::Connection$new(public=TRUE)


    # Get codelist of Phenotype

    phenotype_codelist = client$phenotypes$get_codelist(
     'PH3801',
     version_id=8954
    )

    Py Package

    # Download here

    from pyconceptlibraryclient import Client


    # Connect to API

    client = Client(public=True)


    # Get codelist of Phenotype

    phenotype_codelist = client.phenotypes.get_codelist(
     'PH3801',
     version_id=8954
    )

  7. Version History

    Version IDNameOwnerPublish date
    Vitamin D Deficiency ieuan.scanlon2026-01-26 23:35