Phenotype Library | phenotype: Hyperplasia of prostate

Hyperplasia of prostate

Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A

PH39

Version ID

Type

Disease or Syndrome

Data Sources

CPRD GOLD , HES Admitted Patient Care data for CPRD GOLD

Valid event data range

01/01/1999 - 01/07/2016

Sex

♀ Female ♂ Male

Agreement Date

2019-05-20

Coding system

Read codes v2 ICD10 codes Med codes

Collections

CALIBER Phenotype Library

Definition

At the specified date, a patient is defined as having had Hyperplasia of prostate IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:

Primary care

Hyperplasia of prostate diagnosis or history of diagnosis during a consultation

OR Secondary care

ALL diagnoses of Hyperplasia of prostate or history of diagnosis during a hospitalization

Implementation

PhenoFlow Implementation:

https://kclhi.org/phenoflow/phenotype/download/133

Publications

Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3

Clinical Code List

CSV

JSON

XML

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C796/2731 Hyperplasia of prostate - Primary care - Read codes v2

Rows: 10

Code	Description	Disease	Medcode	Category
14E1.00	H/O: prostatism	Hyperplasia of prostate	16100.0	History of Hyperplasia of prostate
1AA..00	Prostatism	Hyperplasia of prostate	5906.0	Diagnosis of Hyperplasia of prostate
K20..00	Benign prostatic hypertrophy	Hyperplasia of prostate	3045.0	Diagnosis of Hyperplasia of prostate
K20..14	Enlarged prostate - benign	Hyperplasia of prostate	7702.0	Diagnosis of Hyperplasia of prostate
K20..15	BPH - benign prostatic hypertrophy	Hyperplasia of prostate	7555.0	Diagnosis of Hyperplasia of prostate
K20..16	Prostatism	Hyperplasia of prostate	2627.0	Diagnosis of Hyperplasia of prostate
K200.00	Prostatic hyperplasia unspecified	Hyperplasia of prostate	929.0	Diagnosis of Hyperplasia of prostate
K201.00	Prostatic hyperplasia of the lateral lobe	Hyperplasia of prostate	64296.0	Diagnosis of Hyperplasia of prostate
K202.00	Prostatic hyperplasia of the medial lobe	Hyperplasia of prostate	35676.0	Diagnosis of Hyperplasia of prostate
K20z.00	Prostatic hyperplasia NOS	Hyperplasia of prostate	16035.0	Diagnosis of Hyperplasia of prostate

C797/2733 Hyperplasia of prostate - Primary care - Med codes

Rows: 10

Code	Description	Disease	ReadcodeDescr	Readcode
16035.0	Diagnosis of Hyperplasia of prostate	Hyperplasia of prostate	Prostatic hyperplasia NOS	K20z.00
16100.0	History of Hyperplasia of prostate	Hyperplasia of prostate	H/O: prostatism	14E1.00
2627.0	Diagnosis of Hyperplasia of prostate	Hyperplasia of prostate	Prostatism	K20..16
3045.0	Diagnosis of Hyperplasia of prostate	Hyperplasia of prostate	Benign prostatic hypertrophy	K20..00
35676.0	Diagnosis of Hyperplasia of prostate	Hyperplasia of prostate	Prostatic hyperplasia of the medial lobe	K202.00
5906.0	Diagnosis of Hyperplasia of prostate	Hyperplasia of prostate	Prostatism	1AA..00
64296.0	Diagnosis of Hyperplasia of prostate	Hyperplasia of prostate	Prostatic hyperplasia of the lateral lobe	K201.00
7555.0	Diagnosis of Hyperplasia of prostate	Hyperplasia of prostate	BPH - benign prostatic hypertrophy	K20..15
7702.0	Diagnosis of Hyperplasia of prostate	Hyperplasia of prostate	Enlarged prostate - benign	K20..14
929.0	Diagnosis of Hyperplasia of prostate	Hyperplasia of prostate	Prostatic hyperplasia unspecified	K200.00

C798/2735 Hyperplasia of prostate - Secondary care - Diagnoses - ICD10 codes

Rows: 1

Code	Description	Disease	Category
N40	Hyperplasia of prostate	Hyperplasia of prostate	Diagnosis of Hyperplasia of prostate

API

To Export Phenotype Details:

Format	API
XML	site_root/api/v1/public/phenotypes/PH39/version/78/detail/?format=xml
JSON	site_root/api/v1/public/phenotypes/PH39/version/78/detail/?format=json
R Package	`# Download here library(ConceptLibraryClient) # Connect to API client = connect_to_API(public=TRUE) # Get details of phenotype details = get_phenotype_detail_by_version('PH39', '78', api_client=client)`

To Export Phenotype Code List:

Format	API
XML	site_root/api/v1/public/phenotypes/PH39/version/78/export/codes/?format=xml
JSON	site_root/api/v1/public/phenotypes/PH39/version/78/export/codes/?format=json
CSV	site_root/phenotypes/PH39/version/78/export/codes/
R Package	`# Download here library(ConceptLibraryClient) # Connect to API client = connect_to_API(public=TRUE) # Get codelists of phenotype codelists = get_phenotype_code_list('PH39', '78', api_client=client)`

Version History

Version ID	Name	Owner	Publish date
78	Hyperplasia of prostate	ieuan.scanlon	2021-10-06	currently shown