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Chronic Obstructive Pulmonary Disease (COPD)

Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A

Type
Disease or Syndrome
ID
PH43
Version ID
86
Valid event data range
01/01/1999 - 01/07/2016
Sex
Female, Male
Agreement Date
2019-05-20
Coding system
Read codes v2 ICD10 codes Med codes
Tags /Collections
CALIBER Phenotype Library

Definition

At the specified date, a patient is defined as having had COPD IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:

Primary care

  1. COPD diagnosis or history of diagnosis during a consultation

OR Secondary care (ICD10)

  1. ALL diagnoses of COPD or history of diagnosis during a hospitalization

Publications

  • Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3

Clinical Code List

Rows: 55
Code Description Disease Medcode Category
14B3.12 History of chronic obstructive pulmonary disease COPD 103494.0 History of COPD
H3...00 Chronic obstructive pulmonary disease COPD 1001.0 Diagnosis of COPD
H3...11 Chronic obstructive airways disease COPD 998.0 Diagnosis of COPD
H31..00 Chronic bronchitis COPD 3243.0 Diagnosis of COPD
H310.00 Simple chronic bronchitis COPD 25603.0 Diagnosis of COPD
H310000 Chronic catarrhal bronchitis COPD 15626.0 Diagnosis of COPD
H310z00 Simple chronic bronchitis NOS COPD 61118.0 Diagnosis of COPD
H311.00 Mucopurulent chronic bronchitis COPD 11150.0 Diagnosis of COPD
H311000 Purulent chronic bronchitis COPD 40159.0 Diagnosis of COPD
H311100 Fetid chronic bronchitis COPD 37959.0 Diagnosis of COPD
H311z00 Mucopurulent chronic bronchitis NOS COPD 61513.0 Diagnosis of COPD
H312.00 Obstructive chronic bronchitis COPD 27819.0 Diagnosis of COPD
H312000 Chronic asthmatic bronchitis COPD 5798.0 Diagnosis of COPD
H312011 Chronic wheezy bronchitis COPD 5909.0 Diagnosis of COPD
H312100 Emphysematous bronchitis COPD 14798.0 Diagnosis of COPD
H312200 Acute exacerbation of chronic obstructive airways disease COPD 1446.0 Diagnosis of COPD
H312300 Bronchiolitis obliterans COPD 26125.0 Diagnosis of COPD
H312z00 Obstructive chronic bronchitis NOS COPD 44525.0 Diagnosis of COPD
H313.00 Mixed simple and mucopurulent chronic bronchitis COPD 24248.0 Diagnosis of COPD
H31y.00 Other chronic bronchitis COPD 66043.0 Diagnosis of COPD
H31y100 Chronic tracheobronchitis COPD 45089.0 Diagnosis of COPD
H31yz00 Other chronic bronchitis NOS COPD 68066.0 Diagnosis of COPD
H31z.00 Chronic bronchitis NOS COPD 15157.0 Diagnosis of COPD
H32..00 Emphysema COPD 794.0 Diagnosis of COPD
H320.00 Chronic bullous emphysema COPD 26306.0 Diagnosis of COPD
H320000 Segmental bullous emphysema COPD 56860.0 Diagnosis of COPD
H320100 Zonal bullous emphysema COPD 68662.0 Diagnosis of COPD
H320200 Giant bullous emphysema COPD 60188.0 Diagnosis of COPD
H320300 Bullous emphysema with collapse COPD 99536.0 Diagnosis of COPD
H320z00 Chronic bullous emphysema NOS COPD 23492.0 Diagnosis of COPD
H321.00 Panlobular emphysema COPD 46578.0 Diagnosis of COPD
H322.00 Centrilobular emphysema COPD 10980.0 Diagnosis of COPD
H32y.00 Other emphysema COPD 40788.0 Diagnosis of COPD
H32y000 Acute vesicular emphysema COPD 92955.0 Diagnosis of COPD
H32y100 Atrophic (senile) emphysema COPD 70787.0 Diagnosis of COPD
H32y111 Acute interstitial emphysema COPD 59263.0 Diagnosis of COPD
H32y200 MacLeod's unilateral emphysema COPD 63479.0 Diagnosis of COPD
H32yz00 Other emphysema NOS COPD 16410.0 Diagnosis of COPD
H32z.00 Emphysema NOS COPD 33450.0 Diagnosis of COPD
H36..00 Mild chronic obstructive pulmonary disease COPD 10863.0 Diagnosis of COPD
H37..00 Moderate chronic obstructive pulmonary disease COPD 10802.0 Diagnosis of COPD
H38..00 Severe chronic obstructive pulmonary disease COPD 9876.0 Diagnosis of COPD
H39..00 Very severe chronic obstructive pulmonary disease COPD 93568.0 Diagnosis of COPD
H3A..00 End stage chronic obstructive airways disease COPD 104608.0 Diagnosis of COPD
H3y..00 Other specified chronic obstructive airways disease COPD 12166.0 Diagnosis of COPD
H3y..11 Other specified chronic obstructive pulmonary disease COPD 67040.0 Diagnosis of COPD
H3y0.00 Chronic obstruct pulmonary dis with acute lower resp infectn COPD 21061.0 Diagnosis of COPD
H3y1.00 Chron obstruct pulmonary dis wth acute exacerbation, unspec COPD 7884.0 Diagnosis of COPD
H3z..00 Chronic obstructive airways disease NOS COPD 5710.0 Diagnosis of COPD
H3z..11 Chronic obstructive pulmonary disease NOS COPD 37247.0 Diagnosis of COPD
H464000 Chronic emphysema due to chemical fumes COPD 64721.0 Diagnosis of COPD
H464100 Obliterative bronchiolitis due to chemical fumes COPD 63216.0 Diagnosis of COPD
H583200 Eosinophilic bronchitis COPD 106650.0 Diagnosis of COPD
Hyu3000 [X]Other emphysema COPD 66058.0 Diagnosis of COPD
Hyu3100 [X]Other specified chronic obstructive pulmonary disease COPD 65733.0 Diagnosis of COPD
Rows: 55
Code Description Disease ReadcodeDescr Readcode
1001.0 Diagnosis of COPD COPD Chronic obstructive pulmonary disease H3...00
103494.0 History of COPD COPD History of chronic obstructive pulmonary disease 14B3.12
104608.0 Diagnosis of COPD COPD End stage chronic obstructive airways disease H3A..00
106650.0 Diagnosis of COPD COPD Eosinophilic bronchitis H583200
10802.0 Diagnosis of COPD COPD Moderate chronic obstructive pulmonary disease H37..00
10863.0 Diagnosis of COPD COPD Mild chronic obstructive pulmonary disease H36..00
10980.0 Diagnosis of COPD COPD Centrilobular emphysema H322.00
11150.0 Diagnosis of COPD COPD Mucopurulent chronic bronchitis H311.00
12166.0 Diagnosis of COPD COPD Other specified chronic obstructive airways disease H3y..00
1446.0 Diagnosis of COPD COPD Acute exacerbation of chronic obstructive airways disease H312200
14798.0 Diagnosis of COPD COPD Emphysematous bronchitis H312100
15157.0 Diagnosis of COPD COPD Chronic bronchitis NOS H31z.00
15626.0 Diagnosis of COPD COPD Chronic catarrhal bronchitis H310000
16410.0 Diagnosis of COPD COPD Other emphysema NOS H32yz00
21061.0 Diagnosis of COPD COPD Chronic obstruct pulmonary dis with acute lower resp infectn H3y0.00
23492.0 Diagnosis of COPD COPD Chronic bullous emphysema NOS H320z00
24248.0 Diagnosis of COPD COPD Mixed simple and mucopurulent chronic bronchitis H313.00
25603.0 Diagnosis of COPD COPD Simple chronic bronchitis H310.00
26125.0 Diagnosis of COPD COPD Bronchiolitis obliterans H312300
26306.0 Diagnosis of COPD COPD Chronic bullous emphysema H320.00
27819.0 Diagnosis of COPD COPD Obstructive chronic bronchitis H312.00
3243.0 Diagnosis of COPD COPD Chronic bronchitis H31..00
33450.0 Diagnosis of COPD COPD Emphysema NOS H32z.00
37247.0 Diagnosis of COPD COPD Chronic obstructive pulmonary disease NOS H3z..11
37959.0 Diagnosis of COPD COPD Fetid chronic bronchitis H311100
40159.0 Diagnosis of COPD COPD Purulent chronic bronchitis H311000
40788.0 Diagnosis of COPD COPD Other emphysema H32y.00
44525.0 Diagnosis of COPD COPD Obstructive chronic bronchitis NOS H312z00
45089.0 Diagnosis of COPD COPD Chronic tracheobronchitis H31y100
46578.0 Diagnosis of COPD COPD Panlobular emphysema H321.00
56860.0 Diagnosis of COPD COPD Segmental bullous emphysema H320000
5710.0 Diagnosis of COPD COPD Chronic obstructive airways disease NOS H3z..00
5798.0 Diagnosis of COPD COPD Chronic asthmatic bronchitis H312000
5909.0 Diagnosis of COPD COPD Chronic wheezy bronchitis H312011
59263.0 Diagnosis of COPD COPD Acute interstitial emphysema H32y111
60188.0 Diagnosis of COPD COPD Giant bullous emphysema H320200
61118.0 Diagnosis of COPD COPD Simple chronic bronchitis NOS H310z00
61513.0 Diagnosis of COPD COPD Mucopurulent chronic bronchitis NOS H311z00
63216.0 Diagnosis of COPD COPD Obliterative bronchiolitis due to chemical fumes H464100
63479.0 Diagnosis of COPD COPD MacLeod's unilateral emphysema H32y200
64721.0 Diagnosis of COPD COPD Chronic emphysema due to chemical fumes H464000
65733.0 Diagnosis of COPD COPD [X]Other specified chronic obstructive pulmonary disease Hyu3100
66043.0 Diagnosis of COPD COPD Other chronic bronchitis H31y.00
66058.0 Diagnosis of COPD COPD [X]Other emphysema Hyu3000
67040.0 Diagnosis of COPD COPD Other specified chronic obstructive pulmonary disease H3y..11
68066.0 Diagnosis of COPD COPD Other chronic bronchitis NOS H31yz00
68662.0 Diagnosis of COPD COPD Zonal bullous emphysema H320100
70787.0 Diagnosis of COPD COPD Atrophic (senile) emphysema H32y100
7884.0 Diagnosis of COPD COPD Chron obstruct pulmonary dis wth acute exacerbation, unspec H3y1.00
794.0 Diagnosis of COPD COPD Emphysema H32..00
92955.0 Diagnosis of COPD COPD Acute vesicular emphysema H32y000
93568.0 Diagnosis of COPD COPD Very severe chronic obstructive pulmonary disease H39..00
9876.0 Diagnosis of COPD COPD Severe chronic obstructive pulmonary disease H38..00
99536.0 Diagnosis of COPD COPD Bullous emphysema with collapse H320300
998.0 Diagnosis of COPD COPD Chronic obstructive airways disease H3...11
Rows: 5
Code Description Disease Category
J40 Bronchitis, not specified as acute or chronic COPD Diagnosis of COPD
J41 Simple and mucopurulent chronic bronchitis COPD Diagnosis of COPD
J42 Unspecified chronic bronchitis COPD Diagnosis of COPD
J43 Emphysema COPD Diagnosis of COPD
J44 Other chronic obstructive pulmonary disease COPD Diagnosis of COPD

API

To Export Phenotype Details:

Format API
XML site_root/api/v1/public/phenotypes/PH43/version/86/detail/?format=xml
JSON site_root/api/v1/public/phenotypes/PH43/version/86/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of phenotype

details = get_phenotype_detail_by_version('PH43', '86', api_client=client)

To Export Phenotype Code List:

Format API
XML site_root/api/v1/public/phenotypes/PH43/version/86/export/codes/?format=xml
JSON site_root/api/v1/public/phenotypes/PH43/version/86/export/codes/?format=json
CSV site_root/phenotypes/PH43/version/86/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelists of phenotype

codelists = get_phenotype_code_list('PH43', '86', api_client=client)

Version History

Version
ID
Name Owner Publish date
86 Chronic Obstructive Pulmonary Disease (COPD) ieuan.scanlon 2021-10-06 currently shown

Export - export all codes into a csv file/JSON/XML for the current phenotype version.

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