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Smoking Status

Tim Doran, Evangelos Kontopantelis, Jose M Valderas, Stephen Campbell, Martin Roland, Chris Salisbury, David Reeves

Type
Lifestyle Risk Factor
ID
PH436
Version ID
872
Data Sources
Valid event data range
01/01/2000 - 31/12/2007
Sex
Female, Male
Agreement Date
2011-06-28
Coding system
Read codes v2 OXMIS codes
Tags /Collections
ClinicalCodes Repository Phenotype Library

Definition

Patient level data were extracted from the General Practice Research Database (GPRD), which contains anonymised, patient based data on morbidity, prescribing, treatment, and referral collected from over 500 general practices, covering about 7% of the UK population (4.4 million patients).14 Data are in Read code format—a hierarchical system used to code clinical data. Additional data on prescriptions and test results are available as free-text entries. We selected a sample of 148 practices that provided data to the GPRD continuously between January 2000 and December 2007, structured to include a range of list (patient panel) sizes. Selected practices were nationally representative in terms of patient sex and age distribution and area socioeconomic deprivation but had a relatively large average list size, reflecting a bias towards larger practices in the GPRD. Overall, the selected practices performed marginally better than national practices on the clinical indicators in the Quality and Outcomes Framework. A random selection of 4500 patients registered for at least one day between 1 January 2000 and 31 December 2007 was drawn from each practice. For practices with fewer than 4501 patients, all patients were selected. The final sample consisted of 653 500 patients. Patients with relevant conditions were identified from their diagnostic Read codes. Patients for whom targets were met were identified from the relevant Read codes and free-text terms.

Publications

  • Tim Doran, Evangelos Kontopantelis, Jose M Valderas, Stephen Campbell, Martin Roland, Chris Salisbury, David Reeves, Effect of financial incentives on incentivised and non-incentivised clinical activities: longitudinal analysis of data from the UK Quality and Outcomes Framework. BMJ, 342:d3590, 2011.

Clinical Code List

Rows: 89
Code Description Entity type Coding System (OXMIS Read) Category
137..00 Tobacco consumption smoking_status Read observation
137..11 Smoker - amount smoked smoking_status Read observation
1371.00 Never smoked tobacco smoking_status Read observation
1371.11 Non-smoker smoking_status Read observation
1372.00 Trivial smoker - < 1 cig/day smoking_status Read observation
1372.11 Occasional smoker smoking_status Read observation
1373.00 Light smoker - 1-9 cigs/day smoking_status Read observation
1374.00 Moderate smoker - 10-19 cigs/d smoking_status Read observation
1375.00 Heavy smoker - 20-39 cigs/day smoking_status Read observation
1376.00 Very heavy smoker - 40+cigs/d smoking_status Read observation
1377.00 Ex-trivial smoker (<1/day) smoking_status Read observation
1378.00 Ex-light smoker (1-9/day) smoking_status Read observation
1379.00 Ex-moderate smoker (10-19/day) smoking_status Read observation
137A.00 Ex-heavy smoker (20-39/day) smoking_status Read observation
137B.00 Ex-very heavy smoker (40+/day) smoking_status Read observation
137C.00 Keeps trying to stop smoking smoking_status Read observation
137D.00 Admitted tobacco cons untrue ? smoking_status Read observation
137F.00 Ex-smoker - amount unknown smoking_status Read observation
137G.00 Trying to give up smoking smoking_status Read observation
137H.00 Pipe smoker smoking_status Read observation
137J.00 Cigar smoker smoking_status Read observation
137K.00 Stopped smoking smoking_status Read observation
137L.0 smoking_status Read observation
137L.00 Current non-smoker smoking_status Read observation
137M.00 Rolls own cigarettes smoking_status Read observation
137N.00 Ex pipe smoker smoking_status Read observation
137O.00 Ex cigar smoker smoking_status Read observation
137P.00 Cigarette smoker smoking_status Read observation
137P.11 Smoker smoking_status Read observation
137Q.00 Smoking started smoking_status Read observation
137Q.11 Smoking restarted smoking_status Read observation
137R.00 Current smoker smoking_status Read observation
137S.00 Ex smoker smoking_status Read observation
137T.00 Date ceased smoking smoking_status Read observation
137U.00 Not a passive smoker smoking_status Read observation
137V.00 Smoking reduced smoking_status Read observation
137X.00 Cigarette consumption smoking_status Read observation
137Y.00 Cigar consumption smoking_status Read observation
137Z.00 Tobacco consumption NOS smoking_status Read observation
137a.00 Pipe tobacco consumption smoking_status Read observation
137b.00 Ready to stop smoking smoking_status Read observation
137c.00 Thinking about stopping smoking smoking_status Read observation
137d.00 Not interested in stopping smoking smoking_status Read observation
137e.00 Smoking restarted smoking_status Read observation
137f.00 Reason for restarting smoking smoking_status Read observation
137g.00 Cigarette pack-years smoking_status Read observation
137h.00 Minutes from waking to first tobacco consumption smoking_status Read observation
13p..00 Smoking cessation milestones smoking_status Read observation
13p0.00 Negotiated date for cessation of smoking smoking_status Read observation
13p1.00 Smoking status at 4 weeks smoking_status Read observation
13p2.00 Smoking status between 4 and 52 weeks smoking_status Read observation
13p3.00 Smoking status at 52 weeks smoking_status Read observation
13p4.00 Smoking free weeks smoking_status Read observation
13p5.00 Smoking cessation programme start date smoking_status Read observation
6791.00 Health ed. - smoking smoking_status Read observation
67A3.00 Pregnancy smoking advice smoking_status Read observation
67H1.00 Lifestyle advice regarding smoking smoking_status Read observation
745H.00 Smoking cessation therapy smoking_status Read observation
745H000 Nicotine replacement therapy using nicotine patches smoking_status Read observation
745H100 Nicotine replacement therapy using nicotine gum smoking_status Read observation
745H200 Nicotine replacement therapy using nicotine inhalator smoking_status Read observation
745H300 Nicotine replacement therapy using nicotine lozenges smoking_status Read observation
8B2B.00 Nicotine replacement therapy smoking_status Read observation
8B3Y.00 Over the counter nicotine replacement therapy smoking_status Read observation
8B3f.00 Nicotine replacement therapy provided free smoking_status Read observation
8BP3.00 Nicotine replacement therapy provided by community pharmacis smoking_status Read observation
8CAL.00 Smoking cessation advice smoking_status Read observation
8CAg.00 Smoking cessation advice provided by community pharmacist smoking_status Read observation
8H7i.00 Referral to smoking cessation advisor smoking_status Read observation
8HTK.00 Referral to stop-smoking clinic smoking_status Read observation
9N2k.00 Seen by smoking cessation advisor smoking_status Read observation
9N4M.00 DNA - Did not attend smoking cessation clinic smoking_status Read observation
9OO..00 Anti-smoking monitoring admin. smoking_status Read observation
9OO..11 Stop smoking clinic admin. smoking_status Read observation
9OO..12 Stop smoking monitoring admin. smoking_status Read observation
9OO1.00 Attends stop smoking monitor. smoking_status Read observation
9OO2.00 Refuses stop smoking monitor smoking_status Read observation
9OO3.00 Stop smoking monitor default smoking_status Read observation
9OO4.00 Stop smoking monitor 1st lettr smoking_status Read observation
9OO5.00 Stop smoking monitor 2nd lettr smoking_status Read observation
9OO6.00 Stop smoking monitor 3rd lettr smoking_status Read observation
9OO7.00 Stop smoking monitor verb.inv. smoking_status Read observation
9OO8.00 Stop smoking monitor phone inv smoking_status Read observation
9OO9.00 Stop smoking monitoring delete smoking_status Read observation
9OOA.00 Stop smoking monitor.chck done smoking_status Read observation
ZG23300 Advice on smoking smoking_status Read observation
ZRaM.00 Motives for smoking scale smoking_status Read observation
ZRh4.00 Reasons for smoking scale smoking_status Read observation
ZRh4.11 RFS - Reasons for smoking scale smoking_status Read observation
Rows: 32
Code Description Entity type Coding System (OXMIS Read) Category
L5091S SMOKING STARTED smoking_status OXMIS observation
T509 SMOKER smoking_status OXMIS observation
T509 SR SMOKING RESTARTED smoking_status OXMIS observation
T5090OR SMOKER OWN ROLLED smoking_status OXMIS observation
T5090XC SMOKER CIGARETTES smoking_status OXMIS observation
T5091 STOPPED SMOKING smoking_status OXMIS observation
T5091ES FORMER SMOKER smoking_status OXMIS observation
T5091HS EX HEAVY SMOKER smoking_status OXMIS observation
T5092 SMOKING ADVISED TO STOP smoking_status OXMIS observation
T5092S SMOKING WISHES TO STOP smoking_status OXMIS observation
T5092SA SMOKING WANTS TO STOP smoking_status OXMIS observation
T5093 SMOKER NON smoking_status OXMIS observation
T5093N SMOKED NEVER smoking_status OXMIS observation
T510 EXCESSIVE SMOKING smoking_status OXMIS observation
T510 HS HEAVY SMOKER (20-PLUS PER DAY) smoking_status OXMIS observation
T510 SE SMOKING EXCESSIVE smoking_status OXMIS observation
T510 SH SMOKER HEAVY (20-PLUS PER DAY) smoking_status OXMIS observation
T511 SMOKER MODERATE (LESS THAN 20 PER DAY) smoking_status OXMIS observation
T5112 SMOKER (20 PER DAY) smoking_status OXMIS observation
T5113 SMOKER (15 PER DAY) smoking_status OXMIS observation
T5114 SMOKER (10 PER DAY) smoking_status OXMIS observation
T5115 SMOKER (LESS THAN 10 PER DAY) smoking_status OXMIS observation
T5115M SMOKER MILD (5 OR LESS PER DAY) smoking_status OXMIS observation
T5116 SMOKER(OCCASIONAL) smoking_status OXMIS observation
T5117 SMOKER (30 PER DAY) smoking_status OXMIS observation
T512 SMOKER PIPE smoking_status OXMIS observation
T513 SMOKER CIGARS smoking_status OXMIS observation
Y060 J1 STOP SMOKING GROUP smoking_status OXMIS observation
Y060 JJ CLINIC ANTI-SMOKING smoking_status OXMIS observation
Y060 KA SMOKING CLINIC smoking_status OXMIS observation
Y0601JJ CLINIC ANTI-SMOKING ATTENDANCE smoking_status OXMIS observation
Y0601KA SMOKING CLINIC ATTENDANCE smoking_status OXMIS observation

API

To Export Phenotype Details:

Format API
XML site_root/api/v1/public/phenotypes/PH436/version/872/detail/?format=xml
JSON site_root/api/v1/public/phenotypes/PH436/version/872/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of phenotype

details = get_phenotype_detail_by_version('PH436', '872', api_client=client)

To Export Phenotype Code List:

Format API
XML site_root/api/v1/public/phenotypes/PH436/version/872/export/codes/?format=xml
JSON site_root/api/v1/public/phenotypes/PH436/version/872/export/codes/?format=json
CSV site_root/phenotypes/PH436/version/872/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelists of phenotype

codelists = get_phenotype_code_list('PH436', '872', api_client=client)

Version History

Version
ID
Name Owner Publish date
872 Smoking Status ieuan.scanlon 2021-10-06 currently shown

Export - export all codes into a csv file/JSON/XML for the current phenotype version.

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