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Alcohol Status

Caroline Fairhurst, Ian Watt, Fabiola Martin, Martin Bland, William J Brackenbury

Type
Lifestyle Risk Factor
ID
PH447
Version ID
894
Data Sources
Valid event data range
01/01/1998 - 31/12/2013
Sex
Female, Male
Agreement Date
2014-11-14
Coding system
Read codes v2
Tags /Collections
ClinicalCodes Repository Phenotype Library

Definition

A cohort study based on primary care data from the QResearch database will include patients with one of the three common tumours: breast, bowel and prostate. The primary outcome will be overall survival from the date of cancer diagnosis. Cox proportional hazards regression will be used to compare the survival of patients with cancer taking VGSC-inhibiting drugs (including anticonvulsants and class I antiarrhythmic agents) with patients with cancer not exposed to these drugs, adjusting for age and sex. Exposure to VGSC-inhibiting drugs will be defined as having at least one prescription for these drugs prior to cancer diagnosis. High and low exposure groups will be identified based on the length of use. A number of sensitivity and secondary analyses will be conducted.

Publications

  • Caroline Fairhurst, Ian Watt, Fabiola Martin, Martin Bland, William J Brackenburry, Exposure to sodium channel-inhibiting drugs and cancer survival protocol for a cohort study using the QResearch primary care database. BMJ Open, 4:e006604 2014.

Clinical Code List

Rows: 59
Code Description Entity type Category Coding System (Read)
136 Alcohol consumption res17: Alcohol status test Read
1361 Teetotaller res17: Alcohol status test Read
1361-1 Non drinker alcohol res17: Alcohol status test Read
1361-2 Non-drinker alcohol res17: Alcohol status test Read
1362 Trivial drinker - <1u/day res17: Alcohol status test Read
1362-1 Drinks rarely res17: Alcohol status test Read
1362-2 Drinks occasionally res17: Alcohol status test Read
1363 Light drinker - 1-2u/day res17: Alcohol status test Read
1364 Moderate drinker - 3-6u/day res17: Alcohol status test Read
1365 Heavy drinker - 7-9u/day res17: Alcohol status test Read
1366 Very heavy drinker - >9u/day res17: Alcohol status test Read
1367 Stopped drinking alcohol res17: Alcohol status test Read
1368 Alcohol consumption unknown res17: Alcohol status test Read
1369 Suspect alcohol abuse - denied res17: Alcohol status test Read
136A Ex-trivial drinker (<1u/day) res17: Alcohol status test Read
136B Ex-light drinker - (1-2u/day) res17: Alcohol status test Read
136C Ex-moderate drinker - (3-6u/d) res17: Alcohol status test Read
136D Ex-heavy drinker - (7-9u/day) res17: Alcohol status test Read
136E Ex-very heavy drinker-(>9u/d) res17: Alcohol status test Read
136F Spirit drinker res17: Alcohol status test Read
136G Beer drinker res17: Alcohol status test Read
136H Drinks beer and spirits res17: Alcohol status test Read
136I Drinks wine res17: Alcohol status test Read
136J Social drinker res17: Alcohol status test Read
136K Alcohol intake above recommended sensible limits res17: Alcohol status test Read
136L Alcohol intake within recommended sensible limits res17: Alcohol status test Read
136M Current non drinker res17: Alcohol status test Read
136N Light drinker res17: Alcohol status test Read
136O Moderate drinker res17: Alcohol status test Read
136P Heavy drinker res17: Alcohol status test Read
136Q Very heavy drinker res17: Alcohol status test Read
136R Binge drinker res17: Alcohol status test Read
136S Hazardous alcohol use res17: Alcohol status test Read
136T Harmful alcohol use res17: Alcohol status test Read
136V Alcohol units per week res17: Alcohol status test Read
136X Alcohol units consumed on heaviest drinking day res17: Alcohol status test Read
136Y Drinks in morning to get rid of hangover res17: Alcohol status test Read
136Z Alcohol consumption NOS res17: Alcohol status test Read
136a Increasing risk drinking res17: Alcohol status test Read
136b Feels should cut down drinking res17: Alcohol status test Read
136c Higher risk drinking res17: Alcohol status test Read
136d Lower risk drinking res17: Alcohol status test Read
136e Declines to state current alcohol consumption res17: Alcohol status test Read
E23-2 Alcohol problem drinking res17: Alcohol status test Read
EGTON418 Alcohol intake res17: Alcohol status test Read
EGTONGR6 Grade A none drinker or rare res17: Alcohol status test Read
EGTONGR7 Grade B 0-20 units/week res17: Alcohol status test Read
EGTONGR8 Grade C 21-49 units/week res17: Alcohol status test Read
EGTONGR9 Grade D 50 or more units/week res17: Alcohol status test Read
EMISNQUN23 Unsuccessful attempts to reduce alcohol consumption res17: Alcohol status test Read
EMISQAL1 Alcohol AUDIT score res17: Alcohol status test Read
EMISQAL2 Alcohol reduction-maintain abstinence res17: Alcohol status test Read
EMISQAU1 AUDIT score <4 no drinking problem res17: Alcohol status test Read
EMISQAU2 AUDIT score >5 alcohol dependence syndrome res17: Alcohol status test Read
EMISQAU3 AUDIT score >5 alcohol problem drinker res17: Alcohol status test Read
EMISQNO6 Not interested in reducing alcohol res17: Alcohol status test Read
EMISQOT3 Other alcohol related information res17: Alcohol status test Read
EMISQRE13 Ready to start reducing alcohol res17: Alcohol status test Read
EMISQTH4 Thinking about reducing alcohol res17: Alcohol status test Read

API

To Export Phenotype Details:

Format API
XML site_root/api/v1/public/phenotypes/PH447/version/894/detail/?format=xml
JSON site_root/api/v1/public/phenotypes/PH447/version/894/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of phenotype

details = get_phenotype_detail_by_version('PH447', '894', api_client=client)

To Export Phenotype Code List:

Format API
XML site_root/api/v1/public/phenotypes/PH447/version/894/export/codes/?format=xml
JSON site_root/api/v1/public/phenotypes/PH447/version/894/export/codes/?format=json
CSV site_root/phenotypes/PH447/version/894/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelists of phenotype

codelists = get_phenotype_code_list('PH447', '894', api_client=client)

Version History

Version
ID
Name Owner Publish date
894 Alcohol Status ieuan.scanlon 2021-10-06 currently shown

Export - export all codes into a csv file/JSON/XML for the current phenotype version.

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