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Ethnicity

Caroline Fairhurst, Ian Watt, Fabiola Martin, Martin Bland, William J Brackenbury

Type
Disease or Syndrome
ID
PH457
Version ID
914
Data Sources
QResearch
Valid event data range
01/01/1998 - 31/12/2013
Sex
Female, Male
Agreement Date
2014-11-14
Coding system
Read codes v2
Tags /Collections
ClinicalCodes Repository Phenotype Library

Definition

A cohort study based on primary care data from the QResearch database will include patients with one of the three common tumours: breast, bowel and prostate. The primary outcome will be overall survival from the date of cancer diagnosis. Cox proportional hazards regression will be used to compare the survival of patients with cancer taking VGSC-inhibiting drugs (including anticonvulsants and class I antiarrhythmic agents) with patients with cancer not exposed to these drugs, adjusting for age and sex. Exposure to VGSC-inhibiting drugs will be defined as having at least one prescription for these drugs prior to cancer diagnosis. High and low exposure groups will be identified based on the length of use. A number of sensitivity and secondary analyses will be conducted.

Publications

  • Caroline Fairhurst, Ian Watt, Fabiola Martin, Martin Bland, William J Brackenburry, Exposure to sodium channel-inhibiting drugs and cancer survival protocol for a cohort study using the QResearch primary care database. BMJ Open, 4:e006604 2014.

Clinical Code List

Rows: 130
Code Description Entity type Category Coding System (Read)
226 O/E - ethnic group res17: Ethnicity test Read
226-1 O/E - ethnic origin res17: Ethnicity test Read
226Z O/E - ethnic group NOS res17: Ethnicity test Read
916E Patient ethnicity unknown res17: Ethnicity test Read
918t Carer from Black and minority ethnic group res17: Ethnicity test Read
9S Ethnic groups (census) res17: Ethnicity test Read
9S12 Other white ethnic group res17: Ethnicity test Read
9S14 Other white British ethnic group res17: Ethnicity test Read
9SA Other ethnic non-mixed (NMO) res17: Ethnicity test Read
9SA1 Brit. ethnic minor. spec.(NMO) res17: Ethnicity test Read
9SA2 Brit. ethnic minor. unsp (NMO) res17: Ethnicity test Read
9SAD Other ethnic NEC (NMO) res17: Ethnicity test Read
9SD Ethnic group not given - patient refused res17: Ethnicity test Read
9SE Ethnic group not recorded res17: Ethnicity test Read
9SG Other black ethnic group res17: Ethnicity test Read
9SH Other Asian ethnic group res17: Ethnicity test Read
9SJ Other ethnic group res17: Ethnicity test Read
9SZ Ethnic groups (census) NOS res17: Ethnicity test Read
9T Ethnicity and other related nationality data res17: Ethnicity test Read
9T1 New Zealand ethnic groups res17: Ethnicity test Read
9T11 New Zealand European res17: Ethnicity test Read
9T11-1 Pakeha res17: Ethnicity test Read
9T12 Other European in New Zealand res17: Ethnicity test Read
9T13 New Zealand Maori res17: Ethnicity test Read
9T14 Samoan res17: Ethnicity test Read
9T15 Cook Island Maori res17: Ethnicity test Read
9T16 Tongan res17: Ethnicity test Read
9T17 Niuean res17: Ethnicity test Read
9T18 Tokelauan res17: Ethnicity test Read
9T19 Fijian res17: Ethnicity test Read
9T1A Other Pacific ethnic group res17: Ethnicity test Read
9T1B South East Asian res17: Ethnicity test Read
9T1C Chinese res17: Ethnicity test Read
9T1D Indian res17: Ethnicity test Read
9T1E Other Asian res17: Ethnicity test Read
9T1Y Other New Zealand ethnic group res17: Ethnicity test Read
9T1Z New Zealand ethnic group NOS res17: Ethnicity test Read
9T2 Traveller - gypsy res17: Ethnicity test Read
9T3 Yemeni res17: Ethnicity test Read
9T4 Romanian res17: Ethnicity test Read
9T5 Bulgarian res17: Ethnicity test Read
9T6 Czech res17: Ethnicity test Read
9T7 Slovak res17: Ethnicity test Read
9T8 Portuguese res17: Ethnicity test Read
9T9 Nepali res17: Ethnicity test Read
9i Ethnic category - 2001 census res17: Ethnicity test Read
9i0 British or mixed British - ethnic category 2001 census res17: Ethnicity test Read
9i00 White British - ethnic category 2001 census res17: Ethnicity test Read
9i1 Irish - ethnic category 2001 census res17: Ethnicity test Read
9i10 White Irish - ethnic category 2001 census res17: Ethnicity test Read
9i2 Other White background - ethnic category 2001 census res17: Ethnicity test Read
9i20 English - ethnic category 2001 census res17: Ethnicity test Read
9i21 Scottish - ethnic category 2001 census res17: Ethnicity test Read
9i22 Welsh - ethnic category 2001 census res17: Ethnicity test Read
9i23 Cornish - ethnic category 2001 census res17: Ethnicity test Read
9i24 Northern Irish - ethnic category 2001 census res17: Ethnicity test Read
9i25 Ulster Scots - ethnic category 2001 census res17: Ethnicity test Read
9i26 Cypriot (part not stated) - ethnic category 2001 census res17: Ethnicity test Read
9i27 Greek - ethnic category 2001 census res17: Ethnicity test Read
9i28 Greek Cypriot - ethnic category 2001 census res17: Ethnicity test Read
9i29 Turkish - ethnic category 2001 census res17: Ethnicity test Read
9i2A Turkish Cypriot - ethnic category 2001 census res17: Ethnicity test Read
9i2B Italian - ethnic category 2001 census res17: Ethnicity test Read
9i2C Irish Traveller - ethnic category 2001 census res17: Ethnicity test Read
9i2D Traveller - ethnic category 2001 census res17: Ethnicity test Read
9i2E Gypsy/Romany - ethnic category 2001 census res17: Ethnicity test Read
9i2F Polish - ethnic category 2001 census res17: Ethnicity test Read
9i2J Kosovan - ethnic category 2001 census res17: Ethnicity test Read
9i2K Albanian - ethnic category 2001 census res17: Ethnicity test Read
9i2L Bosnian - ethnic category 2001 census res17: Ethnicity test Read
9i2M Croatian - ethnic category 2001 census res17: Ethnicity test Read
9i2N Serbian - ethnic category 2001 census res17: Ethnicity test Read
9i2P Other republics former Yugoslavia - ethnic categ 2001 census res17: Ethnicity test Read
9i2Q Mixed Irish and other White - ethnic category 2001 census res17: Ethnicity test Read
9i2S Other mixed White - ethnic category 2001 census res17: Ethnicity test Read
9i2T Other White or White unspecified ethnic category 2001 census res17: Ethnicity test Read
9i3 White and Black Caribbean - ethnic category 2001 census res17: Ethnicity test Read
9i4 White and Black African - ethnic category 2001 census res17: Ethnicity test Read
9i5 White and Asian - ethnic category 2001 census res17: Ethnicity test Read
9i6 Other Mixed background - ethnic category 2001 census res17: Ethnicity test Read
9i60 Black and Asian - ethnic category 2001 census res17: Ethnicity test Read
9i61 Black and Chinese - ethnic category 2001 census res17: Ethnicity test Read
9i62 Black and White - ethnic category 2001 census res17: Ethnicity test Read
9i63 Chinese and White - ethnic category 2001 census res17: Ethnicity test Read
9i64 Asian and Chinese - ethnic category 2001 census res17: Ethnicity test Read
9i65 Other Mixed or Mixed unspecified ethnic category 2001 census res17: Ethnicity test Read
9i7 Indian or British Indian - ethnic category 2001 census res17: Ethnicity test Read
9i8 Pakistani or British Pakistani - ethnic category 2001 census res17: Ethnicity test Read
9iA Other Asian background - ethnic category 2001 census res17: Ethnicity test Read
9iA1 Punjabi - ethnic category 2001 census res17: Ethnicity test Read
9iA2 Kashmiri - ethnic category 2001 census res17: Ethnicity test Read
9iA3 East African Asian - ethnic category 2001 census res17: Ethnicity test Read
9iA4 Sri Lankan - ethnic category 2001 census res17: Ethnicity test Read
9iA5 Tamil - ethnic category 2001 census res17: Ethnicity test Read
9iA6 Sinhalese - ethnic category 2001 census res17: Ethnicity test Read
9iA7 Caribbean Asian - ethnic category 2001 census res17: Ethnicity test Read
9iA8 British Asian - ethnic category 2001 census res17: Ethnicity test Read
9iA9 Mixed Asian - ethnic category 2001 census res17: Ethnicity test Read
9iAA Other Asian or Asian unspecified ethnic category 2001 census res17: Ethnicity test Read
9iB Caribbean - ethnic category 2001 census res17: Ethnicity test Read
9iC African - ethnic category 2001 census res17: Ethnicity test Read
9iD Other Black background - ethnic category 2001 census res17: Ethnicity test Read
9iD0 Somali - ethnic category 2001 census res17: Ethnicity test Read
9iD1 Nigerian - ethnic category 2001 census res17: Ethnicity test Read
9iD2 Black British - ethnic category 2001 census res17: Ethnicity test Read
9iD3 Mixed Black - ethnic category 2001 census res17: Ethnicity test Read
9iD4 Other Black or Black unspecified ethnic category 2001 census res17: Ethnicity test Read
9iE Chinese - ethnic category 2001 census res17: Ethnicity test Read
9iF Other - ethnic category 2001 census res17: Ethnicity test Read
9iF0 Vietnamese - ethnic category 2001 census res17: Ethnicity test Read
9iF1 Japanese - ethnic category 2001 census res17: Ethnicity test Read
9iF2 Filipino - ethnic category 2001 census res17: Ethnicity test Read
9iF3 Malaysian - ethnic category 2001 census res17: Ethnicity test Read
9iF4 Buddhist - ethnic category 2001 census res17: Ethnicity test Read
9iF5 Hindu - ethnic category 2001 census res17: Ethnicity test Read
9iF6 Jewish - ethnic category 2001 census res17: Ethnicity test Read
9iF7 Muslim - ethnic category 2001 census res17: Ethnicity test Read
9iF8 Sikh - ethnic category 2001 census res17: Ethnicity test Read
9iF9 Arab - ethnic category 2001 census res17: Ethnicity test Read
9iFA North African - ethnic category 2001 census res17: Ethnicity test Read
9iFC Israeli - ethnic category 2001 census res17: Ethnicity test Read
9iFD Iranian - ethnic category 2001 census res17: Ethnicity test Read
9iFE Kurdish - ethnic category 2001 census res17: Ethnicity test Read
9iFF Moroccan - ethnic category 2001 census res17: Ethnicity test Read
9iFG Latin American - ethnic category 2001 census res17: Ethnicity test Read
9iFH South and Central American - ethnic category 2001 census res17: Ethnicity test Read
9iFK Any other group - ethnic category 2001 census res17: Ethnicity test Read
9iG Ethnic category not stated - 2001 census res17: Ethnicity test Read
EMISNQBR14 Brazilian res17: Ethnicity test Read
EMISNQPO8 Portuguese res17: Ethnicity test Read

API

To Export Phenotype Details:

Format API
XML site_root/api/v1/public/phenotypes/PH457/version/914/detail/?format=xml
JSON site_root/api/v1/public/phenotypes/PH457/version/914/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of phenotype

details = get_phenotype_detail_by_version('PH457', '914', api_client=client)

To Export Phenotype Code List:

Format API
XML site_root/api/v1/public/phenotypes/PH457/version/914/export/codes/?format=xml
JSON site_root/api/v1/public/phenotypes/PH457/version/914/export/codes/?format=json
CSV site_root/phenotypes/PH457/version/914/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelists of phenotype

codelists = get_phenotype_code_list('PH457', '914', api_client=client)

Version History

Version
ID
Name Owner Publish date
914 Ethnicity ieuan.scanlon 2021-10-06 currently shown

Export - export all codes into a csv file/JSON/XML for the current phenotype version.

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