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Gastro-oesophageal reflux disease

Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A

Type
Disease or Syndrome
ID
PH48
Version ID
96
Valid event data range
01/01/1999 - 01/07/2016
Sex
Female, Male
Agreement Date
2019-05-20
Coding system
Read codes v2 ICD10 codes OPCS4 codes Med codes
Tags /Collections
CALIBER Phenotype Library

Definition

At the specified date, a patient is defined as having had 'Gastro-oesophageal reflux disease' IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:

Primary care

  1. 'Gastro-oesophageal reflux disease' diagnosis or history of diagnosis or procedure during a consultation

OR Secondary care

  1. ALL diagnoses of 'Gastro-oesophageal reflux disease' or history of diagnosis during a hospitalization OR Secondary care (OPCS4)

  2. ALL procedures for 'Gastro-oesophageal reflux disease' during a hospitalization

Implementation


Publications

  • Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3

Clinical Code List

Rows: 24
Code Description Disease Medcode Category
171J.00 Reflux cough Gastro-oesophageal reflux disease 19470.0 Diagnosis of Gastro-oesophageal reflux disease
1957.00 Gastric reflux Gastro-oesophageal reflux disease 7577.0 Diagnosis of Gastro-oesophageal reflux disease
760L.00 Antireflux operations Gastro-oesophageal reflux disease 18211.0 Procedure for Gastro-oesophageal reflux disease
760L.11 Oesophageal reflux operations Gastro-oesophageal reflux disease 17263.0 Procedure for Gastro-oesophageal reflux disease
760L000 Antireflux fundoplication using thoracic approach Gastro-oesophageal reflux disease 14713.0 Procedure for Gastro-oesophageal reflux disease
760L100 Antireflux operation using thoracic approach NEC Gastro-oesophageal reflux disease 53657.0 Procedure for Gastro-oesophageal reflux disease
760L111 Antireflux procedure using thoracic approach NEC Gastro-oesophageal reflux disease 68276.0 Procedure for Gastro-oesophageal reflux disease
760L200 Antireflux fundoplication using abdominal approach Gastro-oesophageal reflux disease 17610.0 Procedure for Gastro-oesophageal reflux disease
760L300 Antireflux gastropexy Gastro-oesophageal reflux disease 45360.0 Procedure for Gastro-oesophageal reflux disease
760L311 Antireflux gastroplasty Gastro-oesophageal reflux disease 48146.0 Procedure for Gastro-oesophageal reflux disease
760L400 Antireflux procedure and gastroplasty HFQ Gastro-oesophageal reflux disease 103564.0 Procedure for Gastro-oesophageal reflux disease
760Ly00 Other specified antireflux operation Gastro-oesophageal reflux disease 34005.0 Procedure for Gastro-oesophageal reflux disease
760Lz00 Antireflux operation NOS Gastro-oesophageal reflux disease 28619.0 Procedure for Gastro-oesophageal reflux disease
760M.00 Revision of antireflux operations Gastro-oesophageal reflux disease 51400.0 Procedure for Gastro-oesophageal reflux disease
760Mz00 Revision of antireflux operation NOS Gastro-oesophageal reflux disease 67258.0 Procedure for Gastro-oesophageal reflux disease
J101100 Reflux oesophagitis Gastro-oesophageal reflux disease 2535.0 Diagnosis of Gastro-oesophageal reflux disease
J101111 Acid reflux Gastro-oesophageal reflux disease 15054.0 Diagnosis of Gastro-oesophageal reflux disease
J101112 Gastro-oesophageal reflux with oesophagitis Gastro-oesophageal reflux disease 7104.0 Diagnosis of Gastro-oesophageal reflux disease
J101113 Oesophageal reflux with oesophagitis Gastro-oesophageal reflux disease 16605.0 Diagnosis of Gastro-oesophageal reflux disease
J10y400 Oesopheal reflux without mention of oesophagitis Gastro-oesophageal reflux disease 25610.0 Diagnosis of Gastro-oesophageal reflux disease
J10y411 Oesophageal reflux Gastro-oesophageal reflux disease 1327.0 Diagnosis of Gastro-oesophageal reflux disease
J10y412 Gastro-oesophageal reflux Gastro-oesophageal reflux disease 984.0 Diagnosis of Gastro-oesophageal reflux disease
J10y413 Acid reflux Gastro-oesophageal reflux disease 2281.0 Diagnosis of Gastro-oesophageal reflux disease
J10y500 Laryngopharyngeal reflux Gastro-oesophageal reflux disease 19111.0 Diagnosis of Gastro-oesophageal reflux disease
Rows: 24
Code Description Disease ReadcodeDescr Readcode
103564.0 Procedure for Gastro-oesophageal reflux disease Gastro-oesophageal reflux disease Antireflux procedure and gastroplasty HFQ 760L400
1327.0 Diagnosis of Gastro-oesophageal reflux disease Gastro-oesophageal reflux disease Oesophageal reflux J10y411
14713.0 Procedure for Gastro-oesophageal reflux disease Gastro-oesophageal reflux disease Antireflux fundoplication using thoracic approach 760L000
15054.0 Diagnosis of Gastro-oesophageal reflux disease Gastro-oesophageal reflux disease Acid reflux J101111
16605.0 Diagnosis of Gastro-oesophageal reflux disease Gastro-oesophageal reflux disease Oesophageal reflux with oesophagitis J101113
17263.0 Procedure for Gastro-oesophageal reflux disease Gastro-oesophageal reflux disease Oesophageal reflux operations 760L.11
17610.0 Procedure for Gastro-oesophageal reflux disease Gastro-oesophageal reflux disease Antireflux fundoplication using abdominal approach 760L200
18211.0 Procedure for Gastro-oesophageal reflux disease Gastro-oesophageal reflux disease Antireflux operations 760L.00
19111.0 Diagnosis of Gastro-oesophageal reflux disease Gastro-oesophageal reflux disease Laryngopharyngeal reflux J10y500
19470.0 Diagnosis of Gastro-oesophageal reflux disease Gastro-oesophageal reflux disease Reflux cough 171J.00
2281.0 Diagnosis of Gastro-oesophageal reflux disease Gastro-oesophageal reflux disease Acid reflux J10y413
2535.0 Diagnosis of Gastro-oesophageal reflux disease Gastro-oesophageal reflux disease Reflux oesophagitis J101100
25610.0 Diagnosis of Gastro-oesophageal reflux disease Gastro-oesophageal reflux disease Oesopheal reflux without mention of oesophagitis J10y400
28619.0 Procedure for Gastro-oesophageal reflux disease Gastro-oesophageal reflux disease Antireflux operation NOS 760Lz00
34005.0 Procedure for Gastro-oesophageal reflux disease Gastro-oesophageal reflux disease Other specified antireflux operation 760Ly00
45360.0 Procedure for Gastro-oesophageal reflux disease Gastro-oesophageal reflux disease Antireflux gastropexy 760L300
48146.0 Procedure for Gastro-oesophageal reflux disease Gastro-oesophageal reflux disease Antireflux gastroplasty 760L311
51400.0 Procedure for Gastro-oesophageal reflux disease Gastro-oesophageal reflux disease Revision of antireflux operations 760M.00
53657.0 Procedure for Gastro-oesophageal reflux disease Gastro-oesophageal reflux disease Antireflux operation using thoracic approach NEC 760L100
67258.0 Procedure for Gastro-oesophageal reflux disease Gastro-oesophageal reflux disease Revision of antireflux operation NOS 760Mz00
68276.0 Procedure for Gastro-oesophageal reflux disease Gastro-oesophageal reflux disease Antireflux procedure using thoracic approach NEC 760L111
7104.0 Diagnosis of Gastro-oesophageal reflux disease Gastro-oesophageal reflux disease Gastro-oesophageal reflux with oesophagitis J101112
7577.0 Diagnosis of Gastro-oesophageal reflux disease Gastro-oesophageal reflux disease Gastric reflux 1957.00
984.0 Diagnosis of Gastro-oesophageal reflux disease Gastro-oesophageal reflux disease Gastro-oesophageal reflux J10y412
Rows: 1
Code Description Disease Category
K21 Gastro-oesophageal reflux disease Gastro-oesophageal reflux disease Diagnosis of Gastro-oesophageal reflux disease
Rows: 15
Code Description Disease Category
G24 Antireflux operations Gastro-oesophageal reflux disease Procedure for Gastro-oesophageal reflux disease
G24.1 Antireflux fundoplication using thoracic approach Gastro-oesophageal reflux disease Procedure for Gastro-oesophageal reflux disease
G24.2 Antireflux operation using thoracic approach NEC Gastro-oesophageal reflux disease Procedure for Gastro-oesophageal reflux disease
G24.3 Antireflux fundoplication using abdominal approach Gastro-oesophageal reflux disease Procedure for Gastro-oesophageal reflux disease
G24.4 Antireflux gastropexy Gastro-oesophageal reflux disease Procedure for Gastro-oesophageal reflux disease
G24.5 Gastroplasty and antireflux procedure HFQ Gastro-oesophageal reflux disease Procedure for Gastro-oesophageal reflux disease
G24.6 Insertion of Angelchick prosthesis Gastro-oesophageal reflux disease Procedure for Gastro-oesophageal reflux disease
G24.8 Other specified antireflux operations Gastro-oesophageal reflux disease Procedure for Gastro-oesophageal reflux disease
G24.9 Unspecified antireflux operations Gastro-oesophageal reflux disease Procedure for Gastro-oesophageal reflux disease
G25 Revision of antireflux operations Gastro-oesophageal reflux disease Procedure for Gastro-oesophageal reflux disease
G25.1 Revision of fundoplication of stomach Gastro-oesophageal reflux disease Procedure for Gastro-oesophageal reflux disease
G25.2 Adjustment to Angelchick prosthesis Gastro-oesophageal reflux disease Procedure for Gastro-oesophageal reflux disease
G25.3 Removal of Angelchick prosthesis Gastro-oesophageal reflux disease Procedure for Gastro-oesophageal reflux disease
G25.8 Other specified revision of antireflux operations Gastro-oesophageal reflux disease Procedure for Gastro-oesophageal reflux disease
G25.9 Unspecified revision of antireflux operations Gastro-oesophageal reflux disease Procedure for Gastro-oesophageal reflux disease

API

To Export Phenotype Details:

Format API
XML site_root/api/v1/public/phenotypes/PH48/version/96/detail/?format=xml
JSON site_root/api/v1/public/phenotypes/PH48/version/96/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of phenotype

details = get_phenotype_detail_by_version('PH48', '96', api_client=client)

To Export Phenotype Code List:

Format API
XML site_root/api/v1/public/phenotypes/PH48/version/96/export/codes/?format=xml
JSON site_root/api/v1/public/phenotypes/PH48/version/96/export/codes/?format=json
CSV site_root/phenotypes/PH48/version/96/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelists of phenotype

codelists = get_phenotype_code_list('PH48', '96', api_client=client)

Version History

Version
ID
Name Owner Publish date
96 Gastro-oesophageal reflux disease ieuan.scanlon 2021-10-06 currently shown

Export - export all codes into a csv file/JSON/XML for the current phenotype version.

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