Raised Total Cholesterol

Kuan V,Denaxas S,Gonzalez-Izquierdo A,Direk K,Bhatti O,Husain S,Sutaria S,Hingorani M,Nitsch D,Parisinos C,Lumbers T,Mathur R,Sofat R,Casas JP,Wong I,Hemingway H,Hingorani A

PH51 / 1529 Clinical-Coded Phenotype

  1. Overview

    Phenotype Type
    Disease or syndrome
    Sex
    Both
    Valid Event Date Range
    01/01/1999 - 01/07/2016
    Coding System
    No data
    Data Sources
    CPRD GOLD
    Collections
    Phenotype Library
    Tags
    No data

  2. Definition

    At the specified date, a patient is defined as having had 'Raised Total Cholesterol' IF they meet the criteria for any of the following on or before the specified date.

    Primary care 1. IF the highest value EVER recorded for Total Cholesterol for a patient on or before the specified date is greater than: a) serum: 5 mmol/L OR b) serum: 193.35 mg/dL OR c) plasma: 4.8544 mmol/L OR d) plasma: 187.7184 mg/dL

  3. Implementation

    Implementation

    No data

  4. Clinical Code List

    No Clinical Code Lists

  5. Publication

    • Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3

      (DOI:10.1016/S2589-7500(19)30012-3)

    Citation Requirements

    No data

  6. API

    To Export Phenotype Details:

    FormatAPI
    JSON site_root/api/v1/phenotypes/PH51/version/1529/detail/?format=json
    R Package

    # Download here

    library(ConceptLibraryClient)


    # Connect to API

    client = ConceptLibraryClient::Connection$new(public=TRUE)


    # Get details of phenotype

    phenotype_details = client$phenotypes$get_detail(
     'PH51',
     version_id=1529
    )

    Py Package

    # Download here

    from pyconceptlibraryclient import Client


    # Connect to API

    client = Client(public=True)


    # Get codelist of phenotype

    phenotype_codelist = client.phenotypes.get_detail(
     'PH51',
     version_id=1529
    )

    To Export Phenotype Code List:

    FormatAPI
    JSON site_root/api/v1/phenotypes/PH51/version/1529/export/codes/?format=json
    CSV site_root/phenotypes/PH51/version/1529/export/codes/
    R Package

    # Download here

    library(ConceptLibraryClient)


    # Connect to API

    client = ConceptLibraryClient::Connection$new(public=TRUE)


    # Get codelist of phenotype

    phenotype_codelist = client$phenotypes$get_codelist(
     'PH51',
     version_id=1529
    )

    Py Package

    # Download here

    from pyconceptlibraryclient import Client


    # Connect to API

    client = Client(public=True)


    # Get codelist of phenotype

    phenotype_codelist = client.phenotypes.get_codelist(
     'PH51',
     version_id=1529
    )

  7. Version History

    Version IDNameOwnerPublish date
    1529 Raised Total Cholesterol ieuan.scanlon2021-10-27currently shown