Phenotype Library | phenotype: Iron deficiency anaemia

Iron deficiency anaemia

Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A

PH54

Version ID

108

Type

Disease or Syndrome

Data Sources

CPRD GOLD , HES Admitted Patient Care data for CPRD GOLD

Valid event data range

01/01/1999 - 01/07/2016

Sex

♀ Female ♂ Male

Agreement Date

2019-05-20

Coding system

Read codes v2 ICD10 codes Med codes

Collections

CALIBER Phenotype Library

Definition

At the specified date, a patient is defined as having had 'Iron deficiency anaemia' IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:

Primary care

'Iron deficiency anaemia' diagnosis or history of diagnosis during a consultation OR Secondary care (ICD10)
ALL diagnoses of 'Iron deficiency anaemia' or history of diagnosis during a hospitalization

Implementation

PhenoFlow Implementation:

https://kclhi.org/phenoflow/phenotype/download/161

Publications

Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3

Clinical Code List

CSV

JSON

XML

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C831/2801 Iron deficiency anaemia - Primary care - Read codes v2

Rows: 19

Code	Description	Disease	Medcode	Category
D0...11	Asiderotic anaemia	Iron deficiency anaemia	94528	Diagnosis of Iron deficiency anaemia
D0...12	Sideropenic anaemia	Iron deficiency anaemia	19383	Diagnosis of Iron deficiency anaemia
D00..00	Iron deficiency anaemias	Iron deficiency anaemia	795	Diagnosis of Iron deficiency anaemia
D000.00	Iron deficiency anaemia due to chronic blood loss	Iron deficiency anaemia	27726	Diagnosis of Iron deficiency anaemia
D000.11	Normocytic anaemia due to chronic blood loss	Iron deficiency anaemia	6816	Diagnosis of Iron deficiency anaemia
D000.12	Iron deficiency anaemia due to blood loss	Iron deficiency anaemia	48338	Diagnosis of Iron deficiency anaemia
D001.00	Iron deficiency anaemia due to dietary causes	Iron deficiency anaemia	21127	Diagnosis of Iron deficiency anaemia
D00y.00	Other specified iron deficiency anaemia	Iron deficiency anaemia	33420	Diagnosis of Iron deficiency anaemia
D00y.11	Kelly - Paterson syndrome	Iron deficiency anaemia	31347	Diagnosis of Iron deficiency anaemia
D00y.12	Plummer - Vinson syndrome	Iron deficiency anaemia	20123	Diagnosis of Iron deficiency anaemia
D00y000	Sideropenic dysphagia	Iron deficiency anaemia	55478	Diagnosis of Iron deficiency anaemia
D00y011	Kelly-Paterson syndrome	Iron deficiency anaemia	36965	Diagnosis of Iron deficiency anaemia
D00y012	Plummer-Vinson syndrome	Iron deficiency anaemia	35199	Diagnosis of Iron deficiency anaemia
D00yz00	Other specified iron deficiency anaemia NOS	Iron deficiency anaemia	9537	Diagnosis of Iron deficiency anaemia
D00z.00	Unspecified iron deficiency anaemia	Iron deficiency anaemia	18137	Diagnosis of Iron deficiency anaemia
D00z000	Achlorhydric anaemia	Iron deficiency anaemia	19951	Diagnosis of Iron deficiency anaemia
D00z100	Chlorotic anaemia	Iron deficiency anaemia	57954	Diagnosis of Iron deficiency anaemia
D00zz00	Iron deficiency anaemia NOS	Iron deficiency anaemia	15439	Diagnosis of Iron deficiency anaemia
Dyu0000	[X]Other iron deficiency anaemias	Iron deficiency anaemia	4858	Diagnosis of Iron deficiency anaemia

C832/2803 Iron deficiency anaemia - Primary care - Med codes

Rows: 19

Code	Description	Disease	ReadcodeDescr	Readcode
15439	Diagnosis of Iron deficiency anaemia	Iron deficiency anaemia	Iron deficiency anaemia NOS	D00zz00
18137	Diagnosis of Iron deficiency anaemia	Iron deficiency anaemia	Unspecified iron deficiency anaemia	D00z.00
19383	Diagnosis of Iron deficiency anaemia	Iron deficiency anaemia	Sideropenic anaemia	D0...12
19951	Diagnosis of Iron deficiency anaemia	Iron deficiency anaemia	Achlorhydric anaemia	D00z000
20123	Diagnosis of Iron deficiency anaemia	Iron deficiency anaemia	Plummer - Vinson syndrome	D00y.12
21127	Diagnosis of Iron deficiency anaemia	Iron deficiency anaemia	Iron deficiency anaemia due to dietary causes	D001.00
27726	Diagnosis of Iron deficiency anaemia	Iron deficiency anaemia	Iron deficiency anaemia due to chronic blood loss	D000.00
31347	Diagnosis of Iron deficiency anaemia	Iron deficiency anaemia	Kelly - Paterson syndrome	D00y.11
33420	Diagnosis of Iron deficiency anaemia	Iron deficiency anaemia	Other specified iron deficiency anaemia	D00y.00
35199	Diagnosis of Iron deficiency anaemia	Iron deficiency anaemia	Plummer-Vinson syndrome	D00y012
36965	Diagnosis of Iron deficiency anaemia	Iron deficiency anaemia	Kelly-Paterson syndrome	D00y011
48338	Diagnosis of Iron deficiency anaemia	Iron deficiency anaemia	Iron deficiency anaemia due to blood loss	D000.12
4858	Diagnosis of Iron deficiency anaemia	Iron deficiency anaemia	[X]Other iron deficiency anaemias	Dyu0000
55478	Diagnosis of Iron deficiency anaemia	Iron deficiency anaemia	Sideropenic dysphagia	D00y000
57954	Diagnosis of Iron deficiency anaemia	Iron deficiency anaemia	Chlorotic anaemia	D00z100
6816	Diagnosis of Iron deficiency anaemia	Iron deficiency anaemia	Normocytic anaemia due to chronic blood loss	D000.11
795	Diagnosis of Iron deficiency anaemia	Iron deficiency anaemia	Iron deficiency anaemias	D00..00
94528	Diagnosis of Iron deficiency anaemia	Iron deficiency anaemia	Asiderotic anaemia	D0...11
9537	Diagnosis of Iron deficiency anaemia	Iron deficiency anaemia	Other specified iron deficiency anaemia NOS	D00yz00

C833/2805 Iron deficiency anaemia - Secondary care - Diagnoses - ICD10 codes

Rows: 1

Code	Description	Disease	Category
D50	Iron deficiency anaemia	Iron deficiency anaemia	Diagnosis of Iron deficiency anaemia

API

To Export Phenotype Details:

Format	API
XML	site_root/api/v1/public/phenotypes/PH54/version/108/detail/?format=xml
JSON	site_root/api/v1/public/phenotypes/PH54/version/108/detail/?format=json
R Package	`# Download here library(ConceptLibraryClient) # Connect to API client = connect_to_API(public=TRUE) # Get details of phenotype details = get_phenotype_detail_by_version('PH54', '108', api_client=client)`

To Export Phenotype Code List:

Format	API
XML	site_root/api/v1/public/phenotypes/PH54/version/108/export/codes/?format=xml
JSON	site_root/api/v1/public/phenotypes/PH54/version/108/export/codes/?format=json
CSV	site_root/phenotypes/PH54/version/108/export/codes/
R Package	`# Download here library(ConceptLibraryClient) # Connect to API client = connect_to_API(public=TRUE) # Get codelists of phenotype codelists = get_phenotype_code_list('PH54', '108', api_client=client)`

Version History

Version ID	Name	Owner	Publish date
108	Iron deficiency anaemia	ieuan.scanlon	2021-10-06	currently shown