Data source:
We used the Clinical Practice Research Datalink (CPRD), a large primary care database that holds complete electronic patient records (including diagnoses, prescriptions and referrals) from participating family practices across the UK. A hierarchical clinical coding system (Read) is used to record the data. In July 2012, data were available for 644 practices and 13,772,992 patients. Full details of the database have been provided elsewhere.
Diabetes cohort:
We extracted data from 1 April 2006 to 31 March 2012 and, for ease of reporting and analysing, aggregated information into six financial years. Within each year, practice inclusion eligibility was determined by a CPRD assessment algorithm, which informs on practices considered to be of research standard; therefore, our cohort of practices varied over time. For each research standard practice and year, we defined as eligible patients those who were registered with the practice for the full year and were aged 18 years or over in that year. From these patients, using relevant Read codes for type 2 diabetes (e.g. C10F.00: Type 2 diabetes mellitus) and excluding those treated with insulin within 2 years of diagnosis, we identified 246,544 patients over the study period. Diagnoses were not constrained to the study period and a relevant code prior to the study as well as during the study period would flag a patient from the respective year onwards. Data on sex, age and removal from the database due to deaths were available and complete for all patients.We extracted data on diabetes-related macrovascular (myocardial infarction, stroke, peripheral vascular disease or amputation) and microvascular (retinopathy, neuropathy, nephropathy [chronic kidney disease stages 4–5] or foot ulcer) complications as well as comorbidities (asthma, coronary heart disease, chronic kidney disease [excluded from microvascular analysis], chronic obstructive pulmonary disease, depression, dementia, severe mental illness, heart failure, hypertension, stroke [excluded from macrovascular analysis], cancer, epilepsy, osteoarthritis, osteoporosis and hypothyroidism). Although we aimed to include all conditions associated with diabetes, the choice was partially determined by the domains incentivised under the Quality and Outcomes Framework (QOF), for which accuracy of diagnosis is considered high. Information was also extracted on smoking (never smoked, current, exsmoker and missing data),BMI, HbA1c levels (%), cholesterol levels (mmol/l) and systolic/diastolic BP (mmHg). Biometric measurement data were cleaned and we calculated patient means for each year when more than one relevant record was available. Using product lists we determined prescription prevalence (at least one) for relevant medications: ACE inhibitors, acarbose, α-blockers, anticoagulants, antiplatelet agents, β-blockers, calcium-channel blockers, thiazide diuretics, loop diuretics, dipeptidyl peptidase-4 inhibitors, glucagon-like peptide- 1 agonists, statins and other lipid-lowering drugs, meglitinides , metformin, sulfonylureas and thiazolidinediones. For approximately 60% of the practices, records were linked to Office of National Statistics (ONS) mortality data and we had access to death dates for all their patients. For these, using ICD-10 codes (www.who.int/classifications/icd/en/) we were able to estimate deathslinked to specific causes (underlying or in the top three): diabetes (E10–E16), ischaemic heart disease (I21–I22), stroke (I60–I64) or stroke excluding bleeds (excluding I63).
Evangelos Kontopantelis, David A Springate, David Reeves, Darren M. Aschroff, Martin Rutter, Iain Buchan, Tim Doran, Glucose, blood pressure and cholesterol levels and their relationships to clinical outcomes in type 2 diabetes: a retrospective cohort study. Diabetologia, 58:505-518, 2015.
Code | Description | Entity type | Category | Coding System (Read) |
---|---|---|---|---|
7L06.00 | Amputation of leg | Macrovascular_complications | diagnostic | Read |
7L06400 | Amputation below knee | Macrovascular_complications | diagnostic | Read |
7L07.00 | Amputation of foot | Macrovascular_complications | diagnostic | Read |
7L07000 | Amputation through ankle | Macrovascular_complications | diagnostic | Read |
7L07012 | Syme amputation of foot through ankle | Macrovascular_complications | diagnostic | Read |
7L07300 | Amputation through metatarsal bones | Macrovascular_complications | diagnostic | Read |
7L07y00 | Other specified amputation of foot | Macrovascular_complications | diagnostic | Read |
7L07z00 | Amputation of foot NOS | Macrovascular_complications | diagnostic | Read |
7L08.00 | Amputation of toe | Macrovascular_complications | diagnostic | Read |
7L08011 | Amputation great toe | Macrovascular_complications | diagnostic | Read |
7L08100 | Amputation of phalanx of toe | Macrovascular_complications | diagnostic | Read |
7L08300 | Amputation lesser toe | Macrovascular_complications | diagnostic | Read |
7L08y00 | Other specified amputation of toe | Macrovascular_complications | diagnostic | Read |
7L08z00 | Amputation of toe NOS | Macrovascular_complications | diagnostic | Read |
7L0L200 | Amputation of supernumerary toe | Macrovascular_complications | diagnostic | Read |
G30..00 | Acute myocardial infarction | Macrovascular_complications | diagnostic | Read |
G30..12 | Coronary thrombosis | Macrovascular_complications | diagnostic | Read |
G30..13 | Cardiac rupture following myocardial infarction (MI) | Macrovascular_complications | diagnostic | Read |
G30..15 | MI - acute myocardial infarction | Macrovascular_complications | diagnostic | Read |
G30..16 | Thrombosis - coronary | Macrovascular_complications | diagnostic | Read |
G30..17 | Silent myocardial infarction | Macrovascular_complications | diagnostic | Read |
G300.00 | Acute anterolateral infarction | Macrovascular_complications | diagnostic | Read |
G301.00 | Other specified anterior myocardial infarction | Macrovascular_complications | diagnostic | Read |
G301000 | Acute anteroapical infarction | Macrovascular_complications | diagnostic | Read |
G301100 | Acute anteroseptal infarction | Macrovascular_complications | diagnostic | Read |
G301z00 | Anterior myocardial infarction NOS | Macrovascular_complications | diagnostic | Read |
G302.00 | Acute inferolateral infarction | Macrovascular_complications | diagnostic | Read |
G303.00 | Acute inferoposterior infarction | Macrovascular_complications | diagnostic | Read |
G304.00 | Posterior myocardial infarction NOS | Macrovascular_complications | diagnostic | Read |
G305.00 | Lateral myocardial infarction NOS | Macrovascular_complications | diagnostic | Read |
G306.00 | True posterior myocardial infarction | Macrovascular_complications | diagnostic | Read |
G307.00 | Acute subendocardial infarction | Macrovascular_complications | diagnostic | Read |
G307000 | Acute non-Q wave infarction | Macrovascular_complications | diagnostic | Read |
G307100 | Acute non-ST segment elevation myocardial infarction | Macrovascular_complications | diagnostic | Read |
G308.00 | Inferior myocardial infarction NOS | Macrovascular_complications | diagnostic | Read |
G309.00 | Acute Q-wave infarct | Macrovascular_complications | diagnostic | Read |
G30B.00 | Acute posterolateral myocardial infarction | Macrovascular_complications | diagnostic | Read |
G30X.00 | Acute transmural myocardial infarction of unspecif site | Macrovascular_complications | diagnostic | Read |
G30X000 | Acute ST segment elevation myocardial infarction | Macrovascular_complications | diagnostic | Read |
G30y.00 | Other acute myocardial infarction | Macrovascular_complications | diagnostic | Read |
G30y100 | Acute papillary muscle infarction | Macrovascular_complications | diagnostic | Read |
G30y200 | Acute septal infarction | Macrovascular_complications | diagnostic | Read |
G30yz00 | Other acute myocardial infarction NOS | Macrovascular_complications | diagnostic | Read |
G30z.00 | Acute myocardial infarction NOS | Macrovascular_complications | diagnostic | Read |
G311000 | Myocardial infarction aborted | Macrovascular_complications | diagnostic | Read |
G311011 | MI - myocardial infarction aborted | Macrovascular_complications | diagnostic | Read |
G311500 | Acute coronary syndrome | Macrovascular_complications | diagnostic | Read |
G35..00 | Subsequent myocardial infarction | Macrovascular_complications | diagnostic | Read |
G350.00 | Subsequent myocardial infarction of anterior wall | Macrovascular_complications | diagnostic | Read |
G351.00 | Subsequent myocardial infarction of inferior wall | Macrovascular_complications | diagnostic | Read |
G353.00 | Subsequent myocardial infarction of other sites | Macrovascular_complications | diagnostic | Read |
G35X.00 | Subsequent myocardial infarction of unspecified site | Macrovascular_complications | diagnostic | Read |
G360.00 | Haemopericardium/current comp folow acut myocard infarct | Macrovascular_complications | diagnostic | Read |
G362.00 | Ventric septal defect/curr comp fol acut myocardal infarctn | Macrovascular_complications | diagnostic | Read |
G363.00 | Ruptur cardiac wall w'out haemopericard/cur comp fol ac MI | Macrovascular_complications | diagnostic | Read |
G364.00 | Ruptur chordae tendinae/curr comp fol acute myocard infarct | Macrovascular_complications | diagnostic | Read |
G365.00 | Rupture papillary muscle/curr comp fol acute myocard infarct | Macrovascular_complications | diagnostic | Read |
G38..00 | Postoperative myocardial infarction | Macrovascular_complications | diagnostic | Read |
G380.00 | Postoperative transmural myocardial infarction anterior wall | Macrovascular_complications | diagnostic | Read |
G381.00 | Postoperative transmural myocardial infarction inferior wall | Macrovascular_complications | diagnostic | Read |
G384.00 | Postoperative subendocardial myocardial infarction | Macrovascular_complications | diagnostic | Read |
G38z.00 | Postoperative myocardial infarction; unspecified | Macrovascular_complications | diagnostic | Read |
G574011 | Cardiac arrest-ventricular fibrillation | Macrovascular_complications | diagnostic | Read |
G575.00 | Cardiac arrest | Macrovascular_complications | diagnostic | Read |
G575.11 | Cardio-respiratory arrest | Macrovascular_complications | diagnostic | Read |
G575.12 | Asystole | Macrovascular_complications | diagnostic | Read |
G575000 | Cardiac arrest with successful resuscitation | Macrovascular_complications | diagnostic | Read |
G575100 | Sudden cardiac death; so described | Macrovascular_complications | diagnostic | Read |
G575z00 | Cardiac arrest; unspecified | Macrovascular_complications | diagnostic | Read |
G61..00 | Intracerebral haemorrhage | Macrovascular_complications | diagnostic | Read |
G61..11 | CVA - cerebrovascular accid due to intracerebral haemorrhage | Macrovascular_complications | diagnostic | Read |
G61..12 | Stroke due to intracerebral haemorrhage | Macrovascular_complications | diagnostic | Read |
G610.00 | Cortical haemorrhage | Macrovascular_complications | diagnostic | Read |
G611.00 | Internal capsule haemorrhage | Macrovascular_complications | diagnostic | Read |
G612.00 | Basal nucleus haemorrhage | Macrovascular_complications | diagnostic | Read |
G613.00 | Cerebellar haemorrhage | Macrovascular_complications | diagnostic | Read |
G614.00 | Pontine haemorrhage | Macrovascular_complications | diagnostic | Read |
G615.00 | Bulbar haemorrhage | Macrovascular_complications | diagnostic | Read |
G616.00 | External capsule haemorrhage | Macrovascular_complications | diagnostic | Read |
G617.00 | Intracerebral haemorrhage; intraventricular | Macrovascular_complications | diagnostic | Read |
G618.00 | Intracerebral haemorrhage; multiple localized | Macrovascular_complications | diagnostic | Read |
G61X.00 | Intracerebral haemorrhage in hemisphere; unspecified | Macrovascular_complications | diagnostic | Read |
G61X000 | Left sided intracerebral haemorrhage; unspecified | Macrovascular_complications | diagnostic | Read |
G61X100 | Right sided intracerebral haemorrhage; unspecified | Macrovascular_complications | diagnostic | Read |
G61z.00 | Intracerebral haemorrhage NOS | Macrovascular_complications | diagnostic | Read |
G63..00 | Precerebral arterial occlusion | Macrovascular_complications | diagnostic | Read |
G63..11 | Infarction - precerebral | Macrovascular_complications | diagnostic | Read |
G632.00 | Vertebral artery occlusion | Macrovascular_complications | diagnostic | Read |
G63y000 | Cerebral infarct due to thrombosis of precerebral arteries | Macrovascular_complications | diagnostic | Read |
G63y100 | Cerebral infarction due to embolism of precerebral arteries | Macrovascular_complications | diagnostic | Read |
G64..12 | Infarction - cerebral | Macrovascular_complications | diagnostic | Read |
G64..13 | Stroke due to cerebral arterial occlusion | Macrovascular_complications | diagnostic | Read |
G640.00 | Cerebral thrombosis | Macrovascular_complications | diagnostic | Read |
G640000 | Cerebral infarction due to thrombosis of cerebral arteries | Macrovascular_complications | diagnostic | Read |
G641.00 | Cerebral embolism | Macrovascular_complications | diagnostic | Read |
G641.11 | Cerebral embolus | Macrovascular_complications | diagnostic | Read |
G641000 | Cerebral infarction due to embolism of cerebral arteries | Macrovascular_complications | diagnostic | Read |
G64z.00 | Cerebral infarction NOS | Macrovascular_complications | diagnostic | Read |
G64z.11 | Brainstem infarction NOS | Macrovascular_complications | diagnostic | Read |
G64z.12 | Cerebellar infarction | Macrovascular_complications | diagnostic | Read |
G64z000 | Brainstem infarction | Macrovascular_complications | diagnostic | Read |
G64z111 | Lateral medullary syndrome | Macrovascular_complications | diagnostic | Read |
G64z200 | Left sided cerebral infarction | Macrovascular_complications | diagnostic | Read |
G64z300 | Right sided cerebral infarction | Macrovascular_complications | diagnostic | Read |
G64z400 | Infarction of basal ganglia | Macrovascular_complications | diagnostic | Read |
G66..00 | Stroke and cerebrovascular accident unspecified | Macrovascular_complications | diagnostic | Read |
G66..11 | CVA unspecified | Macrovascular_complications | diagnostic | Read |
G66..12 | Stroke unspecified | Macrovascular_complications | diagnostic | Read |
G66..13 | CVA - Cerebrovascular accident unspecified | Macrovascular_complications | diagnostic | Read |
G661.00 | Anterior cerebral artery syndrome | Macrovascular_complications | diagnostic | Read |
G662.00 | Posterior cerebral artery syndrome | Macrovascular_complications | diagnostic | Read |
G663.00 | Brain stem stroke syndrome | Macrovascular_complications | diagnostic | Read |
G664.00 | Cerebellar stroke syndrome | Macrovascular_complications | diagnostic | Read |
G665.00 | Pure motor lacunar syndrome | Macrovascular_complications | diagnostic | Read |
G666.00 | Pure sensory lacunar syndrome | Macrovascular_complications | diagnostic | Read |
G667.00 | Left sided CVA | Macrovascular_complications | diagnostic | Read |
G668.00 | Right sided CVA | Macrovascular_complications | diagnostic | Read |
G671.00 | Generalised ischaemic cerebrovascular disease NOS | Macrovascular_complications | diagnostic | Read |
G671000 | Acute cerebrovascular insufficiency NOS | Macrovascular_complications | diagnostic | Read |
G671z00 | Generalised ischaemic cerebrovascular disease NOS | Macrovascular_complications | diagnostic | Read |
G676000 | Cereb infarct due cerebral venous thrombosis; nonpyogenic | Macrovascular_complications | diagnostic | Read |
G6W..00 | Cereb infarct due unsp occlus/stenos precerebr arteries | Macrovascular_complications | diagnostic | Read |
G6X..00 | Cerebrl infarctn due/unspcf occlusn or sten/cerebrl artrs | Macrovascular_complications | diagnostic | Read |
G70..00 | Atherosclerosis | Macrovascular_complications | diagnostic | Read |
G700.00 | Aortic atherosclerosis | Macrovascular_complications | diagnostic | Read |
G73..00 | Other peripheral vascular disease | Macrovascular_complications | diagnostic | Read |
G73..12 | Ischaemia of legs | Macrovascular_complications | diagnostic | Read |
G73y.00 | Other specified peripheral vascular disease | Macrovascular_complications | diagnostic | Read |
G73yz00 | Other specified peripheral vascular disease NOS | Macrovascular_complications | diagnostic | Read |
G73z.00 | Peripheral vascular disease NOS | Macrovascular_complications | diagnostic | Read |
G73z000 | Intermittent claudication | Macrovascular_complications | diagnostic | Read |
G73z011 | Claudication | Macrovascular_complications | diagnostic | Read |
G73zz00 | Peripheral vascular disease NOS | Macrovascular_complications | diagnostic | Read |
G742z00 | Peripheral arterial embolism and thrombosis NOS | Macrovascular_complications | diagnostic | Read |
G74y300 | Embolism and thrombosis of the iliac artery unspecified | Macrovascular_complications | diagnostic | Read |
G76z000 | Iliac artery occlusion | Macrovascular_complications | diagnostic | Read |
Gyu3400 | [X]Acute transmural myocardial infarction of unspecif site | Macrovascular_complications | diagnostic | Read |
Gyu3600 | [X]Subsequent myocardial infarction of unspecified site | Macrovascular_complications | diagnostic | Read |
Gyu6200 | [X]Other intracerebral haemorrhage | Macrovascular_complications | diagnostic | Read |
Gyu6300 | [X]Cerebrl infarctn due/unspcf occlusn or sten/cerebrl artrs | Macrovascular_complications | diagnostic | Read |
Gyu6400 | [X]Other cerebral infarction | Macrovascular_complications | diagnostic | Read |
Gyu6F00 | [X]Intracerebral haemorrhage in hemisphere; unspecified | Macrovascular_complications | diagnostic | Read |
Gyu6G00 | [X]Cereb infarct due unsp occlus/stenos precerebr arteries | Macrovascular_complications | diagnostic | Read |
Gyu7400 | [X]Other specified peripheral vascular diseases | Macrovascular_complications | diagnostic | Read |
M271000 | Ischaemic ulcer diabetic foot | Macrovascular_complications | diagnostic | Read |
R054300 | [D]Widespread diabetic foot gangrene | Macrovascular_complications | diagnostic | Read |
To Export Phenotype Details:
Format | API |
---|---|
XML | site_root/api/v1/public/phenotypes/PH544/version/1088/detail/?format=xml |
JSON | site_root/api/v1/public/phenotypes/PH544/version/1088/detail/?format=json |
R Package |
|
To Export Phenotype Code List:
Format | API |
---|---|
XML | site_root/api/v1/public/phenotypes/PH544/version/1088/export/codes/?format=xml |
JSON | site_root/api/v1/public/phenotypes/PH544/version/1088/export/codes/?format=json |
CSV | site_root/phenotypes/PH544/version/1088/export/codes/ |
R Package |
|
Version ID |
Name | Owner | Publish date | |
---|---|---|---|---|
1088 | Macrovascular Complications | ieuan.scanlon | 2021-10-06 | currently shown |
Export - export all codes into a csv file/JSON/XML for the current phenotype version.
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