Low HDL-C

Kuan V,Denaxas S,Gonzalez-Izquierdo A,Direk K,Bhatti O,Husain S,Sutaria S,Hingorani M,Nitsch D,Parisinos C,Lumbers T,Mathur R,Sofat R,Casas JP,Wong I,Hemingway H,Hingorani A

PH59 / 1532 Clinical-Coded Phenotype

  1. Overview

    Phenotype Type
    Disease or syndrome
    Sex
    Both
    Valid Event Date Range
    01/01/1999 - 01/07/2016
    Coding System
    No data
    Data Sources
    CPRD GOLD
    Collections
    Phenotype Library
    Tags
    No data

  2. Definition

    At the specified date, a patient is defined as having had Low HDL Cholesterol IF they meet the criteria for any of the following on or before the specified date.

    Primary care

    IF FEMALE the lowest value EVER recorded for HDL Cholesterol for a patient on or before the specified date is less than: a) serum: 1.2 mmol/L OR b) serum: 46.404 mg/dL OR c) plasma: 1.1650 mmol/L OR d) plasma: 45.0524 mg/dL

    IF MALE the lowest value EVER recorded for HDL Cholesterol for a patient on or before the specified date is less than: a) serum: 1 mmol/L OR b) serum: 38.67 mg/dL OR c) plasma: 0.9709 mmol/L OR d) plasma: 37.5437 mg/dL

  3. Implementation

    Implementation

    No data

  4. Clinical Code List

    No Clinical Code Lists

  5. Publication

    • Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3

      (DOI:10.1016/S2589-7500(19)30012-3)

    Citation Example

    Kuan V,Denaxas S,Gonzalez-Izquierdo A,Direk K,Bhatti O,Husain S,Sutaria S,Hingorani M,Nitsch D,Parisinos C,Lumbers T,Mathur R,Sofat R,Casas JP,Wong I,Hemingway H,Hingorani A. PH59 / 1532 - Low HDL-C. Phenotype Library [Online]. 27 October 2021. Available from: http://phenotypes.healthdatagateway.org/phenotypes/PH59/version/1532/detail/. [Accessed 30 October 2024]

  6. API

    To Export Phenotype Details:

    FormatAPI
    JSON site_root/api/v1/phenotypes/PH59/version/1532/detail/?format=json
    R Package

    # Download here

    library(ConceptLibraryClient)


    # Connect to API

    client = ConceptLibraryClient::Connection$new(public=TRUE)


    # Get details of phenotype

    phenotype_details = client$phenotypes$get_detail(
     'PH59',
     version_id=1532
    )

    Py Package

    # Download here

    from pyconceptlibraryclient import Client


    # Connect to API

    client = Client(public=True)


    # Get codelist of phenotype

    phenotype_codelist = client.phenotypes.get_detail(
     'PH59',
     version_id=1532
    )

    To Export Phenotype Code List:

    FormatAPI
    JSON site_root/api/v1/phenotypes/PH59/version/1532/export/codes/?format=json
    CSV site_root/phenotypes/PH59/version/1532/export/codes/
    R Package

    # Download here

    library(ConceptLibraryClient)


    # Connect to API

    client = ConceptLibraryClient::Connection$new(public=TRUE)


    # Get codelist of phenotype

    phenotype_codelist = client$phenotypes$get_codelist(
     'PH59',
     version_id=1532
    )

    Py Package

    # Download here

    from pyconceptlibraryclient import Client


    # Connect to API

    client = Client(public=True)


    # Get codelist of phenotype

    phenotype_codelist = client.phenotypes.get_codelist(
     'PH59',
     version_id=1532
    )

  7. Version History

    Version IDNameOwnerPublish date
    1532 Low HDL-C ieuan.scanlon2021-10-27currently shown