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Low HDL-C

Kuan V,Denaxas S,Gonzalez-Izquierdo A,Direk K,Bhatti O,Husain S,Sutaria S,Hingorani M,Nitsch D,Parisinos C,Lumbers T,Mathur R,Sofat R,Casas JP,Wong I,Hemingway H,Hingorani A

Type
Disease or Syndrome
ID
PH59
Version ID
1532
Data Sources
Valid event data range
01/01/1999 - 01/07/2016
Sex
Female,Male
Agreement Date
2019-05-20
Coding system
Tags /Collections
Phenotype Library

Definition

At the specified date, a patient is defined as having had Low HDL Cholesterol IF they meet the criteria for any of the following on or before the specified date.

Primary care

IF FEMALE the lowest value EVER recorded for HDL Cholesterol for a patient on or before the specified date is less than: a) serum: 1.2 mmol/L OR b) serum: 46.404 mg/dL OR c) plasma: 1.1650 mmol/L OR d) plasma: 45.0524 mg/dL

IF MALE the lowest value EVER recorded for HDL Cholesterol for a patient on or before the specified date is less than: a) serum: 1 mmol/L OR b) serum: 38.67 mg/dL OR c) plasma: 0.9709 mmol/L OR d) plasma: 37.5437 mg/dL

Publications

  • Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3

Clinical Code List

no concepts

API

To Export Phenotype Details:

Format API
XML site_root/api/v1/public/phenotypes/PH59/version/1532/detail/?format=xml
JSON site_root/api/v1/public/phenotypes/PH59/version/1532/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of phenotype

details = get_phenotype_detail_by_version('PH59', '1532', api_client=client)

To Export Phenotype Code List:

Format API
XML site_root/api/v1/public/phenotypes/PH59/version/1532/export/codes/?format=xml
JSON site_root/api/v1/public/phenotypes/PH59/version/1532/export/codes/?format=json
CSV site_root/phenotypes/PH59/version/1532/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelists of phenotype

codelists = get_phenotype_code_list('PH59', '1532', api_client=client)

Version History

Version
ID
Name Owner Publish date
1532 Low HDL-C ieuan.scanlon 2021-10-27 currently shown

Export - export all codes into a csv file/JSON/XML for the current phenotype version.

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