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Ankylosing Spondylitis

Sara Muller, Samantha L Hider, Karim Raza, Rebecca J Stack, Richard A Hayward, Christian D Mallen

Type
Disease or Syndrome
ID
PH595
Version ID
1190
Data Sources
Valid event data range
01/01/2010 - 31/12/2012
Sex
Female, Male
Agreement Date
2015-12-23
Coding system
Read codes v2
Tags /Collections
ClinicalCodes Repository Phenotype Library

Definition

The original algorithm consisted of two criteria. Individuals meeting at least one were considered to have RA. Criterion 1: ≥1 RA Read code and a disease modifying antirheumatic drug (DMARD) without an alternative indication. Criterion 2: ≥2 RA Read codes, with at least one ‘strong’ code and no alternative diagnoses. Lists of codes for consultations and prescriptions were obtained from the authors of the original algorithm where these were available, or compiled based on the original description and clinical knowledge. 4161 people with a first Read code for RA between 1 January 2010 and 31 December 2012 were selected from the Clinical Practice Research Datalink (CPRD, successor to the GPRD), and the criteria applied.

Publications

  • Sara Muller, Samantha L Hider,Karim Raza, Rebecca J Stack, Richard A Hayward, Christian D Mallen, An algorithm to identify rheumatoid arthritis in primary care a Clinical Practice Research Datalink study. BMJ Open, 5(e009309), 2015.

Clinical Code List

Rows: 115
Code Description Entity type Category Coding System (Read)
388p.00 BASDAI - Bath ankylosing spondylitis disease activity index res34: ankylosing_spondylitis diagnostic Read
43b2.00 Immune complex IgM level res34: ankylosing_spondylitis diagnostic Read
AD61.00 Behcet's syndrome res34: ankylosing_spondylitis diagnostic Read
C332100 Cryoglobulinaemic vasculitis res34: ankylosing_spondylitis diagnostic Read
F371100 Polyneuropathy in polyarteritis nodosa res34: ankylosing_spondylitis diagnostic Read
F396300 Myopathy due to polyarteritis nodosa res34: ankylosing_spondylitis diagnostic Read
F421E00 Retinal vasculitis NOS res34: ankylosing_spondylitis diagnostic Read
F483511 Oculomotor apraxia - Cogan type res34: ankylosing_spondylitis diagnostic Read
F4A5111 Cogan's syndrome res34: ankylosing_spondylitis diagnostic Read
F552000 Malleus ankylosis res34: ankylosing_spondylitis diagnostic Read
F552100 Ossicle ankylosis (excluding malleus) res34: ankylosing_spondylitis diagnostic Read
G42y000 Pulmonary arteritis res34: ankylosing_spondylitis diagnostic Read
G674.00 Cerebral arteritis res34: ankylosing_spondylitis diagnostic Read
G731.00 Thromboangiitis obliterans res34: ankylosing_spondylitis diagnostic Read
G731z00 Thromboangiitis obliterans NOS res34: ankylosing_spondylitis diagnostic Read
G75..00 Polyarteritis nodosa and allied conditions res34: ankylosing_spondylitis diagnostic Read
G750.00 Polyarteritis nodosa res34: ankylosing_spondylitis diagnostic Read
G750.11 Necrotising angiitis res34: ankylosing_spondylitis diagnostic Read
G751.00 Acute febrile mucocutaneous lymph node syndrome res34: ankylosing_spondylitis diagnostic Read
G751000 Kawasaki disease res34: ankylosing_spondylitis diagnostic Read
G751z00 Acute febrile mucocutaneous lymph node syndrome NOS res34: ankylosing_spondylitis diagnostic Read
G752.00 Hypersensitivity angiitis res34: ankylosing_spondylitis diagnostic Read
G752.11 Hypersensitivity arteritis res34: ankylosing_spondylitis diagnostic Read
G752000 Goodpasture's syndrome res34: ankylosing_spondylitis diagnostic Read
G752111 Antiglomerular basement membrane disease res34: ankylosing_spondylitis diagnostic Read
G752112 Anti GBM disease - Antiglomerular basement membrane disease res34: ankylosing_spondylitis diagnostic Read
G752z00 Hypersensitivity angiitis NOS res34: ankylosing_spondylitis diagnostic Read
G754.00 Wegener's granulomatosis res34: ankylosing_spondylitis diagnostic Read
G755.00 Giant cell arteritis res34: ankylosing_spondylitis diagnostic Read
G755000 Cranial arteritis res34: ankylosing_spondylitis diagnostic Read
G755100 Temporal arteritis res34: ankylosing_spondylitis diagnostic Read
G755z00 Giant cell arteritis NOS res34: ankylosing_spondylitis diagnostic Read
G756000 Moschcowitz syndrome res34: ankylosing_spondylitis diagnostic Read
G756100 Thrombotic thrombocytopenic purpura res34: ankylosing_spondylitis diagnostic Read
G756z00 Thrombotic microangiopathy NOS res34: ankylosing_spondylitis diagnostic Read
G757.00 Takayasu's disease res34: ankylosing_spondylitis diagnostic Read
G757.11 Aortic arch arteritis res34: ankylosing_spondylitis diagnostic Read
G757.12 Pulseless disease res34: ankylosing_spondylitis diagnostic Read
G759.00 Juvenile polyarteritis res34: ankylosing_spondylitis diagnostic Read
G75A.00 Microscopic polyangiitis res34: ankylosing_spondylitis diagnostic Read
G75z.00 Polyarteritis nodosa and allied conditions NOS res34: ankylosing_spondylitis diagnostic Read
G766.00 Arteritis unspecified res34: ankylosing_spondylitis diagnostic Read
G76B.00 Vasculitis res34: ankylosing_spondylitis diagnostic Read
J016.00 Ankylosis of teeth res34: ankylosing_spondylitis diagnostic Read
J046000 Temporomandibular joint ankylosis res34: ankylosing_spondylitis diagnostic Read
K01x300 Nephrotic syndrome in polyarteritis nodosa res34: ankylosing_spondylitis diagnostic Read
K425200 Ulceration of vulva in Behcet's disease res34: ankylosing_spondylitis diagnostic Read
M152.11 Nodular vasculitis res34: ankylosing_spondylitis diagnostic Read
M2y0200 Livedoid vasculitis res34: ankylosing_spondylitis diagnostic Read
M2y0X00 Vasculitis limited to skin, unspecified res34: ankylosing_spondylitis diagnostic Read
Myu7A00 [X]Other vasculitis limited to the skin res34: ankylosing_spondylitis diagnostic Read
Myu7G00 [X]Vasculitis limited to skin, unspecified res34: ankylosing_spondylitis diagnostic Read
N012.00 Arthropathy in Behcet's syndrome res34: ankylosing_spondylitis diagnostic Read
N012000 Arthropathy in Behcet's syndrome of unspecified site res34: ankylosing_spondylitis diagnostic Read
N012011 Behcet's syndrome arthropathy res34: ankylosing_spondylitis diagnostic Read
N012700 Arthropathy in Behcet's syndrome of the ankle and foot res34: ankylosing_spondylitis diagnostic Read
N012x00 Arthropathy in Behcet's syndrome of multiple sites res34: ankylosing_spondylitis diagnostic Read
N040N00 Rheumatoid vasculitis res34: ankylosing_spondylitis diagnostic Read
N045000 Juvenile ankylosing spondylitis res34: ankylosing_spondylitis diagnostic Read
N085.00 Ankylosis of joint res34: ankylosing_spondylitis diagnostic Read
N085000 Joint ankylosis of unspecified site res34: ankylosing_spondylitis diagnostic Read
N085100 Joint ankylosis of the shoulder region res34: ankylosing_spondylitis diagnostic Read
N085200 Joint ankylosis of the upper arm res34: ankylosing_spondylitis diagnostic Read
N085300 Joint ankylosis of the forearm res34: ankylosing_spondylitis diagnostic Read
N085400 Joint ankylosis of the hand res34: ankylosing_spondylitis diagnostic Read
N085500 Joint ankylosis of the pelvic region and thigh res34: ankylosing_spondylitis diagnostic Read
N085511 Hip joint ankylosis res34: ankylosing_spondylitis diagnostic Read
N085600 Joint ankylosis of the lower leg res34: ankylosing_spondylitis diagnostic Read
N085611 Knee joint ankylosis res34: ankylosing_spondylitis diagnostic Read
N085700 Joint ankylosis of the ankle and foot res34: ankylosing_spondylitis diagnostic Read
N085711 Ankle joint ankylosis res34: ankylosing_spondylitis diagnostic Read
N085800 Joint ankylosis of other specified site res34: ankylosing_spondylitis diagnostic Read
N085900 Ankylosis of multiple joints res34: ankylosing_spondylitis diagnostic Read
N085C00 Ankylosis of the elbow joint res34: ankylosing_spondylitis diagnostic Read
N085F00 Ankylosis of the wrist joint res34: ankylosing_spondylitis diagnostic Read
N085G00 Ankylosis of the 1st CMC joint res34: ankylosing_spondylitis diagnostic Read
N085K00 Ankylosis of PIP joint res34: ankylosing_spondylitis diagnostic Read
N085L00 Ankylosis of DIP joint res34: ankylosing_spondylitis diagnostic Read
N085M00 Ankylosis of the hip joint res34: ankylosing_spondylitis diagnostic Read
N085P00 Ankylosis of the knee joint res34: ankylosing_spondylitis diagnostic Read
N085Q00 Ankylosis of the ankle joint res34: ankylosing_spondylitis diagnostic Read
N085R00 Ankylosis of the subtalar joint res34: ankylosing_spondylitis diagnostic Read
N085S00 Ankylosis of other tarsal joint res34: ankylosing_spondylitis diagnostic Read
N085U00 Ankylosis of toe joint res34: ankylosing_spondylitis diagnostic Read
N085z00 Ankylosis of joint NOS res34: ankylosing_spondylitis diagnostic Read
N10..00 Inflammatory spondylopathies res34: ankylosing_spondylitis diagnostic Read
N100.00 Ankylosing spondylitis res34: ankylosing_spondylitis diagnostic Read
N100.11 Marie - Strumpell spondylitis res34: ankylosing_spondylitis diagnostic Read
N101.00 Spinal enthesopathy res34: ankylosing_spondylitis diagnostic Read
N102.00 Sacroiliitis NEC res34: ankylosing_spondylitis diagnostic Read
N10y.00 Other inflammatory spondylopathies res34: ankylosing_spondylitis diagnostic Read
N10y000 Inflammatory spondylopathies in diseases EC res34: ankylosing_spondylitis diagnostic Read
N10yz00 Other inflammatory spondylopathies NOS res34: ankylosing_spondylitis diagnostic Read
N10z.00 Spondylitis NOS res34: ankylosing_spondylitis diagnostic Read
N117.00 Ankylosing vertebral hyperostosis res34: ankylosing_spondylitis diagnostic Read
N146000 Lumbosacral ankylosis res34: ankylosing_spondylitis diagnostic Read
N146100 Sacroiliac ankylosis res34: ankylosing_spondylitis diagnostic Read
N146200 Sacral ankylosis NOS res34: ankylosing_spondylitis diagnostic Read
N148.00 Ankylosis/instability of cervical,thoracic or lumbar spine res34: ankylosing_spondylitis diagnostic Read
N148000 Atlanto-occipital ankylosis res34: ankylosing_spondylitis diagnostic Read
N148100 Atlanto-axial ankylosis res34: ankylosing_spondylitis diagnostic Read
N148200 Cervical spine ankylosis res34: ankylosing_spondylitis diagnostic Read
N148300 Cervico-thoracic ankylosis res34: ankylosing_spondylitis diagnostic Read
N148400 Thoracic spine ankylosis res34: ankylosing_spondylitis diagnostic Read
N148500 Thoraco-lumbar ankylosis res34: ankylosing_spondylitis diagnostic Read
N148600 Lumbar spine ankylosis res34: ankylosing_spondylitis diagnostic Read
N148700 Atlanto-occipital instability res34: ankylosing_spondylitis diagnostic Read
N148800 Atlanto-axial instability res34: ankylosing_spondylitis diagnostic Read
N148900 Cervical spine instability res34: ankylosing_spondylitis diagnostic Read
N148A00 Cervico-thoracic instability res34: ankylosing_spondylitis diagnostic Read
N148B00 Thoracic spine instability res34: ankylosing_spondylitis diagnostic Read
N148C00 Lumbar spine instability res34: ankylosing_spondylitis diagnostic Read
N14z.11 Ankylosis of spine NOS res34: ankylosing_spondylitis diagnostic Read
N200.00 Giant cell arteritis with polymyalgia rheumatica res34: ankylosing_spondylitis diagnostic Read
Nyu4100 [X]Other giant cell arteritis res34: ankylosing_spondylitis diagnostic Read

API

To Export Phenotype Details:

Format API
XML site_root/api/v1/public/phenotypes/PH595/version/1190/detail/?format=xml
JSON site_root/api/v1/public/phenotypes/PH595/version/1190/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of phenotype

details = get_phenotype_detail_by_version('PH595', '1190', api_client=client)

To Export Phenotype Code List:

Format API
XML site_root/api/v1/public/phenotypes/PH595/version/1190/export/codes/?format=xml
JSON site_root/api/v1/public/phenotypes/PH595/version/1190/export/codes/?format=json
CSV site_root/phenotypes/PH595/version/1190/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelists of phenotype

codelists = get_phenotype_code_list('PH595', '1190', api_client=client)

Version History

Version
ID
Name Owner Publish date
1190 Ankylosing Spondylitis ieuan.scanlon 2021-10-06 currently shown

Export - export all codes into a csv file/JSON/XML for the current phenotype version.

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