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Asthma

Siobhan Reilly, Ivan Olier, Claire Planner, Tim Doran, David Reeves, Darren M Ashcroft, Linda Gask, Evangelos Kontopantelis

Type
Disease or Syndrome
ID
PH623
Version ID
1246
Data Sources
Valid event data range
01/04/2000 - 31/03/2012
Sex
Male
Agreement Date
2015-12-15
Coding system
Read codes v2 OXMIS codes
Tags /Collections
ClinicalCodes Repository Phenotype Library

Definition

Objectives:

Little is known about the prevalence of comorbidity rates in people with severe mental illness (SMI) in UK primary care. We calculated the prevalence of SMI by UK country, English region and deprivation quintile, antipsychotic and antidepressant medication prescription rates for people with SMI, and prevalence rates of common comorbidities in people with SMI compared with people without SMI.

Design:

Retrospective cohort study from 2000 to 2012.

Setting:

627 general practices contributing to the Clinical Practice Research Datalink, a UK primary care database.

Participants:

Each identified case (346 551) was matched for age, sex and general practice with 5 randomly selected control cases (1 732 755) with no diagnosis of SMI in each yearly time point.

Outcome measures:

Prevalence rates were calculated for 16 conditions.

Publications

  • Siobhan Reilly, Ivan Olier, Claire Planner, Tim Doran, David Reeves, Darren M Ashcroft, Linda Gask, Evangelos Kontopantelis, Inequalities in physical comorbidity a longitudinal comparative cohort study of people with severe mental illness in the UK. BMJ Open, 5(e009010), 2015.

Clinical Code List

Rows: 40
Code Description Entity type Coding System (OXMIS Read) Category
173A.00 Exercise induced asthma res26: Asthma Read diagnostic
173c.00 Occupational asthma res26: Asthma Read diagnostic
173d.00 Work aggravated asthma res26: Asthma Read diagnostic
1780.00 Aspirin induced asthma res26: Asthma Read diagnostic
1O2..00 Asthma confirmed res26: Asthma Read diagnostic
663V000 Occasional asthma res26: Asthma Read diagnostic
663V100 Mild asthma res26: Asthma Read diagnostic
663V200 Moderate asthma res26: Asthma Read diagnostic
663V300 Severe asthma res26: Asthma Read diagnostic
663j.00 Asthma - currently active res26: Asthma Read diagnostic
H312000 Chronic asthmatic bronchitis res26: Asthma Read diagnostic
H33..00 Asthma res26: Asthma Read diagnostic
H33..11 Bronchial asthma res26: Asthma Read diagnostic
H330.00 Extrinsic (atopic) asthma res26: Asthma Read diagnostic
H330.11 Allergic asthma res26: Asthma Read diagnostic
H330.12 Childhood asthma res26: Asthma Read diagnostic
H330.13 Hay fever with asthma res26: Asthma Read diagnostic
H330.14 Pollen asthma res26: Asthma Read diagnostic
H330000 Extrinsic asthma without status asthmaticus res26: Asthma Read diagnostic
H330011 Hay fever with asthma res26: Asthma Read diagnostic
H330100 Extrinsic asthma with status asthmaticus res26: Asthma Read diagnostic
H330111 Extrinsic asthma with asthma attack res26: Asthma Read diagnostic
H330z00 Extrinsic asthma NOS res26: Asthma Read diagnostic
H331.00 Intrinsic asthma res26: Asthma Read diagnostic
H331.11 Late onset asthma res26: Asthma Read diagnostic
H331000 Intrinsic asthma without status asthmaticus res26: Asthma Read diagnostic
H331100 Intrinsic asthma with status asthmaticus res26: Asthma Read diagnostic
H331111 Intrinsic asthma with asthma attack res26: Asthma Read diagnostic
H331z00 Intrinsic asthma NOS res26: Asthma Read diagnostic
H332.00 Mixed asthma res26: Asthma Read diagnostic
H334.00 Brittle asthma res26: Asthma Read diagnostic
H33z.00 Asthma unspecified res26: Asthma Read diagnostic
H33z.11 Hyperreactive airways disease res26: Asthma Read diagnostic
H33z200 Late-onset asthma res26: Asthma Read diagnostic
H33zz00 Asthma NOS res26: Asthma Read diagnostic
H33zz11 Exercise induced asthma res26: Asthma Read diagnostic
H33zz12 Allergic asthma NEC res26: Asthma Read diagnostic
H35y600 Sequoiosis (red-cedar asthma) res26: Asthma Read diagnostic
H35y700 Wood asthma res26: Asthma Read diagnostic
H47y000 Detergent asthma res26: Asthma Read diagnostic
Rows: 23
Code Description Entity type Coding System (OXMIS Read) Category
3052AT PSYCHOGENIC ASTHMA res26: Asthma OXMIS diagnostic
493 ASTHMA res26: Asthma OXMIS diagnostic
493 AA ASTHMA ACUTE res26: Asthma OXMIS diagnostic
493 AB ASTHMA ATTACK res26: Asthma OXMIS diagnostic
493 AD ASTHMA OCCASIONAL res26: Asthma OXMIS diagnostic
493 AE ASTHMA SEASONAL res26: Asthma OXMIS diagnostic
493 AI ASTHMA SEVERITY MILD res26: Asthma OXMIS diagnostic
493 AJ ASTHMA SEVERITY MODERATE res26: Asthma OXMIS diagnostic
493 AK ASTHMA SEVERITY SEVERE res26: Asthma OXMIS diagnostic
493 BD ASTHMA AND BRONCHITIS res26: Asthma OXMIS diagnostic
493 BR BRONCHIAL ASTHMA res26: Asthma OXMIS diagnostic
493 C CROUP ASTHMATIC res26: Asthma OXMIS diagnostic
493 CH CHILDHOOD ASTHMA res26: Asthma OXMIS diagnostic
493 EA ASTHMA EXERCISE INCLUDED res26: Asthma OXMIS diagnostic
493 EB ASTHMA EXERCISE INDUCED res26: Asthma OXMIS diagnostic
493 EP ASTHMA EPISODIC res26: Asthma OXMIS diagnostic
493 GR ASTHMA ALLERGIC GRASS res26: Asthma OXMIS diagnostic
493 GS ASTHMA POLLEN INITIATED res26: Asthma OXMIS diagnostic
493 HT INTRINSIC ASTHMA res26: Asthma OXMIS diagnostic
493 JC CHRONIC ASTHMA res26: Asthma OXMIS diagnostic
493 NA NOCTURNAL ASTHMA res26: Asthma OXMIS diagnostic
691 TM ECZEMA WITH ASTHMA res26: Asthma OXMIS diagnostic
L4930LO LATE ONSET ASTHMA res26: Asthma OXMIS diagnostic

API

To Export Phenotype Details:

Format API
XML site_root/api/v1/public/phenotypes/PH623/version/1246/detail/?format=xml
JSON site_root/api/v1/public/phenotypes/PH623/version/1246/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of phenotype

details = get_phenotype_detail_by_version('PH623', '1246', api_client=client)

To Export Phenotype Code List:

Format API
XML site_root/api/v1/public/phenotypes/PH623/version/1246/export/codes/?format=xml
JSON site_root/api/v1/public/phenotypes/PH623/version/1246/export/codes/?format=json
CSV site_root/phenotypes/PH623/version/1246/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelists of phenotype

codelists = get_phenotype_code_list('PH623', '1246', api_client=client)

Version History

Version
ID
Name Owner Publish date
1246 Asthma ieuan.scanlon 2021-10-06 currently shown

Export - export all codes into a csv file/JSON/XML for the current phenotype version.

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