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Chronic Kidney Disease (CKD)

Siobhan Reilly, Ivan Olier, Claire Planner, Tim Doran, David Reeves, Darren M Ashcroft, Linda Gask, Evangelos Kontopantelis

Type
Disease or Syndrome
ID
PH626
Version ID
1252
Data Sources
Valid event data range
01/04/2000 - 31/03/2012
Sex
Male
Agreement Date
2015-12-15
Coding system
Read codes v2
Tags /Collections
ClinicalCodes Repository Phenotype Library

Definition

Objectives:

Little is known about the prevalence of comorbidity rates in people with severe mental illness (SMI) in UK primary care. We calculated the prevalence of SMI by UK country, English region and deprivation quintile, antipsychotic and antidepressant medication prescription rates for people with SMI, and prevalence rates of common comorbidities in people with SMI compared with people without SMI.

Design:

Retrospective cohort study from 2000 to 2012.

Setting:

627 general practices contributing to the Clinical Practice Research Datalink, a UK primary care database.

Participants:

Each identified case (346 551) was matched for age, sex and general practice with 5 randomly selected control cases (1 732 755) with no diagnosis of SMI in each yearly time point.

Outcome measures:

Prevalence rates were calculated for 16 conditions.

Publications

  • Siobhan Reilly, Ivan Olier, Claire Planner, Tim Doran, David Reeves, Darren M Ashcroft, Linda Gask, Evangelos Kontopantelis, Inequalities in physical comorbidity a longitudinal comparative cohort study of people with severe mental illness in the UK. BMJ Open, 5(e009010), 2015.

Clinical Code List

Rows: 74
Code Description Entity type Category Coding System (Read)
1Z12.00 Chronic kidney disease stage 3 res26: CKD diagnostic Read
1Z13.00 Chronic kidney disease stage 4 res26: CKD diagnostic Read
1Z14.00 Chronic kidney disease stage 5 res26: CKD diagnostic Read
1Z15.00 Chronic kidney disease stage 3A res26: CKD diagnostic Read
1Z16.00 Chronic kidney disease stage 3B res26: CKD diagnostic Read
1Z1B.00 Chronic kidney disease stage 3 with proteinuria res26: CKD diagnostic Read
1Z1C.00 Chronic kidney disease stage 3 without proteinuria res26: CKD diagnostic Read
1Z1D.00 Chronic kidney disease stage 3A with proteinuria res26: CKD diagnostic Read
1Z1E.00 Chronic kidney disease stage 3A without proteinuria res26: CKD diagnostic Read
1Z1F.00 Chronic kidney disease stage 3B with proteinuria res26: CKD diagnostic Read
1Z1G.00 Chronic kidney disease stage 3B without proteinuria res26: CKD diagnostic Read
1Z1H.00 Chronic kidney disease stage 4 with proteinuria res26: CKD diagnostic Read
1Z1J.00 Chronic kidney disease stage 4 without proteinuria res26: CKD diagnostic Read
1Z1K.00 Chronic kidney disease stage 5 with proteinuria res26: CKD diagnostic Read
1Z1L.00 Chronic kidney disease stage 5 without proteinuria res26: CKD diagnostic Read
7B06300 Exploration of renal transplant res26: CKD diagnostic Read
8L50.00 Renal transplant planned res26: CKD diagnostic Read
K01..00 Nephrotic syndrome res26: CKD diagnostic Read
K010.00 Nephrotic syndrome with proliferative glomerulonephritis res26: CKD diagnostic Read
K011.00 Nephrotic syndrome with membranous glomerulonephritis res26: CKD diagnostic Read
K012.00 Nephrotic syndrome+membranoproliferative glomerulonephritis res26: CKD diagnostic Read
K013.00 Nephrotic syndrome with minimal change glomerulonephritis res26: CKD diagnostic Read
K013.11 Lipoid nephrosis res26: CKD diagnostic Read
K013.12 Steroid sensitive nephrotic syndrome res26: CKD diagnostic Read
K014.00 Nephrotic syndrome, minor glomerular abnormality res26: CKD diagnostic Read
K015.00 Nephrotic syndrome, focal and segmental glomerular lesions res26: CKD diagnostic Read
K016.00 Nephrotic syndrome, diffuse membranous glomerulonephritis res26: CKD diagnostic Read
K017.00 Nephrotic syn difus mesangial prolifertiv glomerulonephritis res26: CKD diagnostic Read
K018.00 Nephrotic syn,difus endocapilary proliftv glomerulonephritis res26: CKD diagnostic Read
K019.00 Nephrotic syn,diffuse mesangiocapillary glomerulonephritis res26: CKD diagnostic Read
K01A.00 Nephrotic syndrome, dense deposit disease res26: CKD diagnostic Read
K01B.00 Nephrotic syndrome, diffuse crescentic glomerulonephritis res26: CKD diagnostic Read
K01w.00 Congenital nephrotic syndrome res26: CKD diagnostic Read
K01w000 Finnish nephrosis syndrome res26: CKD diagnostic Read
K01x000 Nephrotic syndrome in amyloidosis res26: CKD diagnostic Read
K01x100 Nephrotic syndrome in diabetes mellitus res26: CKD diagnostic Read
K01x111 Kimmelstiel - Wilson disease res26: CKD diagnostic Read
K01x200 Nephrotic syndrome in malaria res26: CKD diagnostic Read
K01x300 Nephrotic syndrome in polyarteritis nodosa res26: CKD diagnostic Read
K01x400 Nephrotic syndrome in systemic lupus erythematosus res26: CKD diagnostic Read
K01x411 Lupus nephritis res26: CKD diagnostic Read
K01y.00 Nephrotic syndrome with other pathological kidney lesions res26: CKD diagnostic Read
K01z.00 Nephrotic syndrome NOS res26: CKD diagnostic Read
K02..00 Chronic glomerulonephritis res26: CKD diagnostic Read
K02..11 Nephritis - chronic res26: CKD diagnostic Read
K02..12 Nephropathy - chronic res26: CKD diagnostic Read
K020.00 Chronic proliferative glomerulonephritis res26: CKD diagnostic Read
K021.00 Chronic membranous glomerulonephritis res26: CKD diagnostic Read
K022.00 Chronic membranoproliferative glomerulonephritis res26: CKD diagnostic Read
K023.00 Chronic rapidly progressive glomerulonephritis res26: CKD diagnostic Read
K02y.00 Other chronic glomerulonephritis res26: CKD diagnostic Read
K02y000 Chronic glomerulonephritis + diseases EC res26: CKD diagnostic Read
K02y200 Chronic focal glomerulonephritis res26: CKD diagnostic Read
K02y300 Chronic diffuse glomerulonephritis res26: CKD diagnostic Read
K02yz00 Other chronic glomerulonephritis NOS res26: CKD diagnostic Read
K02z.00 Chronic glomerulonephritis NOS res26: CKD diagnostic Read
K05..00 Chronic renal failure res26: CKD diagnostic Read
K05..11 Chronic uraemia res26: CKD diagnostic Read
K05..12 End stage renal failure res26: CKD diagnostic Read
K050.00 End stage renal failure res26: CKD diagnostic Read
K0D..00 End-stage renal disease res26: CKD diagnostic Read
K100.00 Chronic pyelonephritis res26: CKD diagnostic Read
K100000 Chronic pyelonephritis without medullary necrosis res26: CKD diagnostic Read
K100100 Chronic pyelonephritis with medullary necrosis res26: CKD diagnostic Read
K100200 Chronic pyelitis res26: CKD diagnostic Read
K100300 Chronic pyonephrosis res26: CKD diagnostic Read
K100400 Nonobstructive reflux-associated chronic pyelonephritis res26: CKD diagnostic Read
K100500 Chronic obstructive pyelonephritis res26: CKD diagnostic Read
K100600 Calculous pyelonephritis res26: CKD diagnostic Read
K100z00 Chronic pyelonephritis NOS res26: CKD diagnostic Read
SP08300 Kidney transplant failure and rejection res26: CKD diagnostic Read
TB00100 Kidney transplant with complication, without blame res26: CKD diagnostic Read
TB00111 Renal transplant with complication, without blame res26: CKD diagnostic Read
ZV42000 [V]Kidney transplanted res26: CKD diagnostic Read

API

To Export Phenotype Details:

Format API
XML site_root/api/v1/public/phenotypes/PH626/version/1252/detail/?format=xml
JSON site_root/api/v1/public/phenotypes/PH626/version/1252/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of phenotype

details = get_phenotype_detail_by_version('PH626', '1252', api_client=client)

To Export Phenotype Code List:

Format API
XML site_root/api/v1/public/phenotypes/PH626/version/1252/export/codes/?format=xml
JSON site_root/api/v1/public/phenotypes/PH626/version/1252/export/codes/?format=json
CSV site_root/phenotypes/PH626/version/1252/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelists of phenotype

codelists = get_phenotype_code_list('PH626', '1252', api_client=client)

Version History

Version
ID
Name Owner Publish date
1252 Chronic Kidney Disease (CKD) ieuan.scanlon 2021-10-06 currently shown

Export - export all codes into a csv file/JSON/XML for the current phenotype version.

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