Objectives:
Little is known about the prevalence of comorbidity rates in people with severe mental illness (SMI) in UK primary care. We calculated the prevalence of SMI by UK country, English region and deprivation quintile, antipsychotic and antidepressant medication prescription rates for people with SMI, and prevalence rates of common comorbidities in people with SMI compared with people without SMI.
Design:
Retrospective cohort study from 2000 to 2012.
Setting:
627 general practices contributing to the Clinical Practice Research Datalink, a UK primary care database.
Participants:
Each identified case (346 551) was matched for age, sex and general practice with 5 randomly selected control cases (1 732 755) with no diagnosis of SMI in each yearly time point.
Outcome measures:
Prevalence rates were calculated for 16 conditions.
Siobhan Reilly, Ivan Olier, Claire Planner, Tim Doran, David Reeves, Darren M Ashcroft, Linda Gask, Evangelos Kontopantelis, Inequalities in physical comorbidity a longitudinal comparative cohort study of people with severe mental illness in the UK. BMJ Open, 5(e009010), 2015.
| Code | Description | Entity type | Category | Coding System (Read) |
|---|---|---|---|---|
| 1Z12.00 | Chronic kidney disease stage 3 | res26: CKD | diagnostic | Read |
| 1Z13.00 | Chronic kidney disease stage 4 | res26: CKD | diagnostic | Read |
| 1Z14.00 | Chronic kidney disease stage 5 | res26: CKD | diagnostic | Read |
| 1Z15.00 | Chronic kidney disease stage 3A | res26: CKD | diagnostic | Read |
| 1Z16.00 | Chronic kidney disease stage 3B | res26: CKD | diagnostic | Read |
| 1Z1B.00 | Chronic kidney disease stage 3 with proteinuria | res26: CKD | diagnostic | Read |
| 1Z1C.00 | Chronic kidney disease stage 3 without proteinuria | res26: CKD | diagnostic | Read |
| 1Z1D.00 | Chronic kidney disease stage 3A with proteinuria | res26: CKD | diagnostic | Read |
| 1Z1E.00 | Chronic kidney disease stage 3A without proteinuria | res26: CKD | diagnostic | Read |
| 1Z1F.00 | Chronic kidney disease stage 3B with proteinuria | res26: CKD | diagnostic | Read |
| 1Z1G.00 | Chronic kidney disease stage 3B without proteinuria | res26: CKD | diagnostic | Read |
| 1Z1H.00 | Chronic kidney disease stage 4 with proteinuria | res26: CKD | diagnostic | Read |
| 1Z1J.00 | Chronic kidney disease stage 4 without proteinuria | res26: CKD | diagnostic | Read |
| 1Z1K.00 | Chronic kidney disease stage 5 with proteinuria | res26: CKD | diagnostic | Read |
| 1Z1L.00 | Chronic kidney disease stage 5 without proteinuria | res26: CKD | diagnostic | Read |
| 7B06300 | Exploration of renal transplant | res26: CKD | diagnostic | Read |
| 8L50.00 | Renal transplant planned | res26: CKD | diagnostic | Read |
| K01..00 | Nephrotic syndrome | res26: CKD | diagnostic | Read |
| K010.00 | Nephrotic syndrome with proliferative glomerulonephritis | res26: CKD | diagnostic | Read |
| K011.00 | Nephrotic syndrome with membranous glomerulonephritis | res26: CKD | diagnostic | Read |
| K012.00 | Nephrotic syndrome+membranoproliferative glomerulonephritis | res26: CKD | diagnostic | Read |
| K013.00 | Nephrotic syndrome with minimal change glomerulonephritis | res26: CKD | diagnostic | Read |
| K013.11 | Lipoid nephrosis | res26: CKD | diagnostic | Read |
| K013.12 | Steroid sensitive nephrotic syndrome | res26: CKD | diagnostic | Read |
| K014.00 | Nephrotic syndrome, minor glomerular abnormality | res26: CKD | diagnostic | Read |
| K015.00 | Nephrotic syndrome, focal and segmental glomerular lesions | res26: CKD | diagnostic | Read |
| K016.00 | Nephrotic syndrome, diffuse membranous glomerulonephritis | res26: CKD | diagnostic | Read |
| K017.00 | Nephrotic syn difus mesangial prolifertiv glomerulonephritis | res26: CKD | diagnostic | Read |
| K018.00 | Nephrotic syn,difus endocapilary proliftv glomerulonephritis | res26: CKD | diagnostic | Read |
| K019.00 | Nephrotic syn,diffuse mesangiocapillary glomerulonephritis | res26: CKD | diagnostic | Read |
| K01A.00 | Nephrotic syndrome, dense deposit disease | res26: CKD | diagnostic | Read |
| K01B.00 | Nephrotic syndrome, diffuse crescentic glomerulonephritis | res26: CKD | diagnostic | Read |
| K01w.00 | Congenital nephrotic syndrome | res26: CKD | diagnostic | Read |
| K01w000 | Finnish nephrosis syndrome | res26: CKD | diagnostic | Read |
| K01x000 | Nephrotic syndrome in amyloidosis | res26: CKD | diagnostic | Read |
| K01x100 | Nephrotic syndrome in diabetes mellitus | res26: CKD | diagnostic | Read |
| K01x111 | Kimmelstiel - Wilson disease | res26: CKD | diagnostic | Read |
| K01x200 | Nephrotic syndrome in malaria | res26: CKD | diagnostic | Read |
| K01x300 | Nephrotic syndrome in polyarteritis nodosa | res26: CKD | diagnostic | Read |
| K01x400 | Nephrotic syndrome in systemic lupus erythematosus | res26: CKD | diagnostic | Read |
| K01x411 | Lupus nephritis | res26: CKD | diagnostic | Read |
| K01y.00 | Nephrotic syndrome with other pathological kidney lesions | res26: CKD | diagnostic | Read |
| K01z.00 | Nephrotic syndrome NOS | res26: CKD | diagnostic | Read |
| K02..00 | Chronic glomerulonephritis | res26: CKD | diagnostic | Read |
| K02..11 | Nephritis - chronic | res26: CKD | diagnostic | Read |
| K02..12 | Nephropathy - chronic | res26: CKD | diagnostic | Read |
| K020.00 | Chronic proliferative glomerulonephritis | res26: CKD | diagnostic | Read |
| K021.00 | Chronic membranous glomerulonephritis | res26: CKD | diagnostic | Read |
| K022.00 | Chronic membranoproliferative glomerulonephritis | res26: CKD | diagnostic | Read |
| K023.00 | Chronic rapidly progressive glomerulonephritis | res26: CKD | diagnostic | Read |
| K02y.00 | Other chronic glomerulonephritis | res26: CKD | diagnostic | Read |
| K02y000 | Chronic glomerulonephritis + diseases EC | res26: CKD | diagnostic | Read |
| K02y200 | Chronic focal glomerulonephritis | res26: CKD | diagnostic | Read |
| K02y300 | Chronic diffuse glomerulonephritis | res26: CKD | diagnostic | Read |
| K02yz00 | Other chronic glomerulonephritis NOS | res26: CKD | diagnostic | Read |
| K02z.00 | Chronic glomerulonephritis NOS | res26: CKD | diagnostic | Read |
| K05..00 | Chronic renal failure | res26: CKD | diagnostic | Read |
| K05..11 | Chronic uraemia | res26: CKD | diagnostic | Read |
| K05..12 | End stage renal failure | res26: CKD | diagnostic | Read |
| K050.00 | End stage renal failure | res26: CKD | diagnostic | Read |
| K0D..00 | End-stage renal disease | res26: CKD | diagnostic | Read |
| K100.00 | Chronic pyelonephritis | res26: CKD | diagnostic | Read |
| K100000 | Chronic pyelonephritis without medullary necrosis | res26: CKD | diagnostic | Read |
| K100100 | Chronic pyelonephritis with medullary necrosis | res26: CKD | diagnostic | Read |
| K100200 | Chronic pyelitis | res26: CKD | diagnostic | Read |
| K100300 | Chronic pyonephrosis | res26: CKD | diagnostic | Read |
| K100400 | Nonobstructive reflux-associated chronic pyelonephritis | res26: CKD | diagnostic | Read |
| K100500 | Chronic obstructive pyelonephritis | res26: CKD | diagnostic | Read |
| K100600 | Calculous pyelonephritis | res26: CKD | diagnostic | Read |
| K100z00 | Chronic pyelonephritis NOS | res26: CKD | diagnostic | Read |
| SP08300 | Kidney transplant failure and rejection | res26: CKD | diagnostic | Read |
| TB00100 | Kidney transplant with complication, without blame | res26: CKD | diagnostic | Read |
| TB00111 | Renal transplant with complication, without blame | res26: CKD | diagnostic | Read |
| ZV42000 | [V]Kidney transplanted | res26: CKD | diagnostic | Read |
To Export Phenotype Details:
| Format | API |
|---|---|
| XML | site_root/api/v1/public/phenotypes/PH626/version/1252/detail/?format=xml |
| JSON | site_root/api/v1/public/phenotypes/PH626/version/1252/detail/?format=json |
| R Package |
|
To Export Phenotype Code List:
| Format | API |
|---|---|
| XML | site_root/api/v1/public/phenotypes/PH626/version/1252/export/codes/?format=xml |
| JSON | site_root/api/v1/public/phenotypes/PH626/version/1252/export/codes/?format=json |
| CSV | site_root/phenotypes/PH626/version/1252/export/codes/ |
| R Package |
|
| Version ID |
Name | Owner | Publish date | |
|---|---|---|---|---|
| 1252 | Chronic Kidney Disease (CKD) | ieuan.scanlon | 2021-10-06 | currently shown |
Export - export all codes into a csv file/JSON/XML for the current phenotype version.
Print - Print page.