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Multiple sclerosis

Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A

Type
Disease or Syndrome
ID
PH63
Version ID
126
Valid event data range
01/01/1999 - 01/07/2016
Sex
Female, Male
Agreement Date
2019-05-20
Coding system
Read codes v2 ICD10 codes Med codes
Tags /Collections
CALIBER Phenotype Library

Definition

At the specified date, a patient is defined as having had 'Multiple sclerosis' IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:

Primary care

  1. 'Multiple sclerosis' diagnosis or history of diagnosis during a consultation

OR Secondary care

  1. ALL diagnoses of 'Multiple sclerosis' or history of diagnosis during a hospitalization

Implementation


Publications

  • Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3

Clinical Code List

Rows: 23
Code Description Disease Medcode Category
666A.00 Multiple sclerosis review Multiple sclerosis 44985.0 History of Multiple sclerosis
666B.00 Multiple sclerosis multidisciplinary review Multiple sclerosis 43232.0 History of Multiple sclerosis
8CS1.00 Multiple sclerosis care plan agreed Multiple sclerosis 50161.0 History of Multiple sclerosis
8Cc0.00 Management of multiple sclerosis in onset phase Multiple sclerosis 98835.0 Diagnosis of Multiple sclerosis
8Cc1.00 Management of multiple sclerosis in early disease phase Multiple sclerosis 97487.0 Diagnosis of Multiple sclerosis
8Cc2.00 Management of multiple sclerosis in stable disability phase Multiple sclerosis 95864.0 History of Multiple sclerosis
8Cc4.00 Management of multiple sclerosis in palliative phase Multiple sclerosis 98521.0 History of Multiple sclerosis
8IAb.00 Multiple sclerosis review declined Multiple sclerosis 100503.0 History of Multiple sclerosis
9kG..00 Spec serv for pat with multiple sclerosis - enh serv admin Multiple sclerosis 48527.0 History of Multiple sclerosis
9mD..00 Multiple sclerosis monitoring administration Multiple sclerosis 106307.0 History of Multiple sclerosis
9mD0.00 Multiple sclerosis monitoring first letter Multiple sclerosis 109049.0 History of Multiple sclerosis
9mD1.00 Multiple sclerosis monitoring second letter Multiple sclerosis 109302.0 History of Multiple sclerosis
F20..00 Multiple sclerosis Multiple sclerosis 684.0 Diagnosis of Multiple sclerosis
F20..11 Disseminated sclerosis Multiple sclerosis 3440.0 Diagnosis of Multiple sclerosis
F200.00 Multiple sclerosis of the brain stem Multiple sclerosis 40344.0 Diagnosis of Multiple sclerosis
F201.00 Multiple sclerosis of the spinal cord Multiple sclerosis 69886.0 Diagnosis of Multiple sclerosis
F202.00 Generalised multiple sclerosis Multiple sclerosis 23730.0 Diagnosis of Multiple sclerosis
F203.00 Exacerbation of multiple sclerosis Multiple sclerosis 2298.0 History of Multiple sclerosis
F204.00 Benign multiple sclerosis Multiple sclerosis 96291.0 Diagnosis of Multiple sclerosis
F206.00 Primary progressive multiple sclerosis Multiple sclerosis 96607.0 Diagnosis of Multiple sclerosis
F207.00 Relapsing and remitting multiple sclerosis Multiple sclerosis 95972.0 Diagnosis of Multiple sclerosis
F208.00 Secondary progressive multiple sclerosis Multiple sclerosis 96246.0 Diagnosis of Multiple sclerosis
F20z.00 Multiple sclerosis NOS Multiple sclerosis 20493.0 Diagnosis of Multiple sclerosis
Rows: 23
Code Description Disease ReadcodeDescr Readcode
100503.0 History of Multiple sclerosis Multiple sclerosis Multiple sclerosis review declined 8IAb.00
106307.0 History of Multiple sclerosis Multiple sclerosis Multiple sclerosis monitoring administration 9mD..00
109049.0 History of Multiple sclerosis Multiple sclerosis Multiple sclerosis monitoring first letter 9mD0.00
109302.0 History of Multiple sclerosis Multiple sclerosis Multiple sclerosis monitoring second letter 9mD1.00
20493.0 Diagnosis of Multiple sclerosis Multiple sclerosis Multiple sclerosis NOS F20z.00
2298.0 History of Multiple sclerosis Multiple sclerosis Exacerbation of multiple sclerosis F203.00
23730.0 Diagnosis of Multiple sclerosis Multiple sclerosis Generalised multiple sclerosis F202.00
3440.0 Diagnosis of Multiple sclerosis Multiple sclerosis Disseminated sclerosis F20..11
40344.0 Diagnosis of Multiple sclerosis Multiple sclerosis Multiple sclerosis of the brain stem F200.00
43232.0 History of Multiple sclerosis Multiple sclerosis Multiple sclerosis multidisciplinary review 666B.00
44985.0 History of Multiple sclerosis Multiple sclerosis Multiple sclerosis review 666A.00
48527.0 History of Multiple sclerosis Multiple sclerosis Spec serv for pat with multiple sclerosis - enh serv admin 9kG..00
50161.0 History of Multiple sclerosis Multiple sclerosis Multiple sclerosis care plan agreed 8CS1.00
684.0 Diagnosis of Multiple sclerosis Multiple sclerosis Multiple sclerosis F20..00
69886.0 Diagnosis of Multiple sclerosis Multiple sclerosis Multiple sclerosis of the spinal cord F201.00
95864.0 History of Multiple sclerosis Multiple sclerosis Management of multiple sclerosis in stable disability phase 8Cc2.00
95972.0 Diagnosis of Multiple sclerosis Multiple sclerosis Relapsing and remitting multiple sclerosis F207.00
96246.0 Diagnosis of Multiple sclerosis Multiple sclerosis Secondary progressive multiple sclerosis F208.00
96291.0 Diagnosis of Multiple sclerosis Multiple sclerosis Benign multiple sclerosis F204.00
96607.0 Diagnosis of Multiple sclerosis Multiple sclerosis Primary progressive multiple sclerosis F206.00
97487.0 Diagnosis of Multiple sclerosis Multiple sclerosis Management of multiple sclerosis in early disease phase 8Cc1.00
98521.0 History of Multiple sclerosis Multiple sclerosis Management of multiple sclerosis in palliative phase 8Cc4.00
98835.0 Diagnosis of Multiple sclerosis Multiple sclerosis Management of multiple sclerosis in onset phase 8Cc0.00
Rows: 1
Code Description Disease Category
G35 Multiple sclerosis Multiple sclerosis Diagnosis of Multiple sclerosis

API

To Export Phenotype Details:

Format API
XML site_root/api/v1/public/phenotypes/PH63/version/126/detail/?format=xml
JSON site_root/api/v1/public/phenotypes/PH63/version/126/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of phenotype

details = get_phenotype_detail_by_version('PH63', '126', api_client=client)

To Export Phenotype Code List:

Format API
XML site_root/api/v1/public/phenotypes/PH63/version/126/export/codes/?format=xml
JSON site_root/api/v1/public/phenotypes/PH63/version/126/export/codes/?format=json
CSV site_root/phenotypes/PH63/version/126/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelists of phenotype

codelists = get_phenotype_code_list('PH63', '126', api_client=client)

Version History

Version
ID
Name Owner Publish date
126 Multiple sclerosis ieuan.scanlon 2021-10-06 currently shown

Export - export all codes into a csv file/JSON/XML for the current phenotype version.

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