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Learning Disability

Siobhan Reilly, Ivan Olier, Claire Planner, Tim Doran, David Reeves, Darren M Ashcroft, Linda Gask, Evangelos Kontopantelis

Type
Disease or Syndrome
ID
PH634
Version ID
1268
Data Sources
Valid event data range
01/04/2000 - 31/03/2012
Sex
Male
Agreement Date
2015-12-15
Coding system
Read codes v2 OXMIS codes
Tags /Collections
ClinicalCodes Repository Phenotype Library

Definition

Objectives:

Little is known about the prevalence of comorbidity rates in people with severe mental illness (SMI) in UK primary care. We calculated the prevalence of SMI by UK country, English region and deprivation quintile, antipsychotic and antidepressant medication prescription rates for people with SMI, and prevalence rates of common comorbidities in people with SMI compared with people without SMI.

Design:

Retrospective cohort study from 2000 to 2012.

Setting:

627 general practices contributing to the Clinical Practice Research Datalink, a UK primary care database.

Participants:

Each identified case (346 551) was matched for age, sex and general practice with 5 randomly selected control cases (1 732 755) with no diagnosis of SMI in each yearly time point.

Outcome measures:

Prevalence rates were calculated for 16 conditions.

Publications

  • Siobhan Reilly, Ivan Olier, Claire Planner, Tim Doran, David Reeves, Darren M Ashcroft, Linda Gask, Evangelos Kontopantelis, Inequalities in physical comorbidity a longitudinal comparative cohort study of people with severe mental illness in the UK. BMJ Open, 5(e009010), 2015.

Clinical Code List

Rows: 36
Code Description Entity type Coding System (OXMIS Read) Category
13Z4E00 Learning difficulties res26: LearningDis Read diagnostic
E2F2.00 Other specific learning difficulty res26: LearningDis Read diagnostic
E3...00 Mental retardation res26: LearningDis Read diagnostic
E30..00 Mild mental retardation, IQ in range 50-70 res26: LearningDis Read diagnostic
E31..00 Other specified mental retardation res26: LearningDis Read diagnostic
E310.00 Moderate mental retardation, IQ in range 35-49 res26: LearningDis Read diagnostic
E311.00 Severe mental retardation, IQ in range 20-34 res26: LearningDis Read diagnostic
E312.00 Profound mental retardation with IQ less than 20 res26: LearningDis Read diagnostic
E31z.00 Other specified mental retardation NOS res26: LearningDis Read diagnostic
E3y..00 Other specified mental retardation res26: LearningDis Read diagnostic
E3z..00 Mental retardation NOS res26: LearningDis Read diagnostic
Eu7..00 [X]Mental retardation res26: LearningDis Read diagnostic
Eu70.00 [X]Mild mental retardation res26: LearningDis Read diagnostic
Eu70y00 [X]Mild mental retardation, other impairments of behaviour res26: LearningDis Read diagnostic
Eu70z00 [X]Mild mental retardation without mention impairment behav res26: LearningDis Read diagnostic
Eu71.00 [X]Moderate mental retardation res26: LearningDis Read diagnostic
Eu71z00 [X]Mod mental retardation without mention impairment behav res26: LearningDis Read diagnostic
Eu72.00 [X]Severe mental retardation res26: LearningDis Read diagnostic
Eu72y00 [X]Severe mental retardation, other impairments of behaviour res26: LearningDis Read diagnostic
Eu72z00 [X]Sev mental retardation without mention impairment behav res26: LearningDis Read diagnostic
Eu73.00 [X]Profound mental retardation res26: LearningDis Read diagnostic
Eu73y00 [X]Profound mental retardation, other impairments of behavr res26: LearningDis Read diagnostic
Eu73z00 [X]Prfnd mental retardation without mention impairment behav res26: LearningDis Read diagnostic
Eu7y.00 [X]Other mental retardation res26: LearningDis Read diagnostic
Eu7yy00 [X]Other mental retardation, other impairments of behaviour res26: LearningDis Read diagnostic
Eu7yz00 [X]Other mental retardation without mention impairment behav res26: LearningDis Read diagnostic
Eu7z.00 [X]Unspecified mental retardation res26: LearningDis Read diagnostic
Eu7zz00 [X]Unsp mental retardation without mention impairment behav res26: LearningDis Read diagnostic
Eu81.00 [X]Specific developmental disorders of scholastic skills res26: LearningDis Read diagnostic
Eu81y00 [X]Other developmental disorders of scholastic skills res26: LearningDis Read diagnostic
Eu81z00 [X]Developmental disorder of scholastic skills, unspecified res26: LearningDis Read diagnostic
Eu81z11 [X]Learning disability NOS res26: LearningDis Read diagnostic
Eu84112 [X]Mental retardation with autistic features res26: LearningDis Read diagnostic
Z7CD200 Learning difficulties res26: LearningDis Read diagnostic
ZS34.00 Developmental disorder of scholastic skill res26: LearningDis Read diagnostic
ZS34.11 Learning disability res26: LearningDis Read diagnostic
Rows: 6
Code Description Entity type Coding System (OXMIS Read) Category
3061LF LEARNING DIFFICULTY res26: LearningDis OXMIS diagnostic
311 MENTAL RETARDATION MILD res26: LearningDis OXMIS diagnostic
312 MENTAL RETARDATION MODERATE res26: LearningDis OXMIS diagnostic
313 MENTAL RETARDATION SEVERE res26: LearningDis OXMIS diagnostic
315 RETARDATION MENTAL res26: LearningDis OXMIS diagnostic
315 HC MENTAL HANDICAP res26: LearningDis OXMIS diagnostic

API

To Export Phenotype Details:

Format API
XML site_root/api/v1/public/phenotypes/PH634/version/1268/detail/?format=xml
JSON site_root/api/v1/public/phenotypes/PH634/version/1268/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of phenotype

details = get_phenotype_detail_by_version('PH634', '1268', api_client=client)

To Export Phenotype Code List:

Format API
XML site_root/api/v1/public/phenotypes/PH634/version/1268/export/codes/?format=xml
JSON site_root/api/v1/public/phenotypes/PH634/version/1268/export/codes/?format=json
CSV site_root/phenotypes/PH634/version/1268/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelists of phenotype

codelists = get_phenotype_code_list('PH634', '1268', api_client=client)

Version History

Version
ID
Name Owner Publish date
1268 Learning Disability ieuan.scanlon 2021-10-06 currently shown

Export - export all codes into a csv file/JSON/XML for the current phenotype version.

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