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Stroke

Siobhan Reilly, Ivan Olier, Claire Planner, Tim Doran, David Reeves, Darren M Ashcroft, Linda Gask, Evangelos Kontopantelis

Type
Disease or Syndrome
ID
PH639
Version ID
1278
Data Sources
Valid event data range
01/04/2000 - 31/03/2012
Sex
Male
Agreement Date
2015-12-15
Coding system
Read codes v2 OXMIS codes
Tags /Collections
ClinicalCodes Repository Phenotype Library

Definition

Objectives:

Little is known about the prevalence of comorbidity rates in people with severe mental illness (SMI) in UK primary care. We calculated the prevalence of SMI by UK country, English region and deprivation quintile, antipsychotic and antidepressant medication prescription rates for people with SMI, and prevalence rates of common comorbidities in people with SMI compared with people without SMI.

Design:

Retrospective cohort study from 2000 to 2012.

Setting:

627 general practices contributing to the Clinical Practice Research Datalink, a UK primary care database.

Participants:

Each identified case (346 551) was matched for age, sex and general practice with 5 randomly selected control cases (1 732 755) with no diagnosis of SMI in each yearly time point.

Outcome measures:

Prevalence rates were calculated for 16 conditions.

Publications

  • Siobhan Reilly, Ivan Olier, Claire Planner, Tim Doran, David Reeves, Darren M Ashcroft, Linda Gask, Evangelos Kontopantelis, Inequalities in physical comorbidity a longitudinal comparative cohort study of people with severe mental illness in the UK. BMJ Open, 5(e009010), 2015.

Clinical Code List

Rows: 75
Code Description Entity type Coding System (OXMIS Read) Category
G61..00 Intracerebral haemorrhage res26: Stroke Read diagnostic
G61..11 CVA - cerebrovascular accid due to intracerebral haemorrhage res26: Stroke Read diagnostic
G61..12 Stroke due to intracerebral haemorrhage res26: Stroke Read diagnostic
G610.00 Cortical haemorrhage res26: Stroke Read diagnostic
G611.00 Internal capsule haemorrhage res26: Stroke Read diagnostic
G612.00 Basal nucleus haemorrhage res26: Stroke Read diagnostic
G613.00 Cerebellar haemorrhage res26: Stroke Read diagnostic
G614.00 Pontine haemorrhage res26: Stroke Read diagnostic
G615.00 Bulbar haemorrhage res26: Stroke Read diagnostic
G616.00 External capsule haemorrhage res26: Stroke Read diagnostic
G618.00 Intracerebral haemorrhage, multiple localized res26: Stroke Read diagnostic
G61X.00 Intracerebral haemorrhage in hemisphere, unspecified res26: Stroke Read diagnostic
G61X000 Left sided intracerebral haemorrhage, unspecified res26: Stroke Read diagnostic
G61X100 Right sided intracerebral haemorrhage, unspecified res26: Stroke Read diagnostic
G61z.00 Intracerebral haemorrhage NOS res26: Stroke Read diagnostic
G63y000 Cerebral infarct due to thrombosis of precerebral arteries res26: Stroke Read diagnostic
G63y100 Cerebral infarction due to embolism of precerebral arteries res26: Stroke Read diagnostic
G64..00 Cerebral arterial occlusion res26: Stroke Read diagnostic
G64..11 CVA - cerebral artery occlusion res26: Stroke Read diagnostic
G64..12 Infarction - cerebral res26: Stroke Read diagnostic
G64..13 Stroke due to cerebral arterial occlusion res26: Stroke Read diagnostic
G640.00 Cerebral thrombosis res26: Stroke Read diagnostic
G640000 Cerebral infarction due to thrombosis of cerebral arteries res26: Stroke Read diagnostic
G641.00 Cerebral embolism res26: Stroke Read diagnostic
G641.11 Cerebral embolus res26: Stroke Read diagnostic
G641000 Cerebral infarction due to embolism of cerebral arteries res26: Stroke Read diagnostic
G64z.00 Cerebral infarction NOS res26: Stroke Read diagnostic
G64z.11 Brainstem infarction NOS res26: Stroke Read diagnostic
G64z.12 Cerebellar infarction res26: Stroke Read diagnostic
G64z000 Brainstem infarction res26: Stroke Read diagnostic
G64z100 Wallenberg syndrome res26: Stroke Read diagnostic
G64z111 Lateral medullary syndrome res26: Stroke Read diagnostic
G64z200 Left sided cerebral infarction res26: Stroke Read diagnostic
G64z300 Right sided cerebral infarction res26: Stroke Read diagnostic
G64z400 Infarction of basal ganglia res26: Stroke Read diagnostic
G65..00 Transient cerebral ischaemia res26: Stroke Read diagnostic
G65..11 Drop attack res26: Stroke Read diagnostic
G65..12 Transient ischaemic attack res26: Stroke Read diagnostic
G65..13 Vertebro-basilar insufficiency res26: Stroke Read diagnostic
G650.00 Basilar artery syndrome res26: Stroke Read diagnostic
G650.11 Insufficiency - basilar artery res26: Stroke Read diagnostic
G651.00 Vertebral artery syndrome res26: Stroke Read diagnostic
G651000 Vertebro-basilar artery syndrome res26: Stroke Read diagnostic
G652.00 Subclavian steal syndrome res26: Stroke Read diagnostic
G653.00 Carotid artery syndrome hemispheric res26: Stroke Read diagnostic
G654.00 Multiple and bilateral precerebral artery syndromes res26: Stroke Read diagnostic
G656.00 Vertebrobasilar insufficiency res26: Stroke Read diagnostic
G65y.00 Other transient cerebral ischaemia res26: Stroke Read diagnostic
G65z.00 Transient cerebral ischaemia NOS res26: Stroke Read diagnostic
G65z000 Impending cerebral ischaemia res26: Stroke Read diagnostic
G65z100 Intermittent cerebral ischaemia res26: Stroke Read diagnostic
G65zz00 Transient cerebral ischaemia NOS res26: Stroke Read diagnostic
G66..00 Stroke and cerebrovascular accident unspecified res26: Stroke Read diagnostic
G66..11 CVA unspecified res26: Stroke Read diagnostic
G66..12 Stroke unspecified res26: Stroke Read diagnostic
G66..13 CVA - Cerebrovascular accident unspecified res26: Stroke Read diagnostic
G660.00 Middle cerebral artery syndrome res26: Stroke Read diagnostic
G661.00 Anterior cerebral artery syndrome res26: Stroke Read diagnostic
G662.00 Posterior cerebral artery syndrome res26: Stroke Read diagnostic
G663.00 Brain stem stroke syndrome res26: Stroke Read diagnostic
G664.00 Cerebellar stroke syndrome res26: Stroke Read diagnostic
G665.00 Pure motor lacunar syndrome res26: Stroke Read diagnostic
G666.00 Pure sensory lacunar syndrome res26: Stroke Read diagnostic
G667.00 Left sided CVA res26: Stroke Read diagnostic
G668.00 Right sided CVA res26: Stroke Read diagnostic
G6W..00 Cereb infarct due unsp occlus/stenos precerebr arteries res26: Stroke Read diagnostic
G6X..00 Cerebrl infarctn due/unspcf occlusn or sten/cerebrl artrs res26: Stroke Read diagnostic
Gyu6200 [X]Other intracerebral haemorrhage res26: Stroke Read diagnostic
Gyu6300 [X]Cerebrl infarctn due/unspcf occlusn or sten/cerebrl artrs res26: Stroke Read diagnostic
Gyu6400 [X]Other cerebral infarction res26: Stroke Read diagnostic
Gyu6500 [X]Occlusion and stenosis of other precerebral arteries res26: Stroke Read diagnostic
Gyu6600 [X]Occlusion and stenosis of other cerebral arteries res26: Stroke Read diagnostic
Gyu6G00 [X]Cereb infarct due unsp occlus/stenos precerebr arteries res26: Stroke Read diagnostic
L440.11 CVA - cerebrovascular accident in the puerperium res26: Stroke Read diagnostic
L440.12 Stroke in the puerperium res26: Stroke Read diagnostic
Rows: 9
Code Description Entity type Coding System (OXMIS Read) Category
4350AT TRANSIENT ISCHAEMIC ATTACKS WITH HYPERTE res26: Stroke OXMIS diagnostic
4359AT TRANSIENT ISCHAEMIC ATTACKS res26: Stroke OXMIS diagnostic
4360A CEREBROVASCULAR ACCIDENT WITH HYPERTENSI res26: Stroke OXMIS diagnostic
4360B STROKE WITH HYPERTENSION res26: Stroke OXMIS diagnostic
4369A CVA (CEREBROVASCULAR ACCIDENT) res26: Stroke OXMIS diagnostic
4369AL CEREBROVASCULAR ACCIDENT LEFT res26: Stroke OXMIS diagnostic
4369AR CEREBROVASCULAR ACCIDENT RIGHT res26: Stroke OXMIS diagnostic
4369B STROKE res26: Stroke OXMIS diagnostic
4369BN SYNDROME STROKE res26: Stroke OXMIS diagnostic

API

To Export Phenotype Details:

Format API
XML site_root/api/v1/public/phenotypes/PH639/version/1278/detail/?format=xml
JSON site_root/api/v1/public/phenotypes/PH639/version/1278/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of phenotype

details = get_phenotype_detail_by_version('PH639', '1278', api_client=client)

To Export Phenotype Code List:

Format API
XML site_root/api/v1/public/phenotypes/PH639/version/1278/export/codes/?format=xml
JSON site_root/api/v1/public/phenotypes/PH639/version/1278/export/codes/?format=json
CSV site_root/phenotypes/PH639/version/1278/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelists of phenotype

codelists = get_phenotype_code_list('PH639', '1278', api_client=client)

Version History

Version
ID
Name Owner Publish date
1278 Stroke ieuan.scanlon 2021-10-06 currently shown

Export - export all codes into a csv file/JSON/XML for the current phenotype version.

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