Phenotype Library | phenotype: Psoriatic arthropathy

Psoriatic arthropathy

Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A

PH75

Version ID

150

Type

Disease or Syndrome

Data Sources

CPRD GOLD , HES Admitted Patient Care data for CPRD GOLD

Valid event data range

01/01/1999 - 01/07/2016

Sex

♀ Female ♂ Male

Agreement Date

2019-05-20

Coding system

Read codes v2 ICD10 codes Med codes

Collections

CALIBER Phenotype Library

Definition

At the specified date, a patient is defined as having had Psoriatic arthropathy IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:

Primary care

Psoriatic arthropathy diagnosis or history of diagnosis during a consultation

OR Secondary care (ICD10)

ALL diagnoses of Psoriatic arthropathy or history of diagnosis during a hospitalization

Implementation

PhenoFlow Implementation:

https://kclhi.org/phenoflow/phenotype/download/220

Publications

Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3

Clinical Code List

CSV

JSON

XML

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C890/2919 Psoriatic arthropathy - Primary care - Read codes v2

Rows: 7

Code	Description	Disease	Medcode	Category
M160.00	Psoriatic arthropathy	Psoriatic arthropathy	476.0	Diagnosis of Psoriatic arthropathy
M160.11	Psoriatic arthritis	Psoriatic arthropathy	96880.0	Diagnosis of Psoriatic arthropathy
M160000	Psoriasis spondylitica	Psoriatic arthropathy	26368.0	Diagnosis of Psoriatic arthropathy
M160100	Distal interphalangeal psoriatic arthropathy	Psoriatic arthropathy	32149.0	Diagnosis of Psoriatic arthropathy
M160200	Arthritis mutilans	Psoriatic arthropathy	21503.0	Diagnosis of Psoriatic arthropathy
M160z00	Psoriatic arthropathy NOS	Psoriatic arthropathy	12500.0	Diagnosis of Psoriatic arthropathy
Nyu1300	[X]Other psoriatic arthropathies	Psoriatic arthropathy	59107.0	Diagnosis of Psoriatic arthropathy

C891/2921 Psoriatic arthropathy - Primary care - Med codes

Rows: 7

Code	Description	Disease	ReadcodeDescr	Readcode
12500.0	Diagnosis of Psoriatic arthropathy	Psoriatic arthropathy	Psoriatic arthropathy NOS	M160z00
21503.0	Diagnosis of Psoriatic arthropathy	Psoriatic arthropathy	Arthritis mutilans	M160200
26368.0	Diagnosis of Psoriatic arthropathy	Psoriatic arthropathy	Psoriasis spondylitica	M160000
32149.0	Diagnosis of Psoriatic arthropathy	Psoriatic arthropathy	Distal interphalangeal psoriatic arthropathy	M160100
476.0	Diagnosis of Psoriatic arthropathy	Psoriatic arthropathy	Psoriatic arthropathy	M160.00
59107.0	Diagnosis of Psoriatic arthropathy	Psoriatic arthropathy	[X]Other psoriatic arthropathies	Nyu1300
96880.0	Diagnosis of Psoriatic arthropathy	Psoriatic arthropathy	Psoriatic arthritis	M160.11

C892/2923 Psoriatic arthropathy - Secondary care - Diagnoses - ICD10 codes

Rows: 5

Code	Description	Disease	Category
L40.5	Arthropathic psoriasis	Psoriatic arthropathy	Diagnosis of Psoriatic arthropathy
M07.0	Distal interphalangeal psoriatic arthropathy	Psoriatic arthropathy	Diagnosis of Psoriatic arthropathy
M07.1	Arthritis mutilans	Psoriatic arthropathy	Diagnosis of Psoriatic arthropathy
M07.2	Psoriatic spondylitis	Psoriatic arthropathy	Diagnosis of Psoriatic arthropathy
M07.3	Other psoriatic arthropathies	Psoriatic arthropathy	Diagnosis of Psoriatic arthropathy

API

To Export Phenotype Details:

Format	API
XML	site_root/api/v1/public/phenotypes/PH75/version/150/detail/?format=xml
JSON	site_root/api/v1/public/phenotypes/PH75/version/150/detail/?format=json
R Package	`# Download here library(ConceptLibraryClient) # Connect to API client = connect_to_API(public=TRUE) # Get details of phenotype details = get_phenotype_detail_by_version('PH75', '150', api_client=client)`

To Export Phenotype Code List:

Format	API
XML	site_root/api/v1/public/phenotypes/PH75/version/150/export/codes/?format=xml
JSON	site_root/api/v1/public/phenotypes/PH75/version/150/export/codes/?format=json
CSV	site_root/phenotypes/PH75/version/150/export/codes/
R Package	`# Download here library(ConceptLibraryClient) # Connect to API client = connect_to_API(public=TRUE) # Get codelists of phenotype codelists = get_phenotype_code_list('PH75', '150', api_client=client)`

Version History

Version ID	Name	Owner	Publish date
150	Psoriatic arthropathy	ieuan.scanlon	2021-10-06	currently shown