Acute Nasopharyngitis Primary care

Chukwuma Iwundu, Clare MacRae, Eleftheria Vasileiou

PH788 / 1655 Clinical-Coded Phenotype

  1. Overview

    Phenotype Type
    Disease or syndrome
    Phenotype UUID
    excel-breathe-idFGGYI
    Sex
    Both
    Valid Event Date Range
    01/01/2001 to 31/01/2021
    Coding System
    Read codes v2SNOMED CT codes
    Data Sources
    Hospital Episode Statistics Admitted Patient Care, UK Biobank, CPRD Aurum, Office of National Statistics (ONS), CPRD GOLD
    Collections
    BREATHEPhenotype Library
    Tags
    No data

  2. Definition

    • Not found code search
    • No validations available

  3. Implementation

    Implementation

    Not available

    Not found code search

  4. Clinical Code List

  5. Publication

    • No publications available

    • Code repositories

    • ID- 1 - Repository- Manchester ClinicalCodes - Description- Trends in antibiotic prescribing in primary care for clinical syndromes subject to national recommendations to reduce antibiotic resistance, UK 1995-2011: analysis of a large database of primary care consultations - Conditions- URTI - Publication- https://doi.org/10.1093/jac/dku291 - Clinical codes- Read Version 2

      (DOI:10.1093/jac/dku291)

    • ID- 2 - Repository- HDR UK National Phenomics Resource Project - Description- A chronological map of 308 physical and mental health conditions from 4 million individuals in the English National Health Service - Conditions- Ear and upper respiratory tract infections - Publication- https://doi.org/10.1016/S2589-7500(19)30012-3 - Clinical codes- ICD-10

      (DOI:10.1016/S2589-7500(19)30012-3)

    • ID- 3 - Repository- HDR UK National Phenomics Resource Project - Description- A chronological map of 308 physical and mental health conditions from 4 million individuals in the English National Health Service - Conditions- Other or unspecified infectious organisms - Publication- https://doi.org/10.1016/S2589-7500(19)30012-4 - Clinical codes- ICD-10

      (DOI:10.1016/S2589-7500(19)30012-4)

    Citation Example

    Chukwuma Iwundu, Clare MacRae, Eleftheria Vasileiou. PH788 / 1655 - Acute Nasopharyngitis Primary care. Phenotype Library [Online]. 17 January 2022. Available from: http://phenotypes.healthdatagateway.org/phenotypes/PH788/version/1655/detail/. [Accessed 26 April 2024]

  6. API

    To Export Phenotype Details:

    FormatAPI
    JSON site_root/api/v1/phenotypes/PH788/version/1655/detail/?format=json
    R Package

    # Download here

    library(ConceptLibraryClient)


    # Connect to API

    client = ConceptLibraryClient::Connection$new(public=TRUE)


    # Get details of phenotype

    phenotype_details = client$phenotypes$get_detail(
     'PH788',
     version_id=1655
    )

    Py Package

    # Download here

    from pyconceptlibraryclient import Client


    # Connect to API

    client = Client(public=True)


    # Get codelist of phenotype

    phenotype_codelist = client.phenotypes.get_detail(
     'PH788',
     version_id=1655
    )

    To Export Phenotype Code List:

    FormatAPI
    JSON site_root/api/v1/phenotypes/PH788/version/1655/export/codes/?format=json
    CSV site_root/phenotypes/PH788/version/1655/export/codes/
    R Package

    # Download here

    library(ConceptLibraryClient)


    # Connect to API

    client = ConceptLibraryClient::Connection$new(public=TRUE)


    # Get codelist of phenotype

    phenotype_codelist = client$phenotypes$get_codelist(
     'PH788',
     version_id=1655
    )

    Py Package

    # Download here

    from pyconceptlibraryclient import Client


    # Connect to API

    client = Client(public=True)


    # Get codelist of phenotype

    phenotype_codelist = client.phenotypes.get_codelist(
     'PH788',
     version_id=1655
    )

  7. Version History

    Version IDNameOwnerPublish date
    2212 Acute Nasopharyngitis Primary care zinnurar2022-08-08
    1655 Acute Nasopharyngitis Primary care zinnurar2022-01-17currently shown