Aspergillosis Primary care
Chukwuma Iwundu, Clare MacRae, Eleftheria Vasileiou
PH790 / 2214 Clinical-Coded Phenotype
Overview
Phenotype TypeDisease or syndromeSexBothValid Event Date Range01/01/2001 to 31/01/2021Coding SystemRead codes v2SNOMED CT codesCollectionsBREATHEPhenotype LibraryTagsNo dataDefinition
- Not found code search
- Not available
Implementation
Implementation
Not available
Not found code search
Clinical Code List
PUBLISHED - 23 Codes
PUBLISHED - 13 Codes
PUBLISHED - 12 Codes
PUBLISHED - 2 Codes
Publication
No publications were found via PubMed in the last 12 months
Code repositories
ID- 1 - Repository- HDR UK National Phenomics Resource Project - Description- A chronological map of 308 physical and mental health conditions from 4 million individuals in the English National Health Service - Conditions- B44.2 Tonsillar aspergillosis - Publication- https://portal.caliberresearch.org/phenotypes/kuan-ear-urti-gtxr2v6qtbyiemfrchdvzr - Clinical codes- B44.2 Tonsillar aspergillosis
ID- 2 - Repository- HDR UK National Phenomics Resource Project - Description- A chronological map of 308 physical and mental health conditions from 4 million individuals in the English National Health Service - Conditions- B44.7 Disseminated aspergillosis - Publication- https://portal.caliberresearch.org/phenotypes/kuan-oth-organs-7yqx9fgz3m2d6uckxu7b4q - Clinical codes- B44.7 Disseminated aspergillosis
ID- 3 - Repository- HDR UK National Phenomics Resource Project - Description- A chronological map of 308 physical and mental health conditions from 4 million individuals in the English National Health Service - Conditions- B44.8 Other forms of aspergillosis - Publication- https://portal.caliberresearch.org/phenotypes/kuan-oth-organs-7yqx9fgz3m2d6uckxu7b4q - Clinical codes- B44.8 Other forms of aspergillosis
ID- 4 - Repository- HDR UK National Phenomics Resource Project - Description- A chronological map of 308 physical and mental health conditions from 4 million individuals in the English National Health Service - Conditions- B44.9 Aspergillosis, unspecified - Publication- https://portal.caliberresearch.org/phenotypes/kuan-oth-organs-7yqx9fgz3m2d6uckxu7b4q - Clinical codes- B44.9 Aspergillosis, unspecified
ID- 5 - Repository- HDR UK National Phenomics Resource Project - Description- A chronological map of 308 physical and mental health conditions from 4 million individuals in the English National Health Service - Conditions- B44.0 Invasive pulmonary aspergillosis - Publication- https://portal.caliberresearch.org/phenotypes/kuan-lrti-rddq59rszjqvlptmk5vecd - Clinical codes- B44.0 Invasive pulmonary aspergillosis
ID- 6 - Repository- HDR UK National Phenomics Resource Project - Description- A chronological map of 308 physical and mental health conditions from 4 million individuals in the English National Health Service - Conditions- B44.1 Other pulmonary aspergillosis - Publication- https://portal.caliberresearch.org/phenotypes/kuan-lrti-rddq59rszjqvlptmk5vecd - Clinical codes- B44.1 Other pulmonary aspergillosis
ID- 7 - Repository- HDR UK National Phenomics Resource Project - Description- A chronological map of 308 physical and mental health conditions from 4 million individuals in the English National Health Service - Conditions- H246.00 Pneumonia with aspergillosis - Publication- https://portal.caliberresearch.org/phenotypes/axson-pneumonia-gl46c8plqmdpuj7qupteh9 - Clinical codes- H246.00 Pneumonia with aspergillosis
ID- 8 - Repository- LSHTM Data Compass - Description- Clinical codelist: Read codes and terms used for pneumonia (CPRD) - Conditions- H246.00,Pneumonia with aspergillosis - Publication- https://doi.org/10.17037/DATA.00001654 - Clinical codes- H246.00 Pneumonia with aspergillosis
(DOI:10.17037/DATA.00001654)
Citation Example
Chukwuma Iwundu, Clare MacRae, Eleftheria Vasileiou. PH790 / 2214 - Aspergillosis Primary care. Phenotype Library [Online]. 04 August 2022. Available from: http://phenotypes.healthdatagateway.org/phenotypes/PH790/version/2214/detail/. [Accessed 21 November 2024]
API
To Export Phenotype Details:
Format API JSON site_root/api/v1/phenotypes/PH790/version/2214/detail/?format=json R Package library(ConceptLibraryClient)
# Connect to API
client = ConceptLibraryClient::Connection$new(public=TRUE)
# Get details of phenotype
phenotype_details = client$phenotypes$get_detail(
'PH790',
version_id=2214
)Py Package from pyconceptlibraryclient import Client
# Connect to API
client = Client(public=True)
# Get codelist of phenotype
phenotype_codelist = client.phenotypes.get_detail(
'PH790',
version_id=2214
)To Export Phenotype Code List:
Format API JSON site_root/api/v1/phenotypes/PH790/version/2214/export/codes/?format=json CSV site_root/phenotypes/PH790/version/2214/export/codes/ R Package library(ConceptLibraryClient)
# Connect to API
client = ConceptLibraryClient::Connection$new(public=TRUE)
# Get codelist of phenotype
phenotype_codelist = client$phenotypes$get_codelist(
'PH790',
version_id=2214
)Py Package from pyconceptlibraryclient import Client
# Connect to API
client = Client(public=True)
# Get codelist of phenotype
phenotype_codelist = client.phenotypes.get_codelist(
'PH790',
version_id=2214
)Version History