Phenotypes > Bronchiolitis Secondary care

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Bronchiolitis Secondary care

Chukwuma Iwundu, Clare MacRae, Eleftheria Vasileiou

ID
PH793
Version ID
2217
Type
Disease or syndrome
Data Sources
Hospital Episode Statistics Admitted Patient Care , Civil Registration - Deaths , Annual District Death Extract , Patient Episode Dataset for Wales
Valid event data range
01/01/2001 to 31/01/2021
Sex
♀  Female ♂  Male
Agreement Date
2021-11-12
Coding system
ICD10 codes ICD11 codes
Collections
BREATHE Phenotype Library
Tags
No tags

Definition

  • Not found code search
  • Not available

Implementation

These codes are not intended to be mandatory, but are to be used as a starting point for the identification of Acute Bronchiolitis in routine Electronic Health Record (EHR). Each study may differ in the sensitivity and specificity of the coding required.

According to the National Health Service (NHS), Bronchiolitis is defined as a common lower respiratory tract infection that affects babies and young children under 2 years old.

https://www.nhs.uk/conditions/bronchiolitis/

According to the National Institute for Health and Care Excellence (NICE) guidelines, a Bronchiolitis diagnosis can me made if the child has a coryzal prodrome lasting 1 to 3 days, followed by: persistent cough and either tachypnoea or chest recession (or both) and either wheeze or crackles on chest auscultation (or both).

https://www.nice.org.uk/guidance/ng9/chapter/Key-priorities-for-implementation

It is therefore recommended that these codes are used for individuals with a respiratory tract infection restricted to lower respiratory tract in young children under 2 years old.

Not found code search


Publications

  • Publications in 2020-2021 identified in PubMed

  • Reyburn R, Tuivaga E, Nguyen CD, Ratu FT, Nand D, Kado J, Tikoduadua L, Jenkins K, de Campo M, Kama M, Devi R, Rafai E, Weinberger DM, Mulholland EK, Russell FM. Effect of ten-valent pneumococcal conjugate vaccine introduction on pneumonia hospital admissions in Fiji: a time-series analysis. Lancet Glob Health. 2021 Jan;9(1):e91-e98. doi: 10.1016/S2214-109X(20)30421-6. Epub 2020 Nov 20. PMID: 33227258.

  • Code repositories

  • ID- 1 - Repository- Manchester ClinicalCodes - Description- Acute bronchiolitis - Conditions- Acute Bronchiolitis - Publication- res52: respiratory tract infection ICD-10 - Clinical codes- J21

  • ID- 2 - Repository- Manchester ClinicalCodes - Description- Acute bronchiolitis due to respiratory syncytial virus - Conditions- Acute Bronchiolitis - Publication- res52: respiratory tract infection ICD-10 - Clinical codes- J21.0

  • ID- 3 - Repository- Manchester ClinicalCodes - Description- Acute bronchiolitis due to human metapneumovirus - Conditions- Acute Bronchiolitis - Publication- res52: respiratory tract infection ICD-10 - Clinical codes- J21.1

  • ID- 4 - Repository- Manchester ClinicalCodes - Description- Acute bronchiolitis due to other specified organisms - Conditions- Acute Bronchiolitis - Publication- res52: respiratory tract infection ICD-10 - Clinical codes- J21.8

  • ID- 5 - Repository- Manchester ClinicalCodes - Description- Acute bronchiolitis, unspecified - Conditions- Acute Bronchiolitis - Publication- res52: respiratory tract infecti - Clinical codes- J21.9

  • ID- 6 - Repository- Manchester ClinicalCodes - Description- Acute bronchitis and bronchiolitis - Conditions- Acute Bronchiolitis - Publication- res70: LRTI - Clinical codes- H06..00

  • ID- 7 - Repository- Manchester ClinicalCodes - Description- Acute bronchiolitis - Conditions- Acute Bronchiolitis - Publication- res70: LRTI - Clinical codes- H061.00

  • ID- 8 - Repository- Manchester ClinicalCodes - Description- Acute capillary bronchiolitis - Conditions- Acute Bronchiolitis - Publication- res70: LRTI - Clinical codes- H061000

  • ID- 9 - Repository- Manchester ClinicalCodes - Description- Acute bronchiolitis with bronchospasm - Conditions- Acute Bronchiolitis - Publication- res70: LRTI - Clinical codes- H061200

  • ID- 10 - Repository- Manchester ClinicalCodes - Description- Acute exudative bronchiolitis - Conditions- Acute Bronchiolitis - Publication- res70: LRTI - Clinical codes- H061300

  • ID- 11 - Repository- Manchester ClinicalCodes - Description- Acute bronchiolitis NOS - Conditions- Acute Bronchiolitis - Publication- res70: LRTI - Clinical codes- H061z00

  • ID- 12 - Repository- Manchester ClinicalCodes - Description- Acute bronchitis or bronchiolitis NOS - Conditions- Acute Bronchiolitis - Publication- res70: LRTI - Clinical codes- H06z.00

  • ID- 13 - Repository- HDR UK National Phenomics Resource Project - Description- Acute bronchiolitis - Conditions- Acute Bronchiolitis - Publication- Diagnosis of Lower Respiratory Tract Infections - Clinical codes- J21

  • ID- 14 - Repository- OpenSAFELY - Description- [X]Acute bronchiolitis due to other specified organisms - Conditions- Acute Bronchiolitis - Publication- CTV3Map_Code_And_Term - Clinical codes- Hyu11

  • ID- 15 - Repository- OpenSAFELY - Description- Acute bronchiolitis - Conditions- Acute Bronchiolitis - Publication- CTV3Map_Code_And_Term - Clinical codes- H061.

  • ID- 16 - Repository- OpenSAFELY - Description- Acute bronchiolitis due to adenovirus - Conditions- Acute Bronchiolitis - Publication- CTV3_Children - Clinical codes- X100D

  • ID- 17 - Repository- OpenSAFELY - Description- Acute bronchiolitis due to human metapneumovirus - Conditions- Acute Bronchiolitis - Publication- CTV3_Children - Clinical codes- XaYYt

  • ID- 18 - Repository- OpenSAFELY - Description- Acute bronchiolitis due to other specified organisms - Conditions- Acute Bronchiolitis - Publication- CTV3Map_Code_And_Term - Clinical codes- H0616

  • ID- 19 - Repository- OpenSAFELY - Description- Acute bronchiolitis due to respiratory syncytial virus - Conditions- Acute Bronchiolitis - Publication- CTV3Map_Code_And_Term - Clinical codes- H0615

  • ID- 20 - Repository- OpenSAFELY - Description- Acute bronchiolitis NOS - Conditions- Acute Bronchiolitis - Publication- CTV3Map_Code_And_Term - Clinical codes- H061z

  • ID- 21 - Repository- OpenSAFELY - Description- Acute bronchiolitis with bronchospasm - Conditions- Acute Bronchiolitis - Publication- CTV3Map_Code_And_Term - Clinical codes- H0612

  • ID- 22 - Repository- OpenSAFELY - Description- Acute bronchitis and bronchiolitis - Conditions- Acute Bronchiolitis - Publication- CTV3Map_Code_And_Term - Clinical codes- H06..

  • ID- 23 - Repository- OpenSAFELY - Description- Acute bronchitis or bronchiolitis NOS - Conditions- Acute Bronchiolitis - Publication- CTV3Map_Code_And_Term - Clinical codes- H06z.

  • ID- 24 - Repository- OpenSAFELY - Description- Acute capillary bronchiolitis - Conditions- Acute Bronchiolitis - Publication- CTV3Map_Code_And_Term - Clinical codes- H0610

  • ID- 25 - Repository- OpenSAFELY - Description- Acute exudative bronchiolitis - Conditions- Acute Bronchiolitis - Publication- CTV3Map_Code_And_Term - Clinical codes- H0613

  • ID- 26 - Repository- OpenSAFELY - Description- Acute obliterating bronchiolitis - Conditions- Acute Bronchiolitis - Publication- CTV3Map_Code_And_Term - Clinical codes- H0611

  • ID- 27 - Repository- OpenSAFELY - Description- Acute viral bronchiolitis - Conditions- Acute Bronchiolitis - Publication- CTV3_Children - Clinical codes- X100C

  • ID- 28 - Repository- OpenSAFELY - Description- Bronchiolitis obliterans - Conditions- Acute Bronchiolitis - Publication- CTV3Map_Code_And_Term - Clinical codes- X101l

  • ID- 29 - Repository- OpenSAFELY - Description- Bronchiolitis obliterans with usual interstitial pneumonitis - Conditions- Acute Bronchiolitis - Publication- CTV3_Children - Clinical codes- X102z

Clinical Code List

Expand All  /  Collapse All
Rows: 2
Code Description BREATHE recommended
CA41.0 Acute bronchiolitis due to respiratory syncytial virus Y
CA41.Z Acute bronchiolitis, unspecified Y
Rows: 5
Code Description BREATHE recommended Afonso et al, 2013 Diaz et al, 2016 Troeger et al, 2018 Reyburn et al, 2020 Manchester Clinical Codes HDR UK National Phenomics Resource Project
J21 Acute bronchiolitis Y Y Y Y Y Y Y
J21.0 Acute bronchiolitis due to respiratory syncytial virus Y N N Y N Y N
J21.1 Acute bronchiolitis due to human metapneumovirus Y N N Y N Y N
J21.8 Acute bronchiolitis due to other specified organisms Y N N Y N Y N
J21.9 Acute bronchiolitis, unspecified Y N N Y N Y N
Rows: 2
Code Description
CA41.0 Acute bronchiolitis due to respiratory syncytial virus
CA41.Z Acute bronchiolitis, unspecified
Rows: 5
Code Description
J21 Acute bronchiolitis
J21.0 Acute bronchiolitis due to respiratory syncytial virus
J21.1 Acute bronchiolitis due to human metapneumovirus
J21.8 Acute bronchiolitis due to other specified organisms
J21.9 Acute bronchiolitis, unspecified

API

To Export Phenotype Details:

Format API
XML site_root/api/v1/public/phenotypes/PH793/version/2217/detail/?format=xml
JSON site_root/api/v1/public/phenotypes/PH793/version/2217/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of phenotype

details = get_phenotype_detail_by_version('PH793', '2217', api_client=client)

To Export Phenotype Code List:

Format API
XML site_root/api/v1/public/phenotypes/PH793/version/2217/export/codes/?format=xml
JSON site_root/api/v1/public/phenotypes/PH793/version/2217/export/codes/?format=json
CSV site_root/phenotypes/PH793/version/2217/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelists of phenotype

codelists = get_phenotype_code_list('PH793', '2217', api_client=client)

Version History

Version
ID		 Name Owner Publish date
2217 Bronchiolitis Secondary care zinnurar 2022-08-08 currently shown
1665 Bronchiolitis Secondary care zinnurar 2022-01-17

Export - export all codes into a csv file/JSON/XML for the current phenotype version.

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