Phenotypes > Rheumatoid Arthritis

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Rheumatoid Arthritis

Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A

ID
PH80
Version ID
160
Type
Disease or Syndrome
Data Sources
CPRD GOLD , HES Admitted Patient Care data for CPRD GOLD
Valid event data range
01/01/1999 - 01/07/2016
Sex
♀  Female ♂  Male
Agreement Date
2019-05-20
Coding system
Read codes v2 ICD10 codes Med codes
Collections
CALIBER Phenotype Library
Tags
No tags

Definition

At the specified date, a patient is defined as having had 'Rheumatoid Arthritis' IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:

Primary care

  1. 'Rheumatoid Arthritis' diagnosis or history of diagnosis during a consultation

OR Secondary care (ICD10)

  1. ALL diagnoses of 'Rheumatoid Arthritis' or history of diagnosis during a hospitalization

Implementation


https://kclhi.org/phenoflow/phenotype/download/235

Publications

  • Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3

Clinical Code List

Expand All  /  Collapse All
Rows: 64
Code Description Disease Medcode Category
14G1.00 H/O: rheumatoid arthritis Rheumatoid Arthritis 6639.0 History of Rheumatoid Arthritis
2G25.00 O/E - hands - ulnar deviation Rheumatoid Arthritis 56232.0 Diagnosis of Rheumatoid Arthritis
2G25.11 O/E - ulnar deviation Rheumatoid Arthritis 36678.0 Diagnosis of Rheumatoid Arthritis
2G27.00 O/E-hands-rheumatoid spindling Rheumatoid Arthritis 33264.0 Diagnosis of Rheumatoid Arthritis
66H..13 Rheumatoid arthrit. monitoring Rheumatoid Arthritis 17412.0 History of Rheumatoid Arthritis
7P20300 Delivery of rehabilitation for rheumatoid arthritis Rheumatoid Arthritis 102088.0 History of Rheumatoid Arthritis
9mM..00 Rheumatoid arthritis monitoring invitation Rheumatoid Arthritis 107340.0 History of Rheumatoid Arthritis
9mM0.00 Rheumatoid arthritis monitoring invitation first letter Rheumatoid Arthritis 107435.0 History of Rheumatoid Arthritis
9mM1.00 Rheumatoid arthritis monitoring invitation second letter Rheumatoid Arthritis 107575.0 History of Rheumatoid Arthritis
9mM2.00 Rheumatoid arthritis monitoring invitation third letter Rheumatoid Arthritis 107676.0 History of Rheumatoid Arthritis
9mM3.00 Rheumatoid arthritis monitoring verbal invitation Rheumatoid Arthritis 107606.0 History of Rheumatoid Arthritis
9mM4.00 Rheumatoid arthritis monitoring telephone invitation Rheumatoid Arthritis 107797.0 History of Rheumatoid Arthritis
F371200 Polyneuropathy in rheumatoid arthritis Rheumatoid Arthritis 62401.0 Diagnosis of Rheumatoid Arthritis
F396400 Myopathy due to rheumatoid arthritis Rheumatoid Arthritis 31209.0 Diagnosis of Rheumatoid Arthritis
G5y8.00 Rheumatoid myocarditis Rheumatoid Arthritis 49787.0 Diagnosis of Rheumatoid Arthritis
G5yA.00 Rheumatoid carditis Rheumatoid Arthritis 43816.0 Diagnosis of Rheumatoid Arthritis
H570.00 Rheumatoid lung Rheumatoid Arthritis 9954.0 Diagnosis of Rheumatoid Arthritis
N005.00 Adult Still's Disease Rheumatoid Arthritis 23834.0 Diagnosis of Rheumatoid Arthritis
N04..00 Rheumatoid arthritis and other inflammatory polyarthropathy Rheumatoid Arthritis 27603.0 Diagnosis of Rheumatoid Arthritis
N040.00 Rheumatoid arthritis Rheumatoid Arthritis 844.0 Diagnosis of Rheumatoid Arthritis
N040000 Rheumatoid arthritis of cervical spine Rheumatoid Arthritis 44743.0 Diagnosis of Rheumatoid Arthritis
N040100 Other rheumatoid arthritis of spine Rheumatoid Arthritis 44203.0 Diagnosis of Rheumatoid Arthritis
N040200 Rheumatoid arthritis of shoulder Rheumatoid Arthritis 21358.0 Diagnosis of Rheumatoid Arthritis
N040300 Rheumatoid arthritis of sternoclavicular joint Rheumatoid Arthritis 107963.0 Diagnosis of Rheumatoid Arthritis
N040400 Rheumatoid arthritis of acromioclavicular joint Rheumatoid Arthritis 100914.0 Diagnosis of Rheumatoid Arthritis
N040500 Rheumatoid arthritis of elbow Rheumatoid Arthritis 59738.0 Diagnosis of Rheumatoid Arthritis
N040600 Rheumatoid arthritis of distal radio-ulnar joint Rheumatoid Arthritis 63365.0 Diagnosis of Rheumatoid Arthritis
N040700 Rheumatoid arthritis of wrist Rheumatoid Arthritis 48832.0 Diagnosis of Rheumatoid Arthritis
N040800 Rheumatoid arthritis of MCP joint Rheumatoid Arthritis 42299.0 Diagnosis of Rheumatoid Arthritis
N040900 Rheumatoid arthritis of PIP joint of finger Rheumatoid Arthritis 41941.0 Diagnosis of Rheumatoid Arthritis
N040A00 Rheumatoid arthritis of DIP joint of finger Rheumatoid Arthritis 63198.0 Diagnosis of Rheumatoid Arthritis
N040B00 Rheumatoid arthritis of hip Rheumatoid Arthritis 49067.0 Diagnosis of Rheumatoid Arthritis
N040C00 Rheumatoid arthritis of sacro-iliac joint Rheumatoid Arthritis 100776.0 Diagnosis of Rheumatoid Arthritis
N040D00 Rheumatoid arthritis of knee Rheumatoid Arthritis 50863.0 Diagnosis of Rheumatoid Arthritis
N040E00 Rheumatoid arthritis of tibio-fibular joint Rheumatoid Arthritis 107791.0 Diagnosis of Rheumatoid Arthritis
N040F00 Rheumatoid arthritis of ankle Rheumatoid Arthritis 51239.0 Diagnosis of Rheumatoid Arthritis
N040G00 Rheumatoid arthritis of subtalar joint Rheumatoid Arthritis 73619.0 Diagnosis of Rheumatoid Arthritis
N040H00 Rheumatoid arthritis of talonavicular joint Rheumatoid Arthritis 70658.0 Diagnosis of Rheumatoid Arthritis
N040J00 Rheumatoid arthritis of other tarsal joint Rheumatoid Arthritis 71784.0 Diagnosis of Rheumatoid Arthritis
N040K00 Rheumatoid arthritis of 1st MTP joint Rheumatoid Arthritis 51238.0 Diagnosis of Rheumatoid Arthritis
N040L00 Rheumatoid arthritis of lesser MTP joint Rheumatoid Arthritis 99414.0 Diagnosis of Rheumatoid Arthritis
N040M00 Rheumatoid arthritis of IP joint of toe Rheumatoid Arthritis 107112.0 Diagnosis of Rheumatoid Arthritis
N040N00 Rheumatoid vasculitis Rheumatoid Arthritis 30548.0 Diagnosis of Rheumatoid Arthritis
N040P00 Seronegative rheumatoid arthritis Rheumatoid Arthritis 6916.0 Diagnosis of Rheumatoid Arthritis
N040Q00 Rheumatoid bursitis Rheumatoid Arthritis 18155.0 Diagnosis of Rheumatoid Arthritis
N040R00 Rheumatoid nodule Rheumatoid Arthritis 53621.0 Diagnosis of Rheumatoid Arthritis
N040S00 Rheumatoid arthritis - multiple joint Rheumatoid Arthritis 31054.0 Diagnosis of Rheumatoid Arthritis
N040T00 Flare of rheumatoid arthritis Rheumatoid Arthritis 8350.0 Diagnosis of Rheumatoid Arthritis
N041.00 Felty's syndrome Rheumatoid Arthritis 23552.0 Diagnosis of Rheumatoid Arthritis
N042.00 Other rheumatoid arthropathy + visceral/systemic involvement Rheumatoid Arthritis 49227.0 Diagnosis of Rheumatoid Arthritis
N042100 Rheumatoid lung disease Rheumatoid Arthritis 46436.0 Diagnosis of Rheumatoid Arthritis
N042200 Rheumatoid nodule Rheumatoid Arthritis 5723.0 Diagnosis of Rheumatoid Arthritis
N042z00 Rheumatoid arthropathy + visceral/systemic involvement NOS Rheumatoid Arthritis 37431.0 Diagnosis of Rheumatoid Arthritis
N047.00 Seropositive errosive rheumatoid arthritis Rheumatoid Arthritis 9707.0 Diagnosis of Rheumatoid Arthritis
N04X.00 Seropositive rheumatoid arthritis Rheumatoid Arthritis 12019.0 Diagnosis of Rheumatoid Arthritis
N04y000 Rheumatoid lung Rheumatoid Arthritis 31724.0 Diagnosis of Rheumatoid Arthritis
N04y011 Caplan's syndrome Rheumatoid Arthritis 56838.0 Diagnosis of Rheumatoid Arthritis
N04y012 Fibrosing alveolitis associated with rheumatoid arthritis Rheumatoid Arthritis 28853.0 Diagnosis of Rheumatoid Arthritis
N04y200 Adult-onset Still's disease Rheumatoid Arthritis 32001.0 Diagnosis of Rheumatoid Arthritis
N362200 Swan-neck finger deformity Rheumatoid Arthritis 21635.0 Diagnosis of Rheumatoid Arthritis
Nyu1000 [X]Rheumatoid arthritis+involvement/other organs or systems Rheumatoid Arthritis 106440.0 Diagnosis of Rheumatoid Arthritis
Nyu1100 [X]Other seropositive rheumatoid arthritis Rheumatoid Arthritis 93715.0 Diagnosis of Rheumatoid Arthritis
Nyu1200 [X]Other specified rheumatoid arthritis Rheumatoid Arthritis 70221.0 Diagnosis of Rheumatoid Arthritis
Nyu1G00 [X]Seropositive rheumatoid arthritis unspecified Rheumatoid Arthritis 56202.0 Diagnosis of Rheumatoid Arthritis
Rows: 64
Code Description Disease ReadcodeDescr Readcode
100776.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Rheumatoid arthritis of sacro-iliac joint N040C00
100914.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Rheumatoid arthritis of acromioclavicular joint N040400
102088.0 History of Rheumatoid Arthritis Rheumatoid Arthritis Delivery of rehabilitation for rheumatoid arthritis 7P20300
106440.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis [X]Rheumatoid arthritis+involvement/other organs or systems Nyu1000
107112.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Rheumatoid arthritis of IP joint of toe N040M00
107340.0 History of Rheumatoid Arthritis Rheumatoid Arthritis Rheumatoid arthritis monitoring invitation 9mM..00
107435.0 History of Rheumatoid Arthritis Rheumatoid Arthritis Rheumatoid arthritis monitoring invitation first letter 9mM0.00
107575.0 History of Rheumatoid Arthritis Rheumatoid Arthritis Rheumatoid arthritis monitoring invitation second letter 9mM1.00
107606.0 History of Rheumatoid Arthritis Rheumatoid Arthritis Rheumatoid arthritis monitoring verbal invitation 9mM3.00
107676.0 History of Rheumatoid Arthritis Rheumatoid Arthritis Rheumatoid arthritis monitoring invitation third letter 9mM2.00
107791.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Rheumatoid arthritis of tibio-fibular joint N040E00
107797.0 History of Rheumatoid Arthritis Rheumatoid Arthritis Rheumatoid arthritis monitoring telephone invitation 9mM4.00
107963.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Rheumatoid arthritis of sternoclavicular joint N040300
12019.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Seropositive rheumatoid arthritis N04X.00
17412.0 History of Rheumatoid Arthritis Rheumatoid Arthritis Rheumatoid arthrit. monitoring 66H..13
18155.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Rheumatoid bursitis N040Q00
21358.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Rheumatoid arthritis of shoulder N040200
21635.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Swan-neck finger deformity N362200
23552.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Felty's syndrome N041.00
23834.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Adult Still's Disease N005.00
27603.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Rheumatoid arthritis and other inflammatory polyarthropathy N04..00
28853.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Fibrosing alveolitis associated with rheumatoid arthritis N04y012
30548.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Rheumatoid vasculitis N040N00
31054.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Rheumatoid arthritis - multiple joint N040S00
31209.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Myopathy due to rheumatoid arthritis F396400
31724.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Rheumatoid lung N04y000
32001.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Adult-onset Still's disease N04y200
33264.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis O/E-hands-rheumatoid spindling 2G27.00
36678.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis O/E - ulnar deviation 2G25.11
37431.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Rheumatoid arthropathy + visceral/systemic involvement NOS N042z00
41941.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Rheumatoid arthritis of PIP joint of finger N040900
42299.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Rheumatoid arthritis of MCP joint N040800
43816.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Rheumatoid carditis G5yA.00
44203.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Other rheumatoid arthritis of spine N040100
44743.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Rheumatoid arthritis of cervical spine N040000
46436.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Rheumatoid lung disease N042100
48832.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Rheumatoid arthritis of wrist N040700
49067.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Rheumatoid arthritis of hip N040B00
49227.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Other rheumatoid arthropathy + visceral/systemic involvement N042.00
49787.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Rheumatoid myocarditis G5y8.00
50863.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Rheumatoid arthritis of knee N040D00
51238.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Rheumatoid arthritis of 1st MTP joint N040K00
51239.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Rheumatoid arthritis of ankle N040F00
53621.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Rheumatoid nodule N040R00
56202.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis [X]Seropositive rheumatoid arthritis unspecified Nyu1G00
56232.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis O/E - hands - ulnar deviation 2G25.00
56838.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Caplan's syndrome N04y011
5723.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Rheumatoid nodule N042200
59738.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Rheumatoid arthritis of elbow N040500
62401.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Polyneuropathy in rheumatoid arthritis F371200
63198.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Rheumatoid arthritis of DIP joint of finger N040A00
63365.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Rheumatoid arthritis of distal radio-ulnar joint N040600
6639.0 History of Rheumatoid Arthritis Rheumatoid Arthritis H/O: rheumatoid arthritis 14G1.00
6916.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Seronegative rheumatoid arthritis N040P00
70221.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis [X]Other specified rheumatoid arthritis Nyu1200
70658.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Rheumatoid arthritis of talonavicular joint N040H00
71784.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Rheumatoid arthritis of other tarsal joint N040J00
73619.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Rheumatoid arthritis of subtalar joint N040G00
8350.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Flare of rheumatoid arthritis N040T00
844.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Rheumatoid arthritis N040.00
93715.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis [X]Other seropositive rheumatoid arthritis Nyu1100
9707.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Seropositive errosive rheumatoid arthritis N047.00
99414.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Rheumatoid arthritis of lesser MTP joint N040L00
9954.0 Diagnosis of Rheumatoid Arthritis Rheumatoid Arthritis Rheumatoid lung H570.00
Rows: 3
Code Description Disease Category
J99.0 Rheumatoid lung disease Rheumatoid Arthritis Diagnosis of Rheumatoid Arthritis
M05 Seropositive rheumatoid arthritis Rheumatoid Arthritis Diagnosis of Rheumatoid Arthritis
M06 Other rheumatoid arthritis Rheumatoid Arthritis Diagnosis of Rheumatoid Arthritis

API

To Export Phenotype Details:

Format API
XML site_root/api/v1/public/phenotypes/PH80/version/160/detail/?format=xml
JSON site_root/api/v1/public/phenotypes/PH80/version/160/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of phenotype

details = get_phenotype_detail_by_version('PH80', '160', api_client=client)

To Export Phenotype Code List:

Format API
XML site_root/api/v1/public/phenotypes/PH80/version/160/export/codes/?format=xml
JSON site_root/api/v1/public/phenotypes/PH80/version/160/export/codes/?format=json
CSV site_root/phenotypes/PH80/version/160/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelists of phenotype

codelists = get_phenotype_code_list('PH80', '160', api_client=client)

Version History

Version
ID		 Name Owner Publish date
160 Rheumatoid Arthritis ieuan.scanlon 2021-10-06 currently shown

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