Phenotypes > Sinusitis Primary care

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Sinusitis Primary care

Chukwuma Iwundu, Clare MacRae, Eleftheria Vasileiou

ID
PH812
Version ID
2246
Type
Disease or syndrome
Data Sources
Welsh Longitudinal General Practice Dataset (WLGP) , Clinical Practice Research Datalink AURUM , Clinical Practice Research Datalink GOLD
Valid event data range
01/01/2001 to 31/01/2021
Sex
♀  Female ♂  Male
Agreement Date
2022-01-21
Coding system
Read codes v2 SNOMED CT codes
Collections
BREATHE Phenotype Library
Tags
No tags

Definition

The aim of this research work was to identify relevant diagnosis codes available in routine electronic health records from primary and secondary care settings in the UK. We looked for relevant codes in code repositories such as the University of Cambrigdge Primary Care Unit, Manchester Clinical Codes, HDR UK National Phenomics Resource Project, Oxford-RCGP RSC, OpenSAFELY and LSHTM Data Compass. We also searched for peer-reviewed studies published via PubMed in the last 12 months for any relevant codes. Please note that these codes are not intended to be mandatory, but are to be used as a starting point for the identification of Sinusitis in routine electronic health record. Therefore, each study may differ in the sensitivity and specificity of the coding required. - No validations available

Implementation

According to NHS, sinusitis is swelling of the sinuses, usually caused by an infection. It's common and usually clears up on its own within 2 to 3 weeks.

https://www.nhs.uk/conditions/sinusitis-sinus-infection/

According to NICE guidelines, sinusitis is defined as a symptomatic inflammation of the paranasal sinuses.

https://cks.nice.org.uk/topics/sinusitis/background-information/definition/

Not found code search


Publications

  • No publications idenified via Pubmed in the last 12 months

Clinical Code List

Expand All  /  Collapse All
Rows: 5
Code Description SNOMED CT Concept ID Read v2 SNOMED CT Description ID BREATHE recommended
301014014 Other acute sinusitis NOS 15805002 H01yz00 26785019 Y
301015010 Acute sinusitis NOS 15805002 H01z.00 26785019 Y
301213013 Other chronic sinusitis NOS 40055000 H13yz00 66718013 Y
301214019 Chronic sinusitis NOS 40055000 H13z.00 66718013 Y
3183591000006110 Bronchiectasis, chronic sinusitis AND dextrocardia syndrome 42402006 70751013 Y
Rows: 4
Code Description CPRD GOLD Med BREATHE recommended
H01yz00 Other acute sinusitis NOS 60733 Y
H01z.00 Acute sinusitis NOS 33664 Y
H13yz00 Other chronic sinusitis NOS 54375 N
H13z.00 Chronic sinusitis NOS 5437 N
Rows: 5
Code Description
301014014 Other acute sinusitis NOS
301015010 Acute sinusitis NOS
301213013 Other chronic sinusitis NOS
301214019 Chronic sinusitis NOS
3183591000006110 Bronchiectasis, chronic sinusitis AND dextrocardia syndrome
Rows: 2
Code Description
H01yz00 Other acute sinusitis NOS
H01z.00 Acute sinusitis NOS

API

To Export Phenotype Details:

Format API
XML site_root/api/v1/public/phenotypes/PH812/version/2246/detail/?format=xml
JSON site_root/api/v1/public/phenotypes/PH812/version/2246/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of phenotype

details = get_phenotype_detail_by_version('PH812', '2246', api_client=client)

To Export Phenotype Code List:

Format API
XML site_root/api/v1/public/phenotypes/PH812/version/2246/export/codes/?format=xml
JSON site_root/api/v1/public/phenotypes/PH812/version/2246/export/codes/?format=json
CSV site_root/phenotypes/PH812/version/2246/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelists of phenotype

codelists = get_phenotype_code_list('PH812', '2246', api_client=client)

Version History

Version
ID		 Name Owner Publish date
2246 Sinusitis Primary care zinnurar 2022-08-09 currently shown
1703 Sinusitis Primary care zinnurar 2022-01-21

Export - export all codes into a csv file/JSON/XML for the current phenotype version.

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