Phenotypes > Trancheitis Secondary care

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Trancheitis Secondary care

Chukwuma Iwundu, Clare MacRae, Eleftheria Vasileiou

ID
PH817
Version ID
2251
Type
Disease or syndrome
Data Sources
Hospital Episode Statistics Admitted Patient Care , Civil Registration - Deaths , Annual District Death Extract , Patient Episode Dataset for Wales
Valid event data range
01/01/2001 to 31/01/2021
Sex
♀  Female ♂  Male
Agreement Date
2022-01-21
Coding system
ICD10 codes ICD11 codes
Collections
BREATHE Phenotype Library
Tags
No tags

Definition

The aim of this research work was to identify relevant diagnosis codes available in routine electronic health records from primary and secondary care settings in the UK. We looked for relevant codes in code repositories such as the University of Cambrigdge Primary Care Unit, Manchester Clinical Codes, HDR UK National Phenomics Resource Project, Oxford-RCGP RSC, OpenSAFELY and LSHTM Data Compass. We also searched for peer-reviewed studies published via PubMed in the last 12 months for any relevant codes. Please note that these codes are not intended to be mandatory, but are to be used as a starting point for the identification of Trancheitis in routine electronic health record. Therefore, each study may differ in the sensitivity and specificity of the coding required. - No validation available

Implementation

Not found code search


Publications

  • No publications idenified via Pubmed in the last 12 months

Clinical Code List

Expand All  /  Collapse All
Rows: 4
Code Description BREATHE recommended
CA05.1 Acute tracheitis Y
CA05.2 Acute laryngotracheitis Y
CA05.Z Acute laryngitis or tracheitis, unspecified Y
CA0G Chronic laryngitis or laryngotracheitis Y
Rows: 5
Code Description BREATHE recommended
J04 Acute laryngitis and tracheitis Y
J04.1 Acute tracheitis Y
J04.2 Acute laryngotracheitis Y
J37 Chronic laryngitis and laryngotracheitis Y
J37.1 Chronic laryngotracheitis Y
Rows: 4
Code Description
CA05.1 Acute tracheitis
CA05.2 Acute laryngotracheitis
CA05.Z Acute laryngitis or tracheitis, unspecified
CA0G Chronic laryngitis or laryngotracheitis
Rows: 5
Code Description
J04 Acute laryngitis and tracheitis
J04.1 Acute tracheitis
J04.2 Acute laryngotracheitis
J37 Chronic laryngitis and laryngotracheitis
J37.1 Chronic laryngotracheitis

API

To Export Phenotype Details:

Format API
XML site_root/api/v1/public/phenotypes/PH817/version/2251/detail/?format=xml
JSON site_root/api/v1/public/phenotypes/PH817/version/2251/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of phenotype

details = get_phenotype_detail_by_version('PH817', '2251', api_client=client)

To Export Phenotype Code List:

Format API
XML site_root/api/v1/public/phenotypes/PH817/version/2251/export/codes/?format=xml
JSON site_root/api/v1/public/phenotypes/PH817/version/2251/export/codes/?format=json
CSV site_root/phenotypes/PH817/version/2251/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelists of phenotype

codelists = get_phenotype_code_list('PH817', '2251', api_client=client)

Version History

Version
ID		 Name Owner Publish date
2251 Trancheitis Secondary care zinnurar 2022-08-09 currently shown
1713 Trancheitis Secondary care zinnurar 2022-01-21

Export - export all codes into a csv file/JSON/XML for the current phenotype version.

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